View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10580_low_2 (Length: 450)

Name: NF10580_low_2
Description: NF10580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10580_low_2
NF10580_low_2
[»] chr8 (18 HSPs)
chr8 (17-337)||(16083145-16083465)
chr8 (88-337)||(16084623-16084872)
chr8 (88-337)||(16086030-16086279)
chr8 (88-337)||(16087437-16087686)
chr8 (201-355)||(26908355-26908508)
chr8 (52-154)||(26908255-26908357)
chr8 (321-401)||(36598460-36598539)
chr8 (324-401)||(36602652-36602728)
chr8 (287-337)||(14366314-14366364)
chr8 (287-337)||(2269-2319)
chr8 (287-337)||(14673544-14673594)
chr8 (287-337)||(17007967-17008017)
chr8 (287-337)||(17540933-17540983)
chr8 (287-337)||(21408541-21408591)
chr8 (287-337)||(21803033-21803083)
chr8 (287-355)||(18973353-18973420)
chr8 (287-355)||(25502741-25502808)
chr8 (295-337)||(31709085-31709127)
[»] scaffold0438 (1 HSPs)
scaffold0438 (17-317)||(3533-3845)
[»] chr2 (6 HSPs)
chr2 (201-337)||(23692914-23693049)
chr2 (342-406)||(3071723-3071787)
chr2 (287-358)||(8998208-8998278)
chr2 (294-355)||(8164820-8164880)
chr2 (106-154)||(23693047-23693095)
chr2 (287-337)||(29603679-29603729)
[»] chr1 (9 HSPs)
chr1 (201-337)||(24280757-24280893)
chr1 (201-337)||(20442689-20442826)
chr1 (287-358)||(555320-555390)
chr1 (244-337)||(33295756-33295849)
chr1 (287-358)||(19913710-19913780)
chr1 (287-337)||(15157978-15158028)
chr1 (106-154)||(24280711-24280759)
chr1 (287-337)||(20195029-20195079)
chr1 (106-154)||(20442824-20442872)
[»] chr3 (15 HSPs)
chr3 (22-337)||(18556827-18557141)
chr3 (310-406)||(10815828-10815923)
chr3 (329-406)||(10812946-10813022)
chr3 (342-401)||(38700290-38700349)
chr3 (257-355)||(2689171-2689268)
chr3 (287-337)||(8856861-8856911)
chr3 (287-337)||(26907105-26907155)
chr3 (289-337)||(17593862-17593910)
chr3 (287-358)||(19808283-19808353)
chr3 (287-358)||(20012381-20012451)
chr3 (287-337)||(10776770-10776820)
chr3 (287-337)||(12209009-12209059)
chr3 (287-337)||(14429998-14430048)
chr3 (287-337)||(103304-103354)
chr3 (287-337)||(15417908-15417958)
[»] scaffold0037 (1 HSPs)
scaffold0037 (287-401)||(20438-20552)
[»] scaffold0001 (2 HSPs)
scaffold0001 (342-405)||(30243-30306)
scaffold0001 (342-405)||(35550-35613)
[»] chr6 (13 HSPs)
chr6 (342-408)||(25970239-25970305)
chr6 (342-408)||(25974679-25974745)
chr6 (342-406)||(13728572-13728636)
chr6 (342-406)||(17996800-17996864)
chr6 (329-401)||(18929353-18929424)
chr6 (342-406)||(13727218-13727282)
chr6 (321-401)||(19008445-19008524)
chr6 (287-355)||(4282691-4282758)
chr6 (287-358)||(22622496-22622566)
chr6 (287-337)||(11231489-11231539)
chr6 (287-337)||(19577181-19577231)
chr6 (294-355)||(34336038-34336098)
chr6 (287-355)||(11694902-11694969)
[»] chr7 (12 HSPs)
chr7 (342-406)||(11100261-11100325)
chr7 (287-389)||(550577-550676)
chr7 (287-358)||(15834890-15834960)
chr7 (287-355)||(362047-362114)
chr7 (287-355)||(12538378-12538445)
chr7 (287-337)||(11527507-11527557)
chr7 (287-337)||(15932185-15932235)
chr7 (287-337)||(23532411-23532461)
chr7 (287-358)||(5332454-5332524)
chr7 (287-337)||(9066540-9066590)
chr7 (310-355)||(37282829-37282874)
chr7 (293-337)||(783719-783763)
[»] scaffold0123 (1 HSPs)
scaffold0123 (328-406)||(8686-8763)
[»] scaffold1555 (1 HSPs)
scaffold1555 (324-401)||(1451-1527)
[»] chr5 (4 HSPs)
chr5 (287-358)||(40572204-40572274)
chr5 (287-337)||(20679842-20679892)
chr5 (272-337)||(20817727-20817792)
chr5 (376-408)||(20680149-20680181)
[»] chr4 (8 HSPs)
chr4 (287-355)||(722897-722964)
chr4 (287-337)||(10755146-10755196)
chr4 (287-337)||(10968915-10968965)
chr4 (289-337)||(22751900-22751948)
chr4 (287-337)||(20494757-20494807)
chr4 (287-337)||(23878892-23878942)
chr4 (409-443)||(45400795-45400829)
chr4 (376-408)||(28924698-28924730)
[»] scaffold0264 (1 HSPs)
scaffold0264 (286-337)||(12905-12956)
[»] scaffold0013 (1 HSPs)
scaffold0013 (287-337)||(135685-135735)
[»] scaffold0045 (1 HSPs)
scaffold0045 (293-337)||(78859-78903)
[»] scaffold0018 (1 HSPs)
scaffold0018 (287-335)||(194779-194827)
[»] scaffold1778 (1 HSPs)
scaffold1778 (287-337)||(869-919)
[»] scaffold0130 (1 HSPs)
scaffold0130 (287-337)||(18899-18949)
[»] scaffold0023 (1 HSPs)
scaffold0023 (22-63)||(147038-147079)
[»] scaffold0888 (1 HSPs)
scaffold0888 (270-337)||(4249-4317)
[»] scaffold0071 (1 HSPs)
scaffold0071 (287-337)||(44280-44330)


Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-116; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 17 - 337
Target Start/End: Original strand, 16083145 - 16083465
Alignment:
Q  17 gagatgaggtgcaggcatggcggcgacgaaacaacttcttatcggcggcgaggttgctgccacgcttccgaattgattttcatccaattgcgtcgtgatc 116  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||  |||||||||||    
