View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10580_low_25 (Length: 250)

Name: NF10580_low_25
Description: NF10580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10580_low_25
NF10580_low_25
[»] chr8 (57 HSPs)
chr8 (41-187)||(5033158-5033306)
chr8 (41-187)||(35440962-35441110)
chr8 (41-187)||(33841584-33841732)
chr8 (33-183)||(5667086-5667238)
chr8 (41-176)||(10086754-10086891)
chr8 (41-153)||(8243415-8243529)
chr8 (40-188)||(8796418-8796568)
chr8 (37-187)||(4958593-4958743)
chr8 (41-184)||(45191123-45191268)
chr8 (31-183)||(5033158-5033312)
chr8 (72-188)||(39850983-39851101)
chr8 (41-114)||(2581822-2581895)
chr8 (32-177)||(6296602-6296740)
chr8 (37-153)||(34229634-34229752)
chr8 (37-176)||(43844475-43844614)
chr8 (33-183)||(33841580-33841732)
chr8 (33-183)||(35440958-35441110)
chr8 (119-187)||(5667090-5667158)
chr8 (41-107)||(22649842-22649908)
chr8 (118-188)||(43844545-43844615)
chr8 (89-153)||(34541830-34541896)
chr8 (118-188)||(34229633-34229703)
chr8 (118-183)||(45191203-45191268)
chr8 (195-234)||(5046884-5046923)
chr8 (118-184)||(8796418-8796484)
chr8 (48-106)||(10086833-10086891)
chr8 (189-243)||(33347434-33347488)
chr8 (118-183)||(2581822-2581887)
chr8 (41-106)||(5667173-5667238)
chr8 (118-183)||(8243464-8243529)
chr8 (118-183)||(22649842-22649907)
chr8 (34-103)||(45191117-45191186)
chr8 (34-106)||(8243387-8243450)
chr8 (109-153)||(35031641-35031685)
chr8 (189-244)||(23230764-23230819)
chr8 (34-153)||(1880229-1880349)
chr8 (129-187)||(1880232-1880289)
chr8 (190-244)||(7883155-7883209)
chr8 (118-183)||(10086754-10086819)
chr8 (190-243)||(24186575-24186628)
chr8 (33-70)||(34541801-34541838)
chr8 (109-153)||(31159918-31159962)
chr8 (195-243)||(41684504-41684552)
chr8 (118-153)||(6296632-6296667)
chr8 (32-91)||(39851046-39851105)
chr8 (118-188)||(4958592-4958661)
chr8 (190-236)||(16928671-16928717)
chr8 (190-244)||(20553155-20553209)
chr8 (198-244)||(27110387-27110433)
chr8 (190-244)||(31013522-31013576)
chr8 (189-243)||(41060176-41060230)
chr8 (189-227)||(45445724-45445762)
chr8 (37-106)||(8796498-8796567)
chr8 (198-235)||(29939430-29939467)
chr8 (189-245)||(18890612-18890668)
chr8 (189-236)||(28086725-28086773)
chr8 (109-153)||(37618754-37618798)
[»] chr7 (48 HSPs)
chr7 (41-187)||(11016866-11017014)
chr7 (41-187)||(4290542-4290690)
chr7 (41-177)||(38975802-38975940)
chr7 (41-153)||(34854722-34854836)
chr7 (41-153)||(41018255-41018369)
chr7 (41-161)||(15027539-15027661)
chr7 (43-187)||(42628303-42628440)
chr7 (78-184)||(48000771-48000879)
chr7 (32-183)||(11016866-11017019)
chr7 (41-153)||(45231881-45231991)
chr7 (41-153)||(29053341-29053446)
chr7 (32-106)||(4290621-4290695)
chr7 (72-153)||(7671938-7672021)
chr7 (34-106)||(42628371-42628443)
chr7 (46-142)||(27028831-27028929)
chr7 (33-184)||(41945844-41945997)
chr7 (109-183)||(48000691-48000765)
chr7 (35-111)||(27028719-27028795)
chr7 (32-100)||(48000819-48000887)
chr7 (121-183)||(41018307-41018369)
chr7 (43-153)||(4649328-4649433)
chr7 (41-106)||(48000691-48000756)
chr7 (121-183)||(45231929-45231991)
chr7 (118-187)||(27028721-27028790)
chr7 (118-183)||(34854771-34854836)
chr7 (118-183)||(38975802-38975867)
chr7 (195-235)||(5348513-5348553)
chr7 (196-244)||(19404679-19404727)
chr7 (62-127)||(22764753-22764820)
chr7 (34-106)||(38975881-38975953)
chr7 (190-244)||(12141224-12141278)
chr7 (47-130)||(30217504-30217588)
chr7 (190-244)||(39171506-39171560)
chr7 (32-70)||(41018225-41018263)
chr7 (118-183)||(15027539-15027604)
chr7 (195-244)||(39229135-39229184)
chr7 (34-71)||(45231853-45231890)
chr7 (189-245)||(40993277-40993333)
chr7 (35-106)||(34854695-34854757)
chr7 (190-233)||(38798913-38798956)
chr7 (190-244)||(9450053-9450107)
chr7 (107-153)||(41084207-41084253)
chr7 (40-106)||(41945931-41945997)
chr7 (190-244)||(46700156-46700210)
chr7 (122-183)||(4290542-4290603)
chr7 (198-243)||(25287110-25287155)
chr7 (37-70)||(27028795-27028828)
chr7 (72-153)||(10419486-10419569)
[»] chr1 (80 HSPs)
chr1 (41-187)||(48993910-48994058)
chr1 (41-187)||(29179590-29179738)
chr1 (41-184)||(5995366-5995511)
chr1 (40-183)||(17127561-17127706)
chr1 (41-187)||(49444906-49445043)
chr1 (35-173)||(32540755-32540895)
chr1 (41-153)||(37155043-37155157)
chr1 (72-188)||(29371396-29371514)
chr1 (43-153)||(44706810-44706923)
chr1 (40-188)||(9157306-9157447)
chr1 (41-153)||(48498412-48498526)
chr1 (82-185)||(33219611-33219716)
chr1 (40-142)||(1091582-1091686)
chr1 (34-183)||(48993907-48994058)
chr1 (41-184)||(46931994-46932123)
chr1 (37-187)||(15220813-15220956)
chr1 (43-153)||(34062217-34062320)
chr1 (37-153)||(4608989-4609107)
chr1 (78-153)||(38674532-38674607)
chr1 (32-183)||(29179585-29179738)
chr1 (41-152)||(46333974-46334078)
chr1 (41-153)||(8337878-8337983)
chr1 (32-106)||(5995445-5995519)
chr1 (118-184)||(9157306-9157372)
chr1 (32-131)||(36290456-36290557)
chr1 (40-153)||(19711207-19711320)
chr1 (34-115)||(28395627-28395708)
chr1 (118-187)||(32540824-32540893)
chr1 (84-153)||(741529-741600)
chr1 (40-115)||(21630038-21630113)
chr1 (51-151)||(45728294-45728396)
chr1 (118-184)||(21630038-21630104)
chr1 (34-106)||(15220887-15220959)
chr1 (118-187)||(28395630-28395699)
chr1 (118-183)||(37155043-37155108)
chr1 (34-183)||(46931994-46932129)
chr1 (34-106)||(49444903-49444975)
chr1 (125-188)||(36290490-36290553)
chr1 (118-184)||(1091620-1091686)
chr1 (98-153)||(1819516-1819573)
chr1 (118-188)||(4608988-4609058)
chr1 (118-184)||(17127640-17127706)
chr1 (118-183)||(5995366-5995431)
chr1 (40-92)||(31342259-31342311)
chr1 (51-106)||(32540755-32540810)
chr1 (118-177)||(44706860-44706919)
chr1 (81-153)||(47303432-47303506)
chr1 (190-244)||(45415680-45415734)
chr1 (37-106)||(29371444-29371513)
chr1 (109-153)||(28928806-28928850)
chr1 (72-153)||(48604974-48605057)
chr1 (34-70)||(48823884-48823920)
chr1 (102-153)||(2573182-2573233)
chr1 (39-106)||(33219649-33219716)
chr1 (118-173)||(45728294-45728349)
chr1 (118-152)||(46334022-46334056)
chr1 (190-235)||(13144728-13144773)
chr1 (41-106)||(17127561-17127626)
chr1 (195-244)||(31317858-31317907)
chr1 (33-70)||(44183438-44183475)
chr1 (33-106)||(46333944-46334008)
chr1 (118-183)||(48498412-48498477)
chr1 (189-244)||(5983958-5984013)
chr1 (197-244)||(8211834-8211881)
chr1 (190-233)||(16989504-16989547)
chr1 (35-70)||(28928779-28928814)
chr1 (190-244)||(14872761-14872815)
chr1 (34-68)||(26514245-26514279)
chr1 (31-72)||(1819485-1819526)
chr1 (34-71)||(34062311-34062348)
chr1 (190-231)||(34878194-34878235)
chr1 (34-71)||(48498517-48498553)
chr1 (120-153)||(48823912-48823945)
chr1 (189-234)||(51373773-51373818)
chr1 (190-234)||(4413246-4413290)
chr1 (198-234)||(15431590-15431626)
chr1 (128-184)||(31342259-31342315)
chr1 (32-92)||(36381580-36381640)
chr1 (128-176)||(36381596-36381644)
chr1 (97-133)||(47303640-47303676)
[»] chr4 (72 HSPs)
chr4 (41-187)||(51265442-51265590)
chr4 (43-187)||(23444262-23444408)
chr4 (41-187)||(6271699-6271847)
chr4 (58-187)||(47661856-47661987)
chr4 (36-153)||(26186043-26186160)
chr4 (34-183)||(35682156-35682307)
chr4 (41-187)||(42375016-42375155)
chr4 (72-187)||(53954638-53954755)
chr4 (33-177)||(44379919-44380065)
chr4 (41-131)||(30861823-30861915)
chr4 (40-109)||(3862619-3862688)
chr4 (40-109)||(3871376-3871445)
chr4 (41-153)||(47404612-47404717)
chr4 (31-153)||(52028545-52028660)
chr4 (34-106)||(6271778-6271850)
chr4 (72-153)||(40789207-40789290)
chr4 (34-106)||(42375086-42375158)
chr4 (34-106)||(47661918-47661990)
chr4 (34-183)||(51265442-51265593)
chr4 (33-177)||(23444258-23444404)
chr4 (43-168)||(47762607-47762734)
chr4 (72-153)||(55090023-55090106)
chr4 (94-153)||(50384132-50384193)
chr4 (118-183)||(30861850-30861915)
chr4 (41-153)||(31430488-31430590)
chr4 (34-106)||(53954686-53954758)
chr4 (118-177)||(3862622-3862681)
chr4 (118-177)||(3871379-3871438)
chr4 (34-92)||(30709990-30710048)
chr4 (118-183)||(6271699-6271764)
chr4 (118-187)||(26186090-26186159)
chr4 (195-244)||(33921193-33921242)
chr4 (40-98)||(5048884-5048942)
chr4 (33-71)||(31430459-31430497)
chr4 (32-70)||(47404582-47404620)
chr4 (128-185)||(30709986-30710043)
chr4 (118-187)||(35682159-35682228)
chr4 (33-70)||(50384103-50384140)
chr4 (109-153)||(24006097-24006141)
chr4 (189-245)||(56040561-56040617)
chr4 (94-166)||(25818387-25818461)
chr4 (109-152)||(28693951-28693994)
chr4 (47-106)||(35682242-35682301)
chr4 (190-244)||(21662576-21662630)
chr4 (190-244)||(21671340-21671394)
chr4 (37-71)||(24006164-24006198)
chr4 (190-236)||(24098983-24099029)
chr4 (198-236)||(37030408-37030446)
chr4 (189-235)||(45418660-45418706)
chr4 (124-177)||(47762611-47762664)
chr4 (40-92)||(2325070-2325122)
chr4 (34-70)||(24006069-24006105)
chr4 (40-76)||(25617977-25618013)
chr4 (58-106)||(25818387-25818435)
chr4 (25-65)||(34176246-34176286)
chr4 (118-166)||(47661856-47661904)
chr4 (189-245)||(52060838-52060894)
chr4 (189-244)||(29120294-29120349)
chr4 (189-244)||(43510335-43510390)
chr4 (120-187)||(44379923-44379990)
chr4 (94-142)||(45591448-45591498)
chr4 (190-244)||(2520918-2520972)
chr4 (119-153)||(17285807-17285841)
chr4 (32-70)||(40789282-40789320)
chr4 (131-184)||(2325069-2325122)
chr4 (190-243)||(10496475-10496528)
chr4 (37-90)||(19184496-19184549)
chr4 (78-176)||(38714857-38714957)
chr4 (43-92)||(44380020-44380069)
chr4 (198-243)||(52978884-52978929)
chr4 (197-225)||(12199616-12199644)
chr4 (198-234)||(54022009-54022045)
[»] chr2 (61 HSPs)
chr2 (41-187)||(16514421-16514569)
chr2 (41-177)||(29508693-29508832)
chr2 (41-187)||(38933593-38933732)
chr2 (41-182)||(6217222-6217356)
chr2 (80-188)||(14470584-14470694)
chr2 (58-187)||(6721965-6722096)
chr2 (34-177)||(14229356-14229491)
chr2 (58-153)||(15011294-15011391)
chr2 (37-184)||(24115913-24116062)
chr2 (41-184)||(37961712-37961848)
chr2 (42-106)||(6217222-6217286)
chr2 (33-153)||(2828582-2828695)
chr2 (32-106)||(38933663-38933737)
chr2 (72-170)||(29925580-29925680)
chr2 (34-106)||(16514500-16514572)
chr2 (46-113)||(9173050-9173117)
chr2 (109-187)||(14892327-14892405)
chr2 (40-188)||(32545782-32545934)
chr2 (82-153)||(37762028-37762101)
chr2 (34-152)||(2893962-2894073)
chr2 (34-106)||(29508680-29508753)
chr2 (34-106)||(6722027-6722099)
chr2 (34-106)||(37961782-37961854)
chr2 (32-103)||(32545867-32545938)
chr2 (37-106)||(14470585-14470654)
chr2 (118-166)||(6721965-6722013)
chr2 (46-106)||(14229355-14229415)
chr2 (117-176)||(33018620-33018679)
chr2 (119-177)||(9173058-9173116)
chr2 (48-106)||(33018621-33018679)
chr2 (195-241)||(39310775-39310821)
chr2 (134-184)||(45213892-45213942)
chr2 (40-90)||(45213892-45213942)
chr2 (118-183)||(16514421-16514486)
chr2 (118-183)||(29508767-29508832)
chr2 (190-235)||(33760110-33760155)
chr2 (33-92)||(14892350-14892409)
chr2 (190-240)||(17994647-17994697)
chr2 (118-188)||(24115912-24115982)
chr2 (190-244)||(31128697-31128751)
chr2 (190-235)||(11985150-11985195)
chr2 (190-243)||(37876523-37876576)
chr2 (189-245)||(4904061-4904117)
chr2 (56-188)||(8534158-8534286)
chr2 (189-245)||(18107666-18107722)
chr2 (189-244)||(1421805-1421860)
chr2 (189-244)||(4264601-4264656)
chr2 (189-244)||(12554097-12554152)
chr2 (118-153)||(38933614-38933649)
chr2 (190-244)||(4778882-4778936)
chr2 (32-70)||(9172978-9173016)
chr2 (40-106)||(24115996-24116062)
chr2 (190-228)||(30399946-30399984)
chr2 (32-106)||(35204143-35204217)
chr2 (35-97)||(39819054-39819116)
chr2 (190-235)||(13014840-13014885)
chr2 (190-243)||(31210524-31210577)
chr2 (190-235)||(31788594-31788639)
chr2 (155-187)||(14229456-14229488)
chr2 (113-153)||(14464582-14464622)
chr2 (203-243)||(29173650-29173690)
[»] chr5 (72 HSPs)
chr5 (41-184)||(19655155-19655300)
chr5 (41-187)||(291094-291242)
chr5 (58-187)||(29699381-29699512)
chr5 (72-187)||(16971172-16971289)
chr5 (41-187)||(3899845-3899984)
chr5 (34-181)||(12913793-12913942)
chr5 (43-187)||(30117821-30117967)
chr5 (37-153)||(16439131-16439249)
chr5 (97-187)||(2356327-2356416)
chr5 (94-187)||(2953240-2953335)
chr5 (41-153)||(19598329-19598442)
chr5 (37-187)||(3180062-3180204)
chr5 (34-106)||(2953266-2953338)
chr5 (34-184)||(26662398-26662542)
chr5 (34-184)||(26933993-26934137)
chr5 (34-177)||(28818916-28819052)
