View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10580_low_17 (Length: 277)
Name: NF10580_low_17
Description: NF10580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10580_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 77 - 262
Target Start/End: Complemental strand, 12874374 - 12874189
Alignment:
| Q |
77 |
tccttaacccttcaatgctatttgcacccccaaataccaaagaaaaacaatgtcatgatacatcttttctaccatgtcaagttactaacataccctcaga |
176 |
Q |
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| T |
12874374 |
tccttaacccttcaatgctatttgcacccccaaataccaaagaaaaacaatgtcatgatacatcttttctaccatgtcaagttactaacataccctcaga |
12874275 |
T |
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| Q |
177 |
gttcatatggcctgagcatgaaaaaccatgtcttacaccaccaaaacttcaagttccaccaattgacttaaaagcttttctctctg |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
12874274 |
gttcatatggcctgagcatgaaaaaccatgtcttacaccaccaaaacttcaagttccaccaattgacttaaaagcctttctctctg |
12874189 |
T |
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