T  16083145 gagatgaggtgcaggtatggtggcgacgaaacaacttcttatcgtcggcgaggttgttgccttgcttccgaattgattttcatccaacggcgtcgtgatc 16083244  T
Q  117 ggaggattcggtcatcgtgacatttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttagatttttgatgttgaaagattatccggatcg 216  Q
    |||| ||||||||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||| |||| |||||||    
T  16083245 ggagtattcggtcatcgtggtggttgggaatgatgaagttaggttcctaaatccaagaggtgtgatttagggttttgatgtggaaaggttattcggatcg 16083344  T
Q  217 cagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttagttttatcttttcccac 316  Q
    ||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16083345 cagtttagtggttacgattaagatttctatggctttagggtttctaaattgcggattacgattcaaaagagtggtctaggttagttttaccttttcccac 16083444  T
Q  317 agacggcgctaactgtacttg 337  Q
    ||||||||| |||| ||||||    
T  16083445 agacggcgccaactatacttg 16083465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 88 - 337
Target Start/End: Original strand, 16084623 - 16084872
Alignment:
Q  88 attgattttcatccaattgcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttaga 187  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||     
T  16084623 attgattttcatccaacggcgtcgtgatcggagtattcggtcatcgtggtggttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttagg 16084722  T
Q  188 tttttgatgttgaaagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagag 287  Q
     ||||||||| ||||| |||| |||||||||||||||||  |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  16084723 gttttgatgtggaaaggttattcggatcgcagtttagtggttacgattaagatttctatggctttagggtttctaaattgcggattacgattcaaaagag 16084822  T
Q  288 tggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  16084823 tggtctaggttagttttaccttttcccacagacggcgccaactatacttg 16084872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 88 - 337
Target Start/End: Original strand, 16086030 - 16086279
Alignment:
Q  88 attgattttcatccaattgcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttaga 187  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||     
T  16086030 attgattttcatccaacggcgtcgtgatcggagtattcggtcatcgtggtggttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttagg 16086129  T
Q  188 tttttgatgttgaaagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagag 287  Q
     ||||||||| ||||| |||| |||||||||||||||||  |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  16086130 gttttgatgtggaaaggttattcggatcgcagtttagtggttacgattaagatttctatggctttagggtttctaaattgcggattacgattcaaaagag 16086229  T
Q  288 tggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  16086230 tggtctaggttagttttaccttttcccacagacggcgccaactatacttg 16086279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 88 - 337
Target Start/End: Original strand, 16087437 - 16087686
Alignment:
Q  88 attgattttcatccaattgcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttaga 187  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||     
T  16087437 attgattttcatccaacggcgtcgtgatcggagtattcggtcatcgtggtggttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttagg 16087536  T
Q  188 tttttgatgttgaaagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagag 287  Q
     ||||||||| ||||| |||| |||||||||||||||||  |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  16087537 gttttgatgtggaaaggttattcggatcgcagtttagtggttacgattaagatttctatggctttagggtttctaaattgcggattacgattcaaaagag 16087636  T
Q  288 tggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  16087637 tggtctaggttagttttaccttttcccacagacggcgccaactatacttg 16087686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 201 - 355
Target Start/End: Original strand, 26908355 - 26908508
Alignment:
Q  201 aagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttag 300  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26908355 aagatcatccggatcgcagtttagtgactacgattaagtttcctatggctttagaatttctaaatcgcggattacgattcaaaagagtggtctaggttag 26908454  T
Q  301 ttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    ||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  26908455 ttttacctcttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 26908508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 26908255 - 26908357
Alignment:
Q  52 ttcttatcggcggcgaggttgctgccacgcttccgaattgattttcatccaattgcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatg 151  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||    
T  26908255 ttctcatcggcggcgaggttgctgccatgcttccgaattgattttcatccaattgcatcgtgatcggaggattcggtcatcgtggcggttgggaatgatg 26908354  T
Q  152 aag 154  Q
    |||    
T  26908355 aag 26908357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 401