chr5 (97-187)||(2093930-2094022)
chr5 (33-106)||(16971220-16971293)
chr5 (36-106)||(29699443-29699513)
chr5 (35-106)||(3899915-3899986)
chr5 (78-148)||(38134405-38134477)
chr5 (40-106)||(19655234-19655300)
chr5 (118-187)||(12913796-12913865)
chr5 (119-183)||(291094-291158)
chr5 (34-106)||(291173-291245)
chr5 (34-106)||(2093927-2093999)
chr5 (72-153)||(16802472-16802555)
chr5 (32-103)||(2356351-2356421)
chr5 (34-101)||(13312254-13312321)
chr5 (118-183)||(19655155-19655220)
chr5 (31-100)||(30117815-30117884)
chr5 (123-184)||(32485630-32485691)
chr5 (107-187)||(14167146-14167225)
chr5 (189-245)||(26878023-26878079)
chr5 (118-188)||(1638449-1638519)
chr5 (118-188)||(3180136-3180205)
chr5 (190-244)||(38597915-38597969)
chr5 (195-243)||(10722880-10722928)
chr5 (123-187)||(13312257-13312321)
chr5 (37-108)||(1638450-1638521)
chr5 (47-106)||(12913879-12913938)
chr5 (189-244)||(14082311-14082366)
chr5 (43-106)||(28818993-28819056)
chr5 (34-72)||(3180059-3180097)
chr5 (118-188)||(16439130-16439200)
chr5 (33-91)||(22082988-22083045)
chr5 (118-176)||(30117904-30117962)
chr5 (107-149)||(37325589-37325631)
chr5 (189-239)||(37986028-37986078)
chr5 (118-183)||(19598329-19598394)
chr5 (33-97)||(29385390-29385454)
chr5 (118-166)||(29699381-29699429)
chr5 (189-245)||(41630619-41630675)
chr5 (115-166)||(7009401-7009452)
chr5 (105-176)||(19272270-19272341)
chr5 (34-69)||(19598435-19598470)
chr5 (43-131)||(39031200-39031290)
chr5 (35-97)||(1839962-1840024)
chr5 (34-141)||(2935869-2935977)
chr5 (190-244)||(13007347-13007401)
chr5 (41-70)||(2953204-2953233)
chr5 (195-244)||(6012059-6012108)
chr5 (195-244)||(6217016-6217065)
chr5 (195-244)||(9113646-9113695)
chr5 (118-187)||(26662401-26662461)
chr5 (118-187)||(26933996-26934056)
chr5 (47-99)||(31147140-31147193)
chr5 (40-101)||(32485630-32485691)
chr5 (43-76)||(39777050-39777083)
chr5 (35-99)||(11983247-11983310)
chr5 (133-177)||(22083001-22083045)
chr5 (190-234)||(24229700-24229744)
[»] chr3 (62 HSPs)
chr3 (41-184)||(41752961-41753106)
chr3 (34-188)||(30734394-30734550)
chr3 (41-176)||(51046077-51046214)
chr3 (43-166)||(47492061-47492186)
chr3 (40-153)||(33689172-33689287)
chr3 (72-184)||(1801442-1801556)
chr3 (43-142)||(43139747-43139848)
chr3 (48-184)||(30580752-30580890)
chr3 (34-106)||(1801436-1801508)
chr3 (37-153)||(47677282-47677391)
chr3 (32-106)||(41753040-41753114)
chr3 (109-187)||(45103102-45103180)
chr3 (34-184)||(50524692-50524844)
chr3 (72-153)||(30476501-30476584)
chr3 (37-152)||(18321644-18321761)
chr3 (34-106)||(45103099-45103171)
chr3 (118-183)||(51046149-51046214)
chr3 (37-142)||(55223225-55223332)
chr3 (41-153)||(50549972-50550086)
chr3 (118-184)||(33689172-33689238)
chr3 (41-106)||(30734399-30734464)
chr3 (118-187)||(30734478-30734547)
chr3 (118-183)||(41752961-41753026)
chr3 (82-142)||(29031752-29031814)
chr3 (118-177)||(43139785-43139844)
chr3 (118-177)||(47492123-47492182)
chr3 (118-176)||(30580832-30580890)
chr3 (50-124)||(39057015-39057089)
chr3 (190-244)||(40487443-40487497)
chr3 (34-70)||(1272561-1272597)
chr3 (195-243)||(46220782-46220830)
chr3 (58-106)||(47492061-47492109)
chr3 (34-70)||(49414526-49414562)
chr3 (41-111)||(1801566-1801627)
chr3 (190-244)||(20987671-20987725)
chr3 (190-244)||(21533725-21533779)
chr3 (189-235)||(26275734-26275780)
chr3 (190-235)||(23799826-23799871)
chr3 (34-98)||(7977584-7977648)
chr3 (189-245)||(19339293-19339348)
chr3 (107-163)||(21024111-21024167)
chr3 (34-106)||(33689252-33689315)
chr3 (133-193)||(55223219-55223279)
chr3 (190-245)||(9998584-9998639)
chr3 (190-233)||(19619842-19619885)
chr3 (36-91)||(39429996-39430051)
chr3 (190-233)||(48199906-48199949)
chr3 (35-70)||(49418691-49418726)
chr3 (190-244)||(4711600-4711654)
chr3 (126-188)||(18321643-18321705)
chr3 (190-244)||(21431731-21431785)
chr3 (34-68)||(43139708-43139742)
chr3 (118-188)||(47677331-47677392)
chr3 (40-106)||(50524778-50524844)
chr3 (32-106)||(51046061-51046135)
chr3 (198-235)||(21313163-21313200)
chr3 (195-244)||(46304441-46304490)
chr3 (118-183)||(50549972-50550037)
chr3 (195-244)||(52923038-52923087)
chr3 (195-244)||(54149109-54149158)
chr3 (118-154)||(30476550-30476586)
chr3 (40-76)||(35538960-35538996)
[»] scaffold0586 (3 HSPs)
scaffold0586 (40-179)||(7048-7188)
scaffold0586 (118-184)||(7123-7188)
scaffold0586 (47-106)||(7050-7109)
[»] scaffold0016 (2 HSPs)
scaffold0016 (72-187)||(49696-49813)
scaffold0016 (32-106)||(49691-49765)
[»] scaffold0161 (3 HSPs)
scaffold0161 (41-183)||(27217-27361)
scaffold0161 (41-106)||(27217-27282)
scaffold0161 (121-183)||(27299-27361)
[»] chr6 (37 HSPs)
chr6 (37-187)||(17750896-17751047)
chr6 (37-187)||(24618594-24618737)
chr6 (41-174)||(12343106-12343232)
chr6 (34-139)||(24587451-24587558)
chr6 (43-153)||(551192-551304)
chr6 (34-188)||(17750895-17751050)
chr6 (89-187)||(13043502-13043602)
chr6 (41-106)||(24975749-24975814)
chr6 (72-153)||(10521876-10521959)
chr6 (116-187)||(7384481-7384552)
chr6 (34-153)||(2315331-2315443)
chr6 (118-187)||(24587454-24587523)
chr6 (117-183)||(24975749-24975815)
chr6 (34-103)||(24618591-24618660)
chr6 (34-115)||(31654304-31654376)
chr6 (50-106)||(12343176-12343232)
chr6 (34-106)||(13043533-13043605)
chr6 (118-177)||(551241-551300)
chr6 (190-244)||(33053084-33053138)
chr6 (195-244)||(4010433-4010482)
chr6 (195-236)||(29255367-29255408)
chr6 (34-106)||(7384478-7384550)
chr6 (190-245)||(3913490-3913545)
chr6 (189-244)||(20225971-20226026)
chr6 (189-244)||(22119955-22120010)
chr6 (118-153)||(24618677-24618712)
chr6 (118-153)||(31654332-31654367)
chr6 (190-244)||(127789-127843)
chr6 (197-227)||(13546624-13546654)
chr6 (190-244)||(23128738-23128792)
chr6 (37-70)||(10521851-10521884)
chr6 (195-236)||(30608436-30608477)
chr6 (195-244)||(34018680-34018729)
chr6 (34-70)||(551164-551200)
chr6 (189-245)||(1523527-1523583)
chr6 (189-245)||(9380142-9380198)
chr6 (43-71)||(13766746-13766774)
[»] scaffold0047 (1 HSPs)
scaffold0047 (41-153)||(63763-63868)
[»] scaffold0180 (2 HSPs)
scaffold0180 (97-188)||(19114-19207)
scaffold0180 (37-106)||(19115-19184)
[»] scaffold1033 (1 HSPs)
scaffold1033 (96-151)||(2265-2322)
[»] scaffold1029 (1 HSPs)
scaffold1029 (96-151)||(2265-2322)
[»] scaffold0481 (1 HSPs)
scaffold0481 (95-153)||(2914-2974)
[»] scaffold0536 (1 HSPs)
scaffold0536 (109-161)||(4911-4963)
[»] scaffold0128 (1 HSPs)
scaffold0128 (197-244)||(36944-36991)
[»] scaffold0121 (1 HSPs)
scaffold0121 (189-244)||(31189-31244)
[»] scaffold0017 (1 HSPs)
scaffold0017 (189-244)||(32662-32717)
[»] scaffold0136 (1 HSPs)
scaffold0136 (197-236)||(38183-38222)
[»] scaffold0050 (1 HSPs)
scaffold0050 (189-244)||(65957-66012)
[»] scaffold0127 (1 HSPs)
scaffold0127 (190-244)||(15611-15665)
[»] scaffold0262 (1 HSPs)
scaffold0262 (195-244)||(1740-1789)
[»] scaffold0031 (1 HSPs)
scaffold0031 (126-154)||(105402-105430)


Alignment Details
Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 5033158 - 5033306
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  5033158 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 5033257  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  5033258 attggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 5033306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 35441110 - 35440962
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  35441110 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 35441011  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||| ||||| |||||||||    
T  35441010 attggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 35440962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 33841732 - 33841584
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  33841732 acttgggtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacaatgtg 33841633  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  33841632 attggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 33841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 5667086 - 5667238
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtg 130  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||| |||||||||||| ||  ||||||||||||||||||| ||    
T  5667086 cgggtagcacttgggtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgtatttctctctctttcacaagcattatg 5667185  T
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||| ||||| ||||||||| ||||||||| ||||||||||||| |||||    
T  5667186 acattgtaattggccaatgtcaccaatgtcatcaaactctatgtcacccaagt 5667238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 10086754 - 10086891
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||| ||||||||||||  ||||| ||| ||||||||||| || |||| |||||||||||  |||||||||| |||||||||||||||    
T  10086754 acttgggtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtg 10086853  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  10086854 attggtcaatgtcaccaatgtcacccaactctatgtca 10086891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 8243529 - 8243415
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  8243529 acttgggtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtg 8243430  T
Q  139 attggtcaatgtcac 153  Q
    |||| ||||||||||    
T  8243429 attgatcaatgtcac 8243415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 8796418 - 8796568
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctct--ctttcacaagcattgtgacattgt 137  Q
    |||||||||||||||||||| ||||| |||  ||| | ||| ||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  8796418 cacttgggtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtgtttctctatctttcacaagcattgtgacatttt 8796517  T
Q  138 gattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||||||||||||||| ||| ||| | | |||||||||||||| |||||||    
T  8796518 gattggtcaatgtcaccaatatcacctagctctatgtcacacatgtgctat 8796568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 4958593 - 4958743
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacat 134  Q
    ||||||||| |||||||||| || | ||| |||||||||| ||||||||||||||| || |||| ||||||||||||||  |||||||| |||||||| |    
T  4958593 tagcacttgtgtgacatagaatttg-tgatattgatgacattggccaatcacaatgtcataatgtttgtgtttctctctctttcacaagtattgtgac-t 4958690  T
Q  135 tgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||    
T  4958691 tgtgattggtcaatgtcactaatatcatctaactctatgtcacgcaagtgcta 4958743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 45191268 - 45191123
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||| ||| |||| ||||| || ||||||| ||||  |||||| ||||||||||||||  |||| |||||||||| |||||||    
T  45191268 acttgggtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtgtttctctctctttcataagcattgtggcattgtg 45191169  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||  |||||||||| ||| ||||||||||||||||||| ||||||    
T  45191168 attaatcaatgtcaccaatatcatccaactctatgtcacccaagtg 45191123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 183
Target Start/End: Complemental strand, 5033312 - 5033158
Alignment:
Q  31 gacgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattg 128  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||             |||||||||||    
T  5033312 gacgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 5033213  T
Q  129 tgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    || |||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  5033212 tggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 5033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 39850983 - 39851101
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||| | | ||||||||||||||||||||| |||||||  |||||     
T  39850983 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattataatattgtgattggtcaatgtcaccaatgtcactcaactt 39851082  T
Q  170 tatgtcacacaagtgctat 188  Q
    |||||||  ||||||||||    
T  39851083 tatgtcatccaagtgctat 39851101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 2581822 - 2581895
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctc 114  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  2581822 acttgggtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtgtttctctc 2581895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 6296602 - 6296740
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgt 129  Q
    ||||||||||||||| ||||||||||||||||||||||||         |||||||||||| || ||||||||||||||||  ||||||||||| |||||    
T  6296602 acgggtagcacttggatgacatagagttgggtgacattga---------ccaatcacaatgtcataatgcttgtgtttctctctctttcacaagtattgt 6296692  T
Q  130 gacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||| | ||||   |||||||| |||||||||||||||||| ||||    
T  6296693 gacattataattgactaatgtcactaatgtcatccaactctatatcac 6296740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 34229634 - 34229752
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacat 134  Q
    ||||||||| |||||||||||||||||||||||  |||||   | ||||||||||| || ||||||||||||||||  ||||||||||||||||||| ||    
T  34229634 tagcacttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtgtttctctctctttcacaagcattgtgatat 34229733  T
Q  135 tgtgattggtcaatgtcac 153  Q
    ||||||||  |||||||||    
T  34229734 tgtgattgaccaatgtcac 34229752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 43844614 - 43844475
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgacattg 136  Q
    ||||| ||||||||||||||||||| |||||||| ||| | ||  ||||||||||| |||||||||||||||||||||| ||||||||||  |||||||     
T  43844614 tagcaattgggtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtgtttctctctctcacaagcatcctgacatta 43844515  T
Q  137 tgattggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    |||||   |||| |||  ||| ||| ||||||||||||||    
T  43844514 tgattaaccaatatcatcaatatcacccaactctatgtca 43844475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 33841580 - 33841732
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtg 130  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| || |||||||||||||             |||||||||||||    
T  33841580 cgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 33841679  T
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
     |||| ||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  33841680 gcattctgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 33841732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 35440958 - 35441110
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtg 130  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||| |||||||||||||             |||||||||||||    
T  35440958 cgggtagcacttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 35441057  T
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
     |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  35441058 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 35441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 5667158 - 5667090
Alignment:
Q  119 acaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||    
T  5667158 acaagcattgtgacattgtgattgaccaatgtcaccaatgtcatccaactctatgtcacccaagtgcta 5667090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 22649842 - 22649908
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgt 107  Q
    |||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  22649842 acttgggtgacatagagttgagtgacattggtgacattggctaatcacaatgccacaatgcttgtgt 22649908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 43844545 - 43844615
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| ||| ||||||    
T  43844545 cacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctatgtcacccaattgctat 43844615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 34541896 - 34541830
Alignment:
Q  89 aatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||| |||||||||    
T  34541896 aatgccacaatgcttgtgtttctctctctttcacaagcattgtgatattatgattggccaatgtcac 34541830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 34229703 - 34229633
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||||||||| ||||||||||||||    ||||||| ||||||| ||||||||||||||||||||||||||    
T  34229703 cacaagcattctgacattgtgattgactcatgtcactaatgtcacccaactctatgtcacacaagtgctat 34229633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 45191203 - 45191268
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| |||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  45191203 cacaaacattgtaacattttgattggtcaatgtcaccaatatcatccaactctatgtcacccaagt 45191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 5046923 - 5046884
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaata 234  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5046923 tgcctacaaataatatgataaattctaagtcactgaaata 5046884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 8796484 - 8796418
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||||||||||||  |||| |||||||| ||| | ||||||||||||| ||||||    
T  8796484 cacaagcattgtgacattgtgattgaccaatatcacaaatatcacctaactctatgtcacccaagtg 8796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 10086891 - 10086833
Alignment:
Q  48 tgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||| ||||| || |||||||||||| ||||||| |||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtg 10086833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 33347434 - 33347488
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  33347434 acaaaatgcctacaaataatatgataaattctgagtcaccgaaatacccatgctt 33347488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 2581887 - 2581822
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||||| ||||||||  ||||||| |||| |||||||||| |||||    
T  2581887 cacaagcattgtggcattgtgattggccaatgtcaacaatgtcacccaattctatgtcacccaagt 2581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 5667238 - 5667173
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||| | |||||||| ||||| |||||||| |||||| || ||||||||||    
T  5667238 acttgggtgacatagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtg 5667173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 8243464 - 8243529
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||||  ||| ||||| ||||||| ||||||||||||||| |||||    
T  8243464 cacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctatgtcacccaagt 8243529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 22649907 - 22649842
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||| | ||||||||| |||||||  |||||||||||||| |||||    
T  22649907 cacaagcattgtggcattgtgattagccaatgtcaccaatgtcactcaactctatgtcacccaagt 22649842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 45191117 - 45191186
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgctt 103  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||| ||   |||||||||||||||||||||    
T  45191117 gggtaacacttgggtgacatagagttggatgatattggtgacattgattaatcacaatgccacaatgctt 45191186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 8243387 - 8243450
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||    
T  8243387 gggtagcacttgggtgacatagagttgagtgacattgat---------caatcacaatgccacaatgcttgtg 8243450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 35031685 - 35031641
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  35031685 tctctctttcacaagcattgcgacattgtgattgatcaatgtcac 35031641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 23230819 - 23230764
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||  ||||||||| |||||||| |||||||    
T  23230819 acaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttc 23230764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 1880229 - 1880349
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaa--tgcttgtgtttctctctttcacaagcattgtga 131  Q
    ||||||||||||||||||||||| || ||||||| || ||||| || |||||||||||| || ||   || | | || |||||||||| ||| | |||||    
T  1880229 gggtagcacttgggtgacatagaatt-ggtgacactggtgacattgaccaatcacaatgtcataaatggccttttttgctctctttcataaggactgtga 1880327  T
Q  132 cattgtgattggtcaatgtcac 153  Q
    |||||||||||  |||||||||    
T  1880328 cattgtgattgaccaatgtcac 1880349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 1880289 - 1880232
Alignment:
Q  129 tgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||||||||||||| | ||||| |||| |||||||||| |||||||||    
T  1880289 tgacattgtgattggtcaatgtcaccagtgtca-ccaattctatgtcacccaagtgcta 1880232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 7883155 - 7883209
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| |||||||| |||||||    
T  7883155 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttc 7883209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 10086819 - 10086754
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| |||| ||||||||||||||  ||||||||| ||||||| |||| |||||||||| |||||    
T  10086819 cacaaacattatgacattgtgattgaccaatgtcactaatgtcacccaattctatgtcacccaagt 10086754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 24186575 - 24186628
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||| |||||| ||||||||||||||| | ||||||||||||||||| ||||||    
T  24186575 caaaatgcctataaataatatgataaaatttaagtcactgaaatacccatgctt 24186628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 34541801 - 34541838
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34541801 cgggtagcacttgggtgacataaagttgggtgacattg 34541838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 31159918 - 31159962
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||    
T  31159918 tctctctttcacaagcattgtgacattatgattggcgaatgtcac 31159962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 41684552 - 41684504
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||||||||||||||||||||| |||||||||  |||||||| ||||||    
T  41684552 tgcctacaaataatatgataaaatctaagtcatcgaaatacccatgctt 41684504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 6296667 - 6296632
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||| |||||||||||||||||||||||||    
T  6296667 cacaagcattatgacattgtgattggtcaatgtcac 6296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 39851105 - 39851046
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaat 91  Q
    |||| |||||||||| ||||||| ||||| ||||||||| ||||| || |||||||||||    
T  39851105 acggatagcacttggatgacataaagttgagtgacattggtgacattgaccaatcacaat 39851046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 4958661 - 4958592
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||| |||| ||||||||||||||| ||||||||  ||| ||| | || |||||||||||||||||||||    
T  4958661 cacaaacattatgacattgtgattggccaatgtcatcaatatca-caaattctatgtcacacaagtgctat 4958592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 16928671 - 16928717
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacc 236  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||||    
T  16928671 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatacc 16928717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 20553155 - 20553209
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| |||||||  |||||||    
T  20553155 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatactcatgcttc 20553209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 27110387 - 27110433
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||| ||||||||||| ||||||  |||||||    
T  27110387 ctacaaataatatgataaaatctaagtcactaaaatacacatgcttc 27110433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 31013522 - 31013576
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   ||||||||||||||||  |||||||    
T  31013522 caaaatgcctacaaataatatgataaaacttaagtcactgaaatacacatgcttc 31013576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 41060176 - 41060230
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    ||||| || ||||||||||||||||||| ||||||||  ||||||| ||||||||    
T  41060176 acaaaatggctacaaataatatgataaaatctaagtctatgaaatatctatgctt 41060230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 45445724 - 45445762
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcac 227  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  45445724 acaaaatgcctacaaataatatgataaaatctaagtcac 45445762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 8796567 - 8796498
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||| || ||||||||||| | ||||| |||| ||||| || ||||||| |||| |||||||||||||    
T  8796567 tagcacatgtgtgacatagagctaggtgatattggtgacattgaccaatcaaaatgtcacaatgcttgtg 8796498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 29939467 - 29939430
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||||||||||||||||||  |||||||||||||||||    