Target Start/End: Complemental strand, 36598539 - 36598460
Alignment:
Q  321 ggcgctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattat 401  Q
    ||||| |||||||||||| |||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  36598539 ggcgccaactgtacttgtcgaaaaa-gtacggtaaagagaactagggttttctccgtatactagggttttagactgattat 36598460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 36602728 - 36602652
Alignment:
Q  324 gctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattat 401  Q
    |||| |||||||||| |||||| ||||||||||||||| | | |||||||| ||||||||||||||||||||||||||    
T  36602728 gctacctgtacttgtcgaaaaa-gtacggtaaagagaactggggttttctccgtatactagggttttagactgattat 36602652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 14366364 - 14366314
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  14366364 gtggtctaggttagttttaccttttcccacagacggcgccaactgtacttg 14366314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 2269 - 2319
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  2269 gtggtcgaggttagttttaccttttcccacagacggcgccaactgtacttg 2319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 14673594 - 14673544
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  14673594 gtggtcgaggttagttttacctcttcccacagacggcgccaactgtacttg 14673544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 17008017 - 17007967
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | ||||||||||||||| | |||||||||||    
T  17008017 gtggtctaggttagttttaccgtttcccacagacggccccaactgtacttg 17007967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 17540933 - 17540983
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | ||||||||||||||| | |||||||||||    
T  17540933 gtggtctaggttagttttaccgtttcccacagacggccccaactgtacttg 17540983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 21408591 - 21408541
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  21408591 gtggtcaaggttagttttacctcttcccacagacggcgccaactgtacttg 21408541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 21803083 - 21803033
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  21803083 gtggtcaaggttagttttacctcttcccacagacggcgccaactgtacttg 21803033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 18973420 - 18973353
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||| ||| |||||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  18973420 gtggtcgaggctagttttacctcttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 18973353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 25502808 - 25502741
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||| |||||||||||| || | |||||||||||||| |||||||||||  | ||||||||||||||    
T  25502808 gtggtcaaggttagttttacctctccccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 25502741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 31709127 - 31709085
Alignment:
Q  295 ggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||| |||| |||||||||||||| |||||||||||    
T  31709127 ggttagttttacctttccccacagacggcgccaactgtacttg 31709085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 3533 - 3845
Alignment:
Q  17 gagatgaggtgcaggcatggcggcgacgaaacaacttcttatcggcggcgaggttgctgccacgcttccgaattgattttcatccaattgcgtcgtgatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||     
T  3533 gagattaggtgcaggcatggcggcgacgaaacaacttcttatcggtggcgaggttgctgccatgcttccgaattgattttcatccaagggcgtcgtgatt 3632  T
Q  117 ggaggattcggtcatcgtgacatttgggaatgatgaagttaggttcctaaatccgagaggtgtgatttag------------atttttgatgttgaaaga 204  Q
    ||||||||||||||||||| || |||||||||||||||| |||||| ||||||||||| |||||||||||             ||||| |||| |||||     
T  3633 ggaggattcggtcatcgtggcagttgggaatgatgaagtcaggttcttaaatccgagaagtgtgatttagtttttttttttttttttttatgtggaaagg 3732  T
Q  205 ttatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttagtttt 304  Q
    |||||  |||||||||||||||||||||||||||||||||| |  |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3733 ttatcacgatcgcagtttagtgactacgattaagttttctacgagtttagggtttctaaatcgcggattacgattcaaaagagtggtctaggttagtttt 3832  T
Q  305 atcttttcccaca 317  Q
    | || ||||||||    
T  3833 acctcttcccaca 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 201 - 337
Target Start/End: Complemental strand, 23693049 - 23692914
Alignment:
Q  201 aagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  23693049 aagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaa-tcgcggattacgattcaaaagagtggtctaggttag 23692951  T
Q  301 ttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  23692950 ttttaccttttcccacagacggcgccaactgtacttg 23692914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 3071787 - 3071723