T  29939467 ctacaaataatatgataaaacctaagtcactgaaatac 29939430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 18890612 - 18890668
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| |||||||||||||||||||||| ||||| ||||   |||||||||| ||||    
T  18890612 acaaaatgcctacaaataatatgataaaatctaaatcaccataatacctatgtttct 18890668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 28086725 - 28086773
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattct-aagtcactgaaatacc 236  Q
    ||||| |||||||||||||||||||||| ||| || |||||||||||||    
T  28086725 acaaaatgcctacaaataatatgataaaatctaaaatcactgaaatacc 28086773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 37618798 - 37618754
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||| | ||||| ||||||||||||||||||| |||||||||    
T  37618798 tctctctcttacaaggattgtgacattgtgattggccaatgtcac 37618754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 11016866 - 11017014
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  11016866 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattgtg 11016965  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  11016966 attggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 11017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 4290542 - 4290690
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||| |||| ||| | ||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||    
T  4290542 acttgggtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgctcgtgtttctctctctttcacaagaattgtgacattgtg 4290641  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||| ||||||||| ||||||| |||||| |||||||| |||||||||    
T  4290642 attggccaatgtcaccaatgtcacccaactgtatgtcacccaagtgcta 4290690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 38975802 - 38975940
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |     
T  38975802 acttgggtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattata 38975901  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||| |||||||||| ||||||| | |||||||||||||    
T  38975902 attgatcaatgtcaccaatgtcacctaactctatgtcac 38975940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 34854836 - 34854722
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttc--tctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||    
T  34854836 acttgggtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtgtttctatctctttcacaagcattgtggcattgtg 34854737  T
Q  139 attggtcaatgtcac 153  Q
    ||||| |||||||||    
T  34854736 attggccaatgtcac 34854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 41018369 - 41018255
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||    
T  41018369 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtg 41018270  T
Q  139 attggtcaatgtcac 153  Q
    ||||| |||||||||    
T  41018269 attggccaatgtcac 41018255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 15027539 - 15027661
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||||||| |||||||||||  |||||||| ||||| || ||||||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||    
T  15027539 acttgggtaacatagagttgtttgacattggtgacattgaccaatcacaataccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtg 15027638  T
Q  139 attggtcaatgtcacaaatgtca 161  Q
    ||||||||||||||| |||||||    
T  15027639 attggtcaatgtcaccaatgtca 15027661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 42628303 - 42628440
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgat 140  Q
    |||||||||||||||||||||||||||||         ||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||    
T  42628303 ttgggtgacatagagttgggtgacattga---------ccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgat 42628393  T
Q  141 tggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||| |||| |||| ||||||| ||||||||||||||| |||||||||    
T  42628394 tggccaatatcaccaatgtcacccaactctatgtcacccaagtgcta 42628440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 48000771 - 48000879
Alignment:
Q  78 tggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtc 175  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||  ||||||| |||||||||||||||||||||| ||||||| ||||||||||||     
T  48000771 tggccaatcacaatgccacaatgtttgtgtttctctctctttcacagacattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtg 48000870  T
Q  176 acacaagtg 184  Q
    || ||||||    
T  48000871 acccaagtg 48000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 11017019 - 11016866
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgt 129  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||||| |||||             ||||||||||||    
T  11017019 acgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgt 11016920  T
Q  130 gacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    | |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  11016919 ggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 11016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 45231991 - 45231881
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||| |||||||  |||||||||||     ||| |||||||    
T  45231991 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgcttttgtttctctctctttcacaa----agtggcattgtg 45231896  T
Q  139 attggtcaatgtcac 153  Q
    |||||||||||||||    
T  45231895 attggtcaatgtcac 45231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 29053446 - 29053341
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||  ||||||||||||||||| | |||||||    
T  29053446 acttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgaggcattgtg 29053356  T
Q  139 attggtcaatgtcac 153  Q
    ||||| |||||||||    
T  29053355 attggccaatgtcac 29053341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 4290695 - 4290621
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |||||| ||||||    
T  4290695 acgggtagcacttgggtgacatacagttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtg 4290621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 7672021 - 7671938
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||||||  ||||||||    
T  7672021 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggctaatgtcac 7671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 42628443 - 42628371
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| | |||||||||||    
T  42628443 gggtagcacttgggtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtg 42628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 27028929 - 27028831
Alignment:
Q  46 ggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattg 142  Q
    ||||||||||| ||||||||  ||| ||||| ||| ||||||||||| ||||||| ||||||||||  |||||||| ||||||||||||||||||||||    
T  27028929 ggtgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtgtttctctctctttcagaagcattgtgacattgtgattg 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 41945844 - 41945997
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtg 130  Q
    |||||||||||| | ||||||||| ||| ||||||||||||||| | | |||||| |||| || |||| ||| |||| |  ||||||||||||||||||     
T  41945844 cgggtagcacttagatgacatagaattgagtgacattgatgacattagtcaatcataatgtcataatgtttgcgtttttttctctttcacaagcattgta 41945943  T
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||||||  |||| | || |||||||  ||||| |||||||| ||||||    
T  41945944 acattgtgattgaccaatattaccaatgtcactcaactttatgtcacccaagtg 41945997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 48000765 - 48000691
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  48000765 tctctctttcacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactcaatgtcacccaagt 48000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 27028719 - 27028795
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct 111  Q
    |||||||||| ||||||||| ||||| ||||||||| ||||| ||| ||||||||||| ||||||||||||||||||    
T  27028719 ggtagcactttggtgacatatagttgagtgacattggtgacattggacaatcacaatgtcacaatgcttgtgtttct 27028795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 48000887 - 48000819
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatg 100  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  48000887 acgggtaacacttgggtcacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatg 48000819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 41018307 - 41018369
Alignment:
Q  121 aagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  41018307 aagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 41018369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 4649328 - 4649433
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc----tctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||| |         |||||||||||| ||||||||||||||||||    |||||||||||||| |||||||||||    
T  4649328 ttgggtgacatagagttgggtgacattggt---------caatcacaatgctacaatgcttgtgtttctctctctctttcacaagcatcgtgacattgtg 4649418  T
Q  139 attggtcaatgtcac 153  Q
    ||||  |||||||||    
T  4649419 attgaccaatgtcac 4649433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 48000691 - 48000756
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||| |||||||||||||||| ||||| ||  |||||||||||||||||||||||||    
T  48000691 acttgggtgacattgagttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtg 48000756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 45231929 - 45231991
Alignment:
Q  121 aagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||| ||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  45231929 aagcattgtaacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 45231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 27028790 - 27028721
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||||||||  ||||||||| |||||||  ||||| ||||||||  ||||||||    
T  27028790 cacaagcattgtgacattgtgattgtccaatgtcaccaatgtcactcaactatatgtcaccaaagtgcta 27028721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 34854771 - 34854836
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| ||||||| |||||||||||  ||||||||| ||||||| ||||||||||||||| |||||    
T  34854771 cacaaacattgtggcattgtgattgaccaatgtcaccaatgtcacccaactctatgtcacccaagt 34854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 38975867 - 38975802
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||||  |||||| || ||||||| ||||||||||||||| |||||    
T  38975867 cacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctatgtcacccaagt 38975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5348513 - 5348553
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  5348513 tgcctacaaataatatggtaaattctaagtcactgaaatac 5348553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 19404679 - 19404727
Alignment:
Q  196 gcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  19404679 gcctacaaataatatgataaaatctaagtcactgaaatactcatgcttc 19404727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 22764820 - 22764753
Alignment:
Q  62 gtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcatt 127  Q
    ||||||||| ||| | ||||||||||||||| ||||||| ||||||||||  ||||||||||||||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcatt 22764753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 38975953 - 38975881
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||| ||||| |||||||||||||| |||||||||| ||||| ||  |||| | ||||||||||||||||||    
T  38975953 gggtaacacttaggtgacatagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtg 38975881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 12141224 - 12141278
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||| |||||||||||||||||| |||||||||| |||||||| |||||||    
T  12141224 caaaatgcatacaaataatatgataaaatctaagtcaccgaaatacccatgcttc 12141278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 30217588 - 30217504
Alignment:
Q  47 gtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtg 130  Q
    ||||||||||||| | |||||||||||||| | ||||||||||||  || |||| || |||||||  |||||||||||||||||||    
T  30217588 gtgacatagagtttg-tgacattgatgacattcgccaatcacaatatcaaaatgtttatgtttctctctctttcacaagcattgtg 30217504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 39171506 - 39171560
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| |||||||| |||||||    
T  39171506 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttc 39171560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 41018225 - 41018263
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  41018225 acgggtagcacttggatgacatagagttgggtgacattg 41018263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 15027604 - 15027539
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| |||||||  ||||||||||||||||||||| |||||||  ||||||||||| || |||||    
T  15027604 cacaaacattgtggtattgtgattggtcaatgtcaccaatgtcaaacaactctatgttacccaagt 15027539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 39229184 - 39229135
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||| ||||||||||||||||||| |||||||||  |||||||    
T  39229184 tgcctacaaattatatgataaattctaagtccctgaaatacacatgcttc 39229135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 45231853 - 45231890
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattga 71  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45231853 gggtaacacttgggtgacatagagttgggtgacattga 45231890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 40993333 - 40993277
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| ||||||||||||||||||||||   |||||||| |||||||| ||||||||    
T  40993333 acaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttct 40993277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 34854695 - 34854757
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||| |||||||||||||||||||| ||||||||||         |||||||||||||||||||||||||||    
T  34854695 ggtaacacttgggtgacatagagtttggtgacattg---------gccaatcacaatgccacaatgcttgtg 34854757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 38798956 - 38798913
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaat 233  Q
    |||| |||||||||||||||||||||| |||||||||| |||||    
T  38798956 caaaatgcctacaaataatatgataaaatctaagtcaccgaaat 38798913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 9450053 - 9450107
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  |||| ||||| ||||||| |||||||    
T  9450053 caaaatgcctacaaataatatgataaaacctaaatcactaaaatacccatgcttc 9450107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 41084253 - 41084207
Alignment:
Q  107 tttctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||||||| ||||||| ||| |||||| ||||||||||    
T  41084253 tttctctctttcacaaggattgtgatattatgattgatcaatgtcac 41084207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 41945997 - 41945931
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||| ||||| ||||||||| | | | ||| |||||||||||  ||||||||||||    
T  41945997 cacttgggtgacataaagttgagtgacattggtaatattggtcaatcacaatgttacaatgcttgtg 41945931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 46700210 - 46700156
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| |||||| ||||||||||||||| |||||||||| |||||| | |||||||    
T  46700210 caaaatgcctataaataatatgataaaatctaagtcaccgaaatatccatgcttc 46700156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 4290603 - 4290542
Alignment:
Q  122 agcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||| |||||||||||  |||| |||| ||| ||| ||||||||||||||| |||||    
T  4290603 agcattgtggcattgtgattgaccaatatcaccaatatcacccaactctatgtcacccaagt 4290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 25287110 - 25287155
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    ||||||||||||||||||| |||||||||| |||||| | ||||||    
T  25287110 ctacaaataatatgataaaatctaagtcaccgaaatatccatgctt 25287155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 27028795 - 27028828
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||||||| ||||||    
T  27028795 tagcacttgggtgacatagagttgggtaacattg 27028828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 10419486 - 10419569
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||| |||||| ||||  ||||| ||||||||||||  |||||||||||  |||||||||||||||  | |||||||||    
T  10419486 tgacattggtcaatcataatgttacaatacttgtgtttctctctctttcacaagttttgtgacattgtgatcagccaatgtcac 10419569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 48994058 - 48993910
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  48994058 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 48993959  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  48993958 attggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 48993910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 29179738 - 29179590
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  29179738 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 29179639  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||| |||||| ||||||| ||||||||||||||  |||||||||    
T  29179638 attggtcagtgtcaccaatgtcacccaactctatgtcatccaagtgcta 29179590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 5995366 - 5995511
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||| | |||||||| | ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  5995366 acttgggtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtg 5995465  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  5995466 attggtcaatgtcaccaatgtcatccaactctatgtcacccaagtg 5995511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 17127706 - 17127561
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgt 137  Q
    ||||||||||| |||||||| |||||||||  ||||| || ||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  17127706 cacttgggtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 17127607  T
Q  138 gattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||||||| ||||||| | |||||||| ||||||||||    
T  17127606 gattggtcaatgtcactaatgtcacctaactctatatcacacaagt 17127561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 49445043 - 49444906
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgacattgtgat 140  Q
    ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  49445043 acttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgcttgtgtttctctctctcacaagcattgtaacattgtgat 49444953  T
Q  141 tggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    || || ||||||| ||||||| ||||||||||||||| |||||||||    
T  49444952 tgatcgatgtcaccaatgtcacccaactctatgtcacccaagtgcta 49444906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 32540895 - 32540755
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgac 132  Q
    |||||||||||||||||||||| |||| |||||||| ||||| || ||||||||||||  |||||||||||||||||  |||||||||||||||||||||    
T  32540895 ggtagcacttgggtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtgtttctctctctttcacaagcattgtgac 32540796  T
Q  133 attgtgattggtcaatgtcacaaatgtcatccaactctatg 173  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||    
T  32540795 attgtgattggccaatgccaccaatgtcacccaactctatg 32540755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 37155043 - 37155157
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||    
T  37155043 acttgggtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagtattgtgacattgtg 37155142  T
Q  139 attggtcaatgtcac 153  Q
    ||||| |||||||||    
T  37155143 attggccaatgtcac 37155157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 29371396 - 29371514
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| ||||||||||||||| ||||||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||| | | |||    
T  29371396 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctc 29371495  T
Q  170 tatgtcacacaagtgctat 188  Q
    |||||||||||||||||||    
T  29371496 tatgtcacacaagtgctat 29371514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 44706923 - 44706810
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgaca-ttgtga 139  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| || ||||||    
T  44706923 ttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcattgtggcatttgtga 44706824  T
Q  140 ttggtcaatgtcac 153  Q
    |||| |||||||||    
T  44706823 ttggccaatgtcac 44706810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 9157306 - 9157447
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgt 137  Q
    |||||| |||||||||||||||||||||||| | ||| || |||||||||||| ||||||||||||||||||||||  ||| |||||||||||| |||||    
T  9157306 cacttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttctcaagcattgtgatattgt 9157405  T
Q  138 gattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||| |||||||||          ||||||||||||||||||||||||||    
T  9157406 gattgatcaatgtcaa---------ccaactctatgtcacacaagtgctat 9157447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 48498412 - 48498526
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||  ||||| ||| |||||| ||| |||||||| |||||||  |||||||||||||||||| || ||||||||    
T  48498412 acttgggtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtgtttctctctctttcacaagcatggtaacattgtg 48498511  T
Q  139 attggtcaatgtcac 153  Q
    |||||||||||||||    
T  48498512 attggtcaatgtcac 48498526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 33219611 - 33219716
Alignment:
Q  82 caatcacaatgccacaatgcttgtgttt--ctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacac 179  Q
    |||||||||||  |||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| || |    
T  33219611 caatcacaatgttacaatgcttgtgtttttctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatgtcatccaactctatgttaccc 33219710  T
Q  180 aagtgc 185  Q
    ||||||    
T  33219711 aagtgc 33219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 1091686 - 1091582
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgt 137  Q
    |||||||||||||||||||||||||| |||| ||||  || |||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  1091686 cacttgggtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgt 1091587  T
Q  138 gattg 142  Q
    |||||    
T  1091586 gattg 1091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 48993907 - 48994058
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtga 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||             |||||||||||||     
T  48993907 gggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 48994006  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  48994007 cattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 48994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 46931994 - 46932123
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgacattgtgat 140  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||             | ||||||| |||||||||    
T  46931994 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtt-------------aacattgtggcattgtgat 46932080  T
Q  141 tggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  46932081 tggtcaatgtcaccaatgtca-ccaactctatgtcacccaagtg 46932123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 15220813 - 15220956
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacat 134  Q
    ||||||||||||||||| |||||||||||||||| |         ||||||| ||  |||||||||||||||||||  ||||||||||||||||||| ||    
T  15220813 tagcacttgggtgacatggagttgggtgacattggt---------caatcacgatctcacaatgcttgtgtttctctctctttcacaagcattgtgagat 15220903  T
Q  135 tgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||| |||| |||| ||||||| ||||||||||||||| ||| |||||    
T  15220904 tgtgattggccaatatcaccaatgtcacccaactctatgtcacccaaatgcta 15220956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 34062217 - 34062320
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgat 140  Q
    ||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||    
T  34062217 ttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgcttatgtttctctctctttcacaaacattgtgacattgtgat 34062307  T
Q  141 tggtcaatgtcac 153  Q
    |||||||||||||    
T  34062308 tggtcaatgtcac 34062320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 4608989 - 4609107
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacat 134  Q
    ||||||||| |||| || |||||||||||||| | ||||| || || ||||||||| ||||||| |||||||  ||||||||||||||||||||||||||    
T  4608989 tagcacttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacat 4609088  T
Q  135 tgtgattggtcaatgtcac 153  Q
    ||||||||  |||||||||    
T  4609089 tgtgattgaccaatgtcac 4609107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 38674607 - 38674532
Alignment:
Q  78 tggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  38674607 tggccaatcataatgtcacaatgcttgtgtttctctctttcacaagcattgtgacattgtgattggccaatatcac 38674532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 29179585 - 29179738