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  3071787 aaaaagtacggtaaagagaattagggttttctcagtatattagggttttagactgattattggat 3071723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 358
Target Start/End: Complemental strand, 8998278 - 8998208
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||  | |||||||||||||||||    
T  8998278 gtggtcgaggttagttttacctcttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaaaga 8998208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 8164880 - 8164820
Alignment:
Q  294 aggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  8164880 aggttagttttaccttttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 8164820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 23693095 - 23693047
Alignment:
Q  106 gcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatgaag 154  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||    
T  23693095 gcgtcgtgatcggaggattcggtcatcgtggcgattgggaatgatgaag 23693047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 29603679 - 29603729
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| ||| |||||||| ||||||||||||||||||| || ||||||||    
T  29603679 gtggtcaaggctagttttaccttttcccacagacggcgccaattgtacttg 29603729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 201 - 337
Target Start/End: Original strand, 24280757 - 24280893
Alignment:
Q  201 aagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttag 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  24280757 aagattatcaggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaatcgcggattatgattcaaaagagtggtctaggttag 24280856  T
Q  301 ttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  24280857 ttttaccttttcccacagacggcgccaactgtacttg 24280893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 201 - 337
Target Start/End: Complemental strand, 20442826 - 20442689
Alignment:
Q  201 aagattatccggatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattc-aaaagagtggtctaggtta 299  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  20442826 aagattatccgtatcgcagtttagtgactacgattaagttttctatggctttagaatttctaaatcgcggattacgattcaaaaagagtggtctaggtta 20442727  T
Q  300 gttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| ||||||||||| ||||||| |||||||||||    
T  20442726 gttttaccttttcccacaaacggcgccaactgtacttg 20442689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 555320 - 555390
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||  | |||||||||||||||||    
T  555320 gtggtcaaggttagttttaccttttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaaaga 555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 337
Target Start/End: Complemental strand, 33295849 - 33295756
Alignment:
Q  244 tatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||| |||||  |||| ||||||||  || ||||||| ||  ||| ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  33295849 tatggttttagggtttccaaattgcgatttgcgattcagaaaggtgatctaggttagttttaccttttcccacagacggcgccaactgtacttg 33295756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 19913710 - 19913780
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    ||||||||||||||||||| | || ||||||| |||||| |||||||||||  | |||||||||||||||||    
T  19913710 gtggtctaggttagttttaccgttccccacagtcggcgccaactgtacttgcag-aaaaagtacggtaaaga 19913780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 15157978 - 15158028
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  15157978 gtggtcgaggttagttttacctcttcccacagacggcgccaactgtacttg 15158028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 24280711 - 24280759
Alignment:
Q  106 gcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatgaag 154  Q
    |||||||||||||||||||||||||||||| |  || ||||||||||||    
T  24280711 gcgtcgtgatcggaggattcggtcatcgtggcgattaggaatgatgaag 24280759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 20195079 - 20195029
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| ||||| ||| ||||||||| |||| ||||||    
T  20195079 gtggtctaggttagttttaactttttccatagacggcgccaactatacttg 20195029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 20442872 - 20442824
Alignment:
Q  106 gcgtcgtgatcggaggattcggtcatcgtgacatttgggaatgatgaag 154  Q
    ||||||||||||||||||||||||||| || |  || ||||||||||||    
T  20442872 gcgtcgtgatcggaggattcggtcatcttggcgattaggaatgatgaag 20442824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 22 - 337
Target Start/End: Complemental strand, 18557141 - 18556827
Alignment:
Q  22 gaggtgcaggcatggcggcgacgaaacaacttcttatcggcggcgaggttgctgccacgcttccgaattgattttcatccaattgcgtcgtgatcggagg 121  Q
    |||||||| |||||||||||||| || |||||||||||||||   |||||||||||| ||||| ||||||||||||||| ||   ||   |||| |||||    
T  18557141 gaggtgcaagcatggcggcgacggaataacttcttatcggcg---aggttgctgccatgcttctgaattgattttcatcaaacgacgatttgatgggagg 18557045  T