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgt 129  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||             ||||||||||||    
T  29179585 acgggtagcacttggatgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgt 29179684  T
Q  130 gacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    | |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  29179685 ggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 29179738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 46334078 - 46333974
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgttt--ctctctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  46334078 acttgggtgacatagagttggatgacattga---------ccaatcacaatgtcacaatgcttgtgtttttctctctttcacaagcattgtgacattgtg 46333988  T
Q  139 attggtcaatgtca 152  Q
    ||||| ||||||||    
T  46333987 attggccaatgtca 46333974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 8337983 - 8337878
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||    
T  8337983 acttgggtgacatagagttgggtgacattga---------ccaatcacaatgccacaatgtttgtgtttctctctctttcacaaacattgtgacattgtg 8337893  T
Q  139 attggtcaatgtcac 153  Q
    ||||  |||||||||    
T  8337892 attgaccaatgtcac 8337878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 5995519 - 5995445
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||    
T  5995519 acgggtaacacttgggtgacatagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtg 5995445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 9157372 - 9157306
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  9157372 cacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctatgtcacacaagtg 9157306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 36290557 - 36290456
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgt 129  Q
    |||| ||| |||||||||||||||||||||||||||||| || || || |||||||||||| ||||||  ||||||||||  ||||||||||||||||||    
T  36290557 acggatagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaatatttgtgtttctctctctttcacaagcattgt 36290458  T
Q  130 ga 131  Q
    ||    
T  36290457 ga 36290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 19711320 - 19711207
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgacattgtga 139  Q
    ||||| ||||| ||| |||| |||||||||| | ||| ||||  || |||||| |||||| ||| ||||||||||||||||| ||||||| |||||||||    
T  19711320 cacttaggtgatataaagtttggtgacattggtaacattggctgattacaatgtcacaattcttatgtttctctctttcacatgcattgtaacattgtga 19711221  T
Q  140 ttggtcaatgtcac 153  Q
    ||||||||||||||    
T  19711220 ttggtcaatgtcac 19711207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 28395627 - 28395708
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct 115  Q
    |||||||| |||||| ||||||||||| ||||||||| ||||| || |||||||||||| ||||||||||||||||||||||    
T  28395627 gggtagcatttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctct 28395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 32540824 - 32540893
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  32540824 cacaagcattgtaacattgtgattggtcaatgtcaccaatgtcatccaattctatgtcacccaagtgcta 32540893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 741600 - 741529
Alignment:
Q  84 atcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  741600 atcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgggcaatgtcac 741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 21630038 - 21630113
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct 115  Q
    |||||| |||||||| ||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||    
T  21630038 cacttgcgtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctct 21630113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 45728294 - 45728396
Alignment:
Q  51 catagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtgattggtcaat 148  Q
    ||||||||||||||| |||| ||| | || |||||||||||  |||||||||||||||  ||||||||||||||||||| ||||||||||||||  ||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaagcattatgacattgtgattgaccaat 45728393  T
Q  149 gtc 151  Q
    |||    
T  45728394 gtc 45728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 21630104 - 21630038
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||    
T  21630104 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactttatgtcacgcaagtg 21630038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 15220959 - 15220887
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||  |||||||||||||    
T  15220959 gggtagcatttgggtgacatagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtg 15220887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 28395699 - 28395630
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| || ||| |||||    
T  28395699 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcactcaactctatgttacccaaatgcta 28395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 37155108 - 37155043
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| |||||    
T  37155108 cacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaactctatgtcacccaagt 37155043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 46932129 - 46931994
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgaca 133  Q
    ||||| |||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||              |  ||||| ||||||| ||    
T  46932129 gggtaacacttgggtgacatagagttgg-tgacattggtgacattgaccaatcacaatgccacaatg-------------ttaacacaaacattgtggca 46932044  T
Q  134 ttgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  46932043 ttgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 46931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 49444903 - 49444975
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |  |||||||||||  ||||||||||||    
T  49444903 gggtagcacttgggtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg 49444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 36290490 - 36290553
Alignment:
Q  125 attgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||| ||||    
T  36290490 attgtgacattgtgattggtcaatgccaccaatgtcacccaactctatgtcacccaagtactat 36290553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 1091620 - 1091686
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||| |||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||| ||||||    
T  1091620 cacaaacattgtgacattgtgattggtcaaagtcaccaatatcacccaactctatgtcacccaagtg 1091686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 1819573 - 1819516
Alignment:
Q  98 atgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  1819573 atgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtcac 1819516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 4609058 - 4608988
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||| ||||||||||||||||| ||||||||||||  |||||| ||||||| || |||||||||||||||    
T  4609058 cacaaacattgtgacattgtgatgggtcaatgtcaccgatgtcacccaactccatatcacacaagtgctat 4608988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 17127640 - 17127706
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| | |||||||| |||| ||||||    
T  17127640 cacaagcattgtgacattttgattggtcaatgtcactaatgtcacctaactctatatcacccaagtg 17127706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 5995431 - 5995366
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||||| |||||| || ||||||||| ||||||||||||| |||||    
T  5995431 cacaagcattgtggcattgtgattggccaatgttaccaatgtcatcaaactctatgtcacccaagt 5995366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 31342259 - 31342311
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatg 92  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  31342259 cacttgggtgacatagagttgggtgacaccgatgacattggccaatcacaatg 31342311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 32540755 - 32540810
Alignment:
Q  51 catagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||| || || ||||||||||||||| |||||||||||||    
T  32540755 catagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtg 32540810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 44706860 - 44706919
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||| | |||||||||||| ||||||||| ||||||| |||||||||||||||    
T  44706860 cacaagcattgcggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 44706919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 47303432 - 47303506
Alignment:
Q  81 ccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||| || |||| |||||||||||  |||||||||| |||||||||||||||||||  |||||||||    
T  47303432 ccaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtcac 47303506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 45415734 - 45415680
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  45415734 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatacctatgcttc 45415680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 29371513 - 29371444
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||| ||||||||||| | |||||||||| ||| | || |||||||||||| |||||||||||||    
T  29371513 tagcacttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtg 29371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 28928850 - 28928806
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  28928850 tctctctttcacaagcactgtgacattgtgattggccaatgtcac 28928806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 48605057 - 48604974
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| |||||||| | |||| ||||||||||| ||||||||||  |||||||  ||||||||||||||||||  |||||||||    
T  48605057 tgacattggccaattataatgtcacaatgcttgcgtttctctctctttcacaaatattgtgacattgtgattgaccaatgtcac 48604974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 48823884 - 48823920
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||||||||||||||||||||||||||||||||    
T  48823884 gggtagcacttgggtgacatagagttgggtgacattg 48823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 2573233 - 2573182
Alignment:
Q  102 ttgtgtttctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||| ||||    
T  2573233 ttgtgtttctctttttcacaagcattgtgatattgtgattagtcaatatcac 2573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 33219716 - 33219649
Alignment:
Q  39 gcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||| |||||||||||| |||||||| ||||| ||  ||||||||||| || ||||||||||    
T  33219716 gcacttgggtaacatagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtg 33219649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 45728349 - 45728294
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatg 173  Q
    |||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||    
T  45728349 cacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctatg 45728294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 46334022 - 46334056
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtca 152  Q
    |||||||||||||||||||||||||||||||||||    
T  46334022 cacaagcattgtgacattgtgattggtcaatgtca 46334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 13144728 - 13144773
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||    
T  13144728 caaaatgcctacaaatattatgataaaatctaagtcactgaaatac 13144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 17127561 - 17127626
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||| |||| |||||||| |||||||||  ||||| || |||||||||||| |||||||||||||    
T  17127561 acttgtgtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtg 17127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 31317907 - 31317858
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||||||||||||||||||||||| |||| |||||| | |||||||    
T  31317907 tgcctacaaataatatgataaattctaaatcaccgaaatatccatgcttc 31317858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 44183475 - 44183438
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  44183475 cgggtagcacttgggtgacatagagttaggtgacattg 44183438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 46333944 - 46334008
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||| ||||||||         ||||||||||||| |||||||||||||    
T  46333944 cgggtagcacttgggtgacatagagttggatgacattg---------gccaatcacaatgtcacaatgcttgtg 46334008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 48498477 - 48498412