Q  122 attcggtcatcgtgacatttgggaatgatgaagttaggttcctaaatcc-gagaggtgtgatttagatttttgatgttgaaagattatccggatcgcagt 220  Q
    | |||||||||||| |  |||||  |||||||||||||||||||||||  | ||| |   ||||||  ||||| ||| ||||| ||||| |||| | |||    
T  18557044 actcggtcatcgtggcggttgggggtgatgaagttaggttcctaaatcatgggagctaccatttaggcttttggtgtggaaaggttatctggattgtagt 18556945  T
Q  221 ttagtgactacgattaagttttctatggctttagaatttctaaattgcggattacgattcaaaagagtggtctaggttagttttatc-ttttcccacaga 319  Q
    ||| ||||||||||| || ||||||||||||||| |||||||||| || |||||||||||| |  |||||||||||||||||||| |  ||| |||||||    
T  18556944 ttaatgactacgattcagatttctatggctttaggatttctaaatcgcagattacgattcagagaagtggtctaggttagttttaccgattttccacaga 18556845  T
Q  320 cggcgctaactgtacttg 337  Q
    |||||| |||||||||||    
T  18556844 cggcgccaactgtacttg 18556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 310 - 406
Target Start/End: Original strand, 10815828 - 10815923
Alignment:
Q  310 ttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  10815828 ttcccacagacggcgccaactgtacttgtcgaaaa-agtacggtaaagagaattagggttttctcagtatactagggttttagattgattattggat 10815923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 406
Target Start/End: Original strand, 10812946 - 10813022
Alignment:
Q  329 ctgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  10812946 ctgtacttgtcgaaaaa-gtacgataaagagaattagggttttctcagtatactagggttttagattgattattggat 10813022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 38700349 - 38700290
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattat 401  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  38700349 aaaaagtacggtaaagagaattagggttttcttcgtatactagggttttagactgattat 38700290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 2689268 - 2689171
Alignment:
Q  257 tttctaaattgcggattacgattcaaaagagtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    ||||||||| |  ||||||||||||||| |||||| ||||  ||||||| | ||||||||||||||||| |||||||||||| | ||||||||||||||    
T  2689268 tttctaaatcgacgattacgattcaaaaaagtggtttaggaaagttttaccgtttcccacagacggcgccaactgtacttgtag-aaaaagtacggtaa 2689171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 8856861 - 8856911
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8856861 gtggtctaggttagttttaccttttcccacagacggcgccaactgtacttg 8856911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 26907105 - 26907155
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  26907105 gtggtctaggttagttttaccttttcccacagacggcgccaactgtacttg 26907155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 17593910 - 17593862
Alignment:
Q  289 ggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  17593910 ggtctaggttagttttaccttttcccacagacggcgccaactgtacttg 17593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 19808283 - 19808353
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| ||| |||||||| || |||||||||||||||| |||||||||||  | |||||||||||||||||    
T  19808283 gtggtcgaggctagttttacctcttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaaaga 19808353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 20012381 - 20012451
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| |||||||||||| || |||||||||||||||| ||||||||| |  | |||||||||||||||||    
T  20012381 gtggtcgaggttagttttacctcttcccacagacggcgccaactgtactggcag-aaaaagtacggtaaaga 20012451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 10776770 - 10776820
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | ||||||||||||||||| | |||||||||    
T  10776770 gtggtctaggttagttttaccgtttcccacagacggcgccatctgtacttg 10776820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 12209009 - 12209059
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| ||||||||||||||||||| |||| ||||||    
T  12209009 gtggtcaaggttagttttaccttttcccacagacggcgccaactatacttg 12209059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 14430048 - 14429998
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  14430048 gtggtcaaggttagttttacctcttcccacagacggcgccaactgtacttg 14429998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 103304 - 103354
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||| ||||||||||| |||||||||||    
T  103304 gtggtcaaggttagttttacctcttcctacagacggcgccaactgtacttg 103354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 15417958 - 15417908
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| |||| ||||||| |||||| |||||||||||    
T  15417958 gtggtcaaggttagttttacctttccccacagtcggcgccaactgtacttg 15417908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 20438 - 20552
Alignment:
Q  287 gtggtctaggttagtttta-tcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagg 385  Q
    ||||||||||||||||||| | ||  ||||| |  ||||| |||||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||| |    
T  20438 gtggtctaggttagttttactgttgccccacggtgggcgccaactgtacttgtcgaaaa-agtacggtaaagagaactagggttttctcagtatactaag 20536  T
Q  386 gttttagactgattat 401  Q
    ||||||||||||||||    
T  20537 gttttagactgattat 20552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 405
Target Start/End: Complemental strand, 30306 - 30243
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcgga 405  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  30306 aaaaagtacggtaaagagaattagggttttctcagtatactagggttttagactgatcatcgga 30243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 405
Target Start/End: Complemental strand, 35613 - 35550
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcgga 405  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  35613 aaaaagtacggtaaagagaattagggttttctcagtatactagggttttagactgatcatcgga 35550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 25970305 - 25970239
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggatgc 408  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  25970305 aaaaagtacggtaaagaaaattagggttttctcagtatactagggttttagactgattattggatgc 25970239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 25974745 - 25974679
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggatgc 408  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  25974745 aaaaagtacggtaaagaaaattagggttttctcagtatactagggttttagactgattattggatgc 25974679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 13728572 - 13728636
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  13728572 aaaaagtacggtaaagagaattagggttttctcagtatattagggttttagactgattattggat 13728636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 17996800 - 17996864
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  17996800 aaaaagtacggtaaagagaattagggttttctcagtatactagggtttcagactgattattggat 17996864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 18929353 - 18929424
Alignment:
Q  329 ctgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattat 401  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  18929353 ctgtacttgtcgaaaa-agtacggtaaagagaattagaattttctcagtatactagggttttagattgattat 18929424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 13727218 - 13727282
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||| ||||    
T  13727218 aaaaagtacggtaaagagaattagggttttctttgtatattagggttttagactgattattggat 13727282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 401
Target Start/End: Original strand, 19008445 - 19008524
Alignment:
Q  321 ggcgctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattat 401  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  19008445 ggcgccaactgtacttgtc-aaaaaagtatggtaaagagaattaggattttctcagtatactggggttttagattgattat 19008524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 4282691 - 4282758
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||| |||||||||||| | ||||||||||||||||| |||||||||||  | ||||||||||||||    
T  4282691 gtggtcaaggttagttttaccgtttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 4282758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 22622496 - 22622566
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| |||||||||||| || | |||||||||||||| |||||||||||  | |||||||||||||||||    
T  22622496 gtggtcgaggttagttttacctctccccacagacggcgccaactgtacttgcag-aaaaagtacggtaaaga 22622566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 11231539 - 11231489
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||    
T  11231539 gtggtctaggttaattttaccttttcccacagacgacgccaactgtacttg 11231489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 19577181 - 19577231
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | || |||||||||||||| |||||||||||    
T  19577181 gtggtctaggttagttttaccattacccacagacggcgccaactgtacttg 19577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 34336038 - 34336098
Alignment:
Q  294 aggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||||||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  34336038 aggttagttttacctcttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 34336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 11694969 - 11694902
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||| ||| |||||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  11694969 gtggtcaaggctagttttacctcttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 11694902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 11100325 - 11100261
Alignment:
Q  342 aaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  11100325 aaaaagtacggtaaagagaattagggttttctcagtatactagggtttcagactgattattggat 11100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 550577 - 550676
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactaggg 386  Q
    |||||| ||||||||||||  | |||||||||||||||| |  ||||||||| ||||| |||||||||||||||||||| |||||||| ||||  |||||    
T  550577 gtggtcaaggttagttttacgtcttcccacagacggcgcca--tgtacttgttgaaaa-agtacggtaaagagaattagggttttctctgtattttaggg 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 15834890 - 15834960
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||  | |||||||||||||||||    
T  15834890 gtggtcgaggttagttttaccttttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaaaga 15834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 362047 - 362114
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||  | ||||||||||||||    
T  362047 gtggtctaggttagttttaccgtttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 362114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 12538378 - 12538445
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||| ||| |||||||| ||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  12538378 gtggtcaaggctagttttaccttttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 12538445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 11527557 - 11527507
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| ||||||||||||||||||| || ||||||||    
T  11527557 gtggtcaaggttagttttaccttttcccacagacggcgccaattgtacttg 11527507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 15932185 - 15932235
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  15932185 gtggtcaaggttagttttacctcttcccacagacggcgccaactgtacttg 15932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 23532411 - 23532461
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| ||||||||||||||||| | |||||||||||    
T  23532411 gtggtcaaggttagttttaccttttcccacagacggcaccaactgtacttg 23532461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 5332454 - 5332524
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    |||||| |||||||||||| || |||||||||||||||  ||||||||| |  | |||||||||||||||||    
T  5332454 gtggtcgaggttagttttacctcttcccacagacggcgtcaactgtactagccg-aaaaagtacggtaaaga 5332524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 9066590 - 9066540
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | |||||||| ||| |||| |||||||||||    
T  9066590 gtggtctaggttagttttaccgtttcccacggactgcgccaactgtacttg 9066540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 37282829 - 37282874
Alignment:
Q  310 ttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||||||||||||| |||||||||||   |||||||||||||||    
T  37282829 ttcccacagacggcgccaactgtacttgcaaaaaaaagtacggtaa 37282874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 783719 - 783763
Alignment:
Q  293 taggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||| | ||| ||||||||||||| |||||||||||    
T  783719 taggttagttttaccgttttccacagacggcgccaactgtacttg 783763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 8686 - 8763
Alignment:
Q  328 actgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattatcggat 406  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||  | ||||||||||||    
T  8686 actgtacttgtcgaaaa-agtacggtaaagagaattaggattttctcagtatactagggtttttcattgattatcggat 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 1527 - 1451
Alignment:
Q  324 gctaactgtacttgtggaaaaaagtacggtaaagagaattagtgttttctcagtatactagggttttagactgattat 401  Q
    |||| |||||||||| |||||| ||||||||||||||| | | |||||||| ||||||||||||||||||||||||||    
T  1527 gctacctgtacttgtcgaaaaa-gtacggtaaagagaactggggttttctccgtatactagggttttagactgattat 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 40572204 - 40572274
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaaaga 358  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||  | |||||||||||||||||    
T  40572204 gtggtctaggttagttttaccgtttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaaaga 40572274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 20679842 - 20679892
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  20679842 gtggtcaaggttagttttacctcttcccacagacggcgccaactgtacttg 20679892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 20817792 - 20817727
Alignment:
Q  272 ttacgattcaaaagagtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||||||| ||  |||||| |||||| |||||  |||||||||||||||||| |||||||||||    
T  20817792 ttacgattcagaaacgtggtcaaggttacttttacattttcccacagacggcgccaactgtacttg 20817727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 408
Target Start/End: Original strand, 20680149 - 20680181
Alignment:
Q  376 gtatactagggttttagactgattatcggatgc 408  Q