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| |||||||  ||| ||||||  ||||||||||||||||| ||||||||||||||| |||||    
T  48498477 cacaaacattgtggtattatgattgaccaatgtcacaaatgtcacccaactctatgtcacccaagt 48498412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 5984013 - 5983958
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  5984013 acaaaatgcctacaaataatatgataaaacataagtcaccgaaatacccatgcttc 5983958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 8211834 - 8211881
Alignment:
Q  197 cctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||||  |||||||| ||||||||| |||||||    
T  8211834 cctacaaataatatgataaaacctaagtcattgaaatacccatgcttc 8211881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 16989547 - 16989504
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaat 233  Q
    |||| ||||||||||||||||||||||  |||||||||||||||    
T  16989547 caaaatgcctacaaataatatgataaaacctaagtcactgaaat 16989504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 28928779 - 28928814
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28928779 ggtagcacttgggtgacatagagtttggtgacattg 28928814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 14872815 - 14872761
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  |||||||||  ||||||| |||||||    
T  14872815 caaaatgcctacaaataatatgataaaacctaagtcaccaaaatacccatgcttc 14872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 26514279 - 26514245
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacat 68  Q
    |||||||| ||||||||||||||||||||||||||    
T  26514279 gggtagcatttgggtgacatagagttgggtgacat 26514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 1819485 - 1819526
Alignment:
Q  31 gacgggtagcacttgggtgacatagagttgggtgacattgat 72  Q
    ||||| |||||||||  |||||||||||||||||||||||||    
T  1819485 gacggatagcacttgaatgacatagagttgggtgacattgat 1819526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 34062348 - 34062311
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattga 71  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  34062348 gggtagcatttgggtaacatagagttgggtgacattga 34062311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 34878194 - 34878235
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaa 231  Q
    |||| ||||||||||||||||||||||  |||||||||||||    
T  34878194 caaaatgcctacaaataatatgataaaacctaagtcactgaa 34878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 48498553 - 48498517
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattga 71  Q
    |||||||||||||||||||||||||| |||||||||||    
T  48498553 gggtagcacttgggtgacatagagtt-ggtgacattga 48498517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 48823945 - 48823912
Alignment:
Q  120 caagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||||||||||||||| |||||||||    
T  48823945 caagcattgtgacattgtgattggccaatgtcac 48823912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 51373773 - 51373818
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaata 234  Q
    ||||| |||||||||||||||||||||| | |||||||| ||||||    
T  51373773 acaaaatgcctacaaataatatgataaaatataagtcaccgaaata 51373818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 4413290 - 4413246
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaata 234  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||    
T  4413290 caaaatgcctacaaataatatgataaaacctaagtcaccgaaata 4413246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 15431590 - 15431626
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaata 234  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  15431590 ctacaaataatatgataaaatctatgtcactgaaata 15431626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 31342315 - 31342259
Alignment:
Q  128 gtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||| ||||||||    ||||| ||||||||||||||| ||||||    
T  31342315 gtgacattgtgattggccaatgtcatcggtgtcacccaactctatgtcacccaagtg 31342259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 36381580 - 36381640
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatg 92  Q
    ||||||| ||||||| ||||||||| || | ||| |||| ||||| |||||||||||||||    
T  36381580 acgggtaacacttggatgacatagaattcgatgatattggtgacattggccaatcacaatg 36381640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 36381644 - 36381596
Alignment:
Q  128 gtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    |||||||||||||||| ||||||||| ||| ||||| || |||||||||    
T  36381644 gtgacattgtgattggccaatgtcaccaatatcatcgaattctatgtca 36381596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 47303640 - 47303676
Alignment:
Q  97 aatgcttgtgtttctctctttcacaagcattgtgaca 133  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  47303640 aatgtttgtgtttctctctttcacaaacattgtgaca 47303676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 51265442 - 51265590
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  51265442 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatg 51265541  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||| ||||| |||||||||    
T  51265542 attggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 51265590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 23444408 - 23444262
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgat 140  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  23444408 ttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 23444309  T
Q  141 tggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||| ||||||| |||||||||||| || ||| |||||    
T  23444308 tggtcaatgtcaccaatgtcacccaactctatgttacccaaatgcta 23444262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 6271699 - 6271847
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  6271699 acttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 6271798  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||| ||||||||| ||| |||  |||||||||||||| |||||||||    
T  6271799 attggccaatgtcaccaatatcactcaactctatgtcacccaagtgcta 6271847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 47661856 - 47661987
Alignment:
Q  58 ttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaa 155  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |    
T  47661856 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcacca 47661955  T
Q  156 atgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||| ||||||||||||||| ||| |||||    
T  47661956 atgtcacccaactctatgtcacccaaatgcta 47661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 26186160 - 26186043
Alignment:
Q  36 gtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagcattgtgacatt 135  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  26186160 gtagcacttgggtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtgtttctctctttcacaagcattgtgacatt 26186061  T
Q  136 gtgattggtcaatgtcac 153  Q
    |||||||  |||||||||    
T  26186060 gtgattgaccaatgtcac 26186043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 35682156 - 35682307
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtga 131  Q
    |||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||| || ||| ||||||||||||  |||||||||||||||||||    
T  35682156 gggtagcacttgggtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtga 35682255  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||| |||||||||||| ||||||| | |||||||||||||| ||||    
T  35682256 cattgtgatcggtcaatgtcaccaatgtcacctaactctatgtcacataagt 35682307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 42375016 - 42375155
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  42375016 acttgggtgacatagagttgggtgacattggt---------caatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 42375106  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||| |||||||||| ||||||| ||||||||||||||| |||||||||    
T  42375107 attgatcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 42375155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 53954638 - 53954755
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| ||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||    
T  53954638 tgacattggccaatcacaatgtcacaatgctagtgtttctcactctttcacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactc 53954737  T
Q  170 tatgtcacacaagtgcta 187  Q
    ||||||||| ||||||||    
T  53954738 tatgtcacaaaagtgcta 53954755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 44379919 - 44380065
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctc--tttcacaagcattgtg 130  Q
    |||||||||||||| ||||||||||||| |||||||||  |||| |||||||| | |||| ||||||||||| |||||||||  ||| | ||| |||||     
T  44379919 cgggtagcacttggatgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttgcgtttctctctattttataagtattgta 44380018  T
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||||||||||||||| |||| |||||||  ||||||||||||||    
T  44380019 acattgtgattggtcaatatcaccaatgtcactcaactctatgtcac 44380065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 30861915 - 30861823
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtga 131  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  30861915 acttgggtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtga 30861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 3862688 - 3862619
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgttt 109  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  3862688 cacttaggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3862619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 3871445 - 3871376
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgttt 109  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  3871445 cacttaggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 47404717 - 47404612
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| |         ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  47404717 acttgggtgacatagagttgggtgacattggt---------caatcacaatgccacaatgcttgggtttctctctctttcacaagcattgtgacattgtg 47404627  T
Q  139 attggtcaatgtcac 153  Q
    ||||  |||||||||    
T  47404626 attgaccaatgtcac 47404612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 52028545 - 52028660
Alignment:
Q  31 gacgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattg 128  Q
    |||| ||| |||||||||||||||||||||||||| ||||         ||||||||| ||| ||||||| |||||||||||  ||||||||||||||||    
T  52028545 gacgagtaacacttgggtgacatagagttgggtgatattg---------gccaatcacgatgtcacaatgtttgtgtttctctctctttcacaagcattg 52028635  T
Q  129 tgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||||| |||||||||    
T  52028636 tgacattgtgattggccaatgtcac 52028660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 6271850 - 6271778
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||| |||||||||||||    
T  6271850 gggtagcacttgggtgacatagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtg 6271778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 40789207 - 40789290
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||| ||||    
T  40789207 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatatcac 40789290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 42375158 - 42375086
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||    
T  42375158 gggtagcacttgggtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtg 42375086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 47661990 - 47661918
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  47661990 gggtagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 47661918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 51265593 - 51265442
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtga 131  Q
    |||||||||||||||||| |||||||||||||||||| ||||| || ||||||| |||| |||||||||||||             |||||||||||||     
T  51265593 gggtagcacttgggtgacttagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 51265494  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  51265493 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 51265442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 23444258 - 23444404
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtg 130  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||             |||||||||||||    
T  23444258 cgggtagcatttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 23444357  T
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