    |||||||||||||||||||||||||| ||||||    
T  20680149 gtatactagggttttagactgattattggatgc 20680181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 722964 - 722897
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttgtggaaaaaagtacggtaa 355  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  722964 gtggtcaaggttagttttaccttttcccacagacggcgccaactgtacttgcag-aaaaagtacggtaa 722897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 10755196 - 10755146
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  10755196 gtggtctaggttagttttaccgtttcccacagacggcgccaactgtacttg 10755146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 10968965 - 10968915
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  10968965 gtggtctaggttagttttaccgtttcccacagacggcgccaactgtacttg 10968915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 22751948 - 22751900
Alignment:
Q  289 ggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||| |||||||||||| |||||||||||||| |||| |||||||||||    
T  22751948 ggtcaaggttagttttaccttttcccacagacagcgccaactgtacttg 22751900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 20494807 - 20494757
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||| ||||||||||| |||||||||||    
T  20494807 gtggtcaaggttagttttacctcttcctacagacggcgccaactgtacttg 20494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 23878942 - 23878892
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| | |||||||||||||| || ||| |||||||    
T  23878942 gtggtctaggttagttttaccgtttcccacagacggtgccaacggtacttg 23878892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 443
Target Start/End: Original strand, 45400795 - 45400829
Alignment:
Q  409 tgcatggatcacattgttatctagacttcatctca 443  Q
    ||||||||||||||||||||| |||||||||||||    
T  45400795 tgcatggatcacattgttatcaagacttcatctca 45400829  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 408
Target Start/End: Original strand, 28924698 - 28924730
Alignment:
Q  376 gtatactagggttttagactgattatcggatgc 408  Q
    |||||||||||||||||||||||||| ||||||    
T  28924698 gtatactagggttttagactgattattggatgc 28924730  T

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Target: scaffold0264 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 12905 - 12956
Alignment:
Q  286 agtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  12905 agtggtcaaggttagttttaccttttcccacagacggcgccaactgtacttg 12956  T

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Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 135685 - 135735
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  135685 gtggtcgaggttagttttaccttttcccacagacggcgccaactgtacttg 135735  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 78903 - 78859
Alignment:
Q  293 taggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  78903 taggttagttttaccttttcccacagacggcgccaactgtacttg 78859  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 194827 - 194779
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtact 335  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  194827 gtggtctaggctagttttaccttttcccacagacggcgccaactgtact 194779  T

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Target: scaffold1778 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 869 - 919
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  869 gtggtcaaggttagttttacctcttcccacagacggcgccaactgtacttg 919  T

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Target: scaffold0130 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 18899 - 18949
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||||||| || |||||| ||||||||| |||||||||||    
T  18899 gtggtctaggttagttttacctcttcccatagacggcgccaactgtacttg 18949  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 147079 - 147038
Alignment:
Q  22 gaggtgcaggcatggcggcgacgaaacaacttcttatcggcg 63  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  147079 gaggtgcaggcatggcggcgacggaataacttcttatcggcg 147038  T

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Target: scaffold0888 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 4317 - 4249
Alignment:
Q  270 gattacgattcaaaaga-gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    ||||||||||||||  | |||||| || ||||||||| |||| |||||||||||||| |||||||||||    
T  4317 gattacgattcaaacaacgtggtcaagattagttttacctttccccacagacggcgccaactgtacttg 4249  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 44280 - 44330
Alignment:
Q  287 gtggtctaggttagttttatcttttcccacagacggcgctaactgtacttg 337  Q
    |||||| |||||||||||| |||| ||||||| |||||| |||||||||||    
T  44280 gtggtcaaggttagttttacctttccccacagtcggcgccaactgtacttg 44330  T

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