     |||||||||||| ||||||||| ||||||| |||||||||||||||    
T  23444358 gcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 23444404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 47762607 - 47762734
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgat 140  Q
    ||||||||||||||| || |||| |||  ||||| || ||||||||||||  |||||| || ||||||||  ||||||||||||||||||||||| || |    
T  47762607 ttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatgtttatgtttctctctctttcacaagcattgtgacattatggt 47762706  T
Q  141 tggtcaatgtcacaaatgtcatccaact 168  Q
    ||  ||||||||| ||| ||||||||||    
T  47762707 tgaccaatgtcaccaatatcatccaact 47762734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 55090106 - 55090023
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||| ||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||  |||||||||    
T  55090106 tgacattggtcaatcacaatgtcacaatgcttgtgtctctctctctttcacaagcattgtgacattgtgattgaccaatgtcac 55090023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 50384193 - 50384132
Alignment:
Q  94 cacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  50384193 cacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcac 50384132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 30861850 - 30861915
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||| |||||    
T  30861850 cacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaactctatgtcacccaagt 30861915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 31430590 - 31430488
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||||||||         |||||| ||||||||||   | ||||||||||||||  |||| ||||||||||||||||||    
T  31430590 acttgggtgacatagagttgggtgacattg---------gccaattacaatgccac---gtttgtgtttctctctctttcataagcattgtgacattgtg 31430503  T
Q  139 attggtcaatgtcac 153  Q
    |||||||||||||||    
T  31430502 attggtcaatgtcac 31430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 53954758 - 53954686
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||  |||||||||||||||||||||||| ||||| || ||||| |||||| |||||||||||||    
T  53954758 gggtagcacttttgtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtg 53954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 3862622 - 3862681
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||    
T  3862622 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 3862681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 3871379 - 3871438
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||    
T  3871379 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 3871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 30710048 - 30709990
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatg 92  Q
    |||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  30710048 gggtggcacttgggtgacatagagttaggtgacattggtgacattggccaatcacaatg 30709990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 6271764 - 6271699
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||||| |||||||||||| ||||||||| ||| ||| ||||||||||||||| |||||    
T  6271764 cacaagcattgtggcattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagt 6271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 26186090 - 26186159
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||| ||||||||||| ||||||||  ||||| | ||||||||||||||| |||||||||    
T  26186090 cacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctatgtcacccaagtgcta 26186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 33921242 - 33921193
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33921242 tgcctacaaataatatgataaaatctaagtcactgaaatacccatgcttc 33921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 5048942 - 5048884
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaa 98  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||||| |||| |||||    
T  5048942 cacttggatgacatagagttgggtgacattgatgacattggtcaatcataatgtcacaa 5048884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 31430459 - 31430497
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattga 71  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31430459 cgggtagcacttgggtgacatagagttgggtgacattga 31430497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 47404582 - 47404620
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47404582 acgggtagcacttgggtgacatagagttgggtgacattg 47404620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 30709986 - 30710043
Alignment:
Q  128 gtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgc 185  Q
    |||||||||||||||| ||||||||| ||||||| | ||||||||||||| |||||||    
T  30709986 gtgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtgc 30710043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 35682228 - 35682159
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||| ||| ||||||||||||||| ||||||||| ||| ||| | ||||||||||||| |||||||||    
T  35682228 cacaagtattatgacattgtgattggccaatgtcaccaatatcacctaactctatgtcacccaagtgcta 35682159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 50384103 - 50384140
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50384103 cgggtagcacttgggtgacatagagttgggtgacattg 50384140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 24006141 - 24006097
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||||||||||||| |||||||||||| |||||||||    
T  24006141 tctctctttcacaagcattgtgtcattgtgattggccaatgtcac 24006097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 56040561 - 56040617
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| ||||||||||||||||||||||  ||||||||| |||||||| ||||||||    
T  56040561 acaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttct 56040617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 25818461 - 25818387
Alignment:
Q  94 cacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaa 166  Q
    ||||||| ||||||||||||||  ||||||| |||||||||||||||||||  ||||||||  ||||||| ||||    
T  25818461 cacaatgattgtgtttctctctctttcacaatcattgtgacattgtgattgaccaatgtcatcaatgtcacccaa 25818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 28693994 - 28693951
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtca 152  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  28693994 tctctctttcacaaacattgtgatattgtgattggtcaatgtca 28693951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 35682301 - 35682242
Alignment:
Q  47 gtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||| |||||||||| ||||| || || ||||||||| |||||||||||||    
T  35682301 gtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtg 35682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 21662630 - 21662576
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||| |||||||||||||||||||  ||||||||| |||||||| |||||||    
T  21662630 caaagtgtctacaaataatatgataaaacctaagtcaccgaaatacccatgcttc 21662576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 21671394 - 21671340
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||| |||||||||||||||||||  ||||||||| |||||||| |||||||    
T  21671394 caaagtgtctacaaataatatgataaaacctaagtcaccgaaatacccatgcttc 21671340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 24006198 - 24006164
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattga 71  Q
    |||||||||||||||||||||||||||||||||||    
T  24006198 tagcacttgggtgacatagagttgggtgacattga 24006164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 24098983 - 24099029
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacc 236  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  24098983 caaaatgcctacaaataatatgataaaacctaagtcactgaaatacc 24099029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 37030446 - 37030408
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaatacc 236  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  37030446 ctacaaataatatgataatttctaagtcactgaaatacc 37030408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 45418706 - 45418660
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||    
T  45418706 acaaaatgcctacaaataatatgataaaatctaagtcaccgaaatac 45418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 47762664 - 47762611
Alignment:
Q  124 cattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||| ||||||||||||||||||||||||||| |||  || |||||||||||    
T  47762664 cattgtaacattgtgattggtcaatgtcacaaatatcactcagctctatgtcac 47762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 2325122 - 2325070
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatg 92  Q
    |||||| ||||||||||||| |||||||||||||||| || | ||||||||||    
T  2325122 cacttgagtgacatagagtttggtgacattgatgacattgacaaatcacaatg 2325070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 24006069 - 24006105
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||| |||||||||||||||    
T  24006069 gggtagcacttgggtgacatacagttgggtgacattg 24006105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 25617977 - 25618013
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgaca 76  Q
    |||||| ||||||||||||||||||||||||||||||    
T  25617977 cacttgtgtgacatagagttgggtgacattgatgaca 25618013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 25818387 - 25818435
Alignment:
Q  58 ttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  25818387 ttgggtgacattgatgacattggtcaatcacaatgtcacaatgattgtg 25818435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 34176286 - 34176246
Alignment:
Q  25 tacaacgacgggtagcacttgggtgacatagagttgggtga 65  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  34176286 tacaaagacgggtagcacttgagtgacatagagttgggtga 34176246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 47661904 - 47661856
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  47661904 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaa 47661856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 52060838 - 52060894
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| |||||||||| |||||||||||||| |||||| ||||||| | ||||||||    
T  52060838 acaaaatgcctacaaaaaatatgataaattcaaagtcattgaaatatccatgcttct 52060894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 29120294 - 29120349
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| |||||||||||||||||||||| ||||||| || |||||||  |||||||    
T  29120294 acaaaatgcctacaaataatatgataaaatctaagttaccgaaatactcatgcttc 29120349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 43510390 - 43510335
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  43510390 acaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 43510335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 44379990 - 44379923
Alignment:
Q  120 caagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||| | ||||| ||||||| | |||||||  |||||||||||||  |||||||||    
T  44379990 caagcattgtgacattataattggccaatgtcgccaatgtcactcaactctatgtcatccaagtgcta 44379923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 45591498 - 45591448
Alignment:
Q  94 cacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattg 142  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| ||||||    
T  45591498 cacaatgtttgtgtttctctctctttcacaagcattgtgacattatgattg 45591448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 2520972 - 2520918
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||| |||||| ||||| |||| |||||||| |||||||    
T  2520972 caaaatgcctacaaataatacgataaaatctaaatcaccgaaatacccatgcttc 2520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 17285807 - 17285841
Alignment:
Q  119 acaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| |||||||||||||||||||||||||||||    
T  17285807 acaagtattgtgacattgtgattggtcaatgtcac 17285841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 40789320 - 40789282
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  40789320 acgggtagcacttgggtgacatagagtttggtgatattg 40789282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 2325069 - 2325122
Alignment:
Q  131 acattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||||| ||||||||||  ||||||| | ||||||||||||| ||||||    
T  2325069 acattgtgatttgtcaatgtcatcaatgtcaccaaactctatgtcactcaagtg 2325122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 10496528 - 10496475
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||| ||||||||||||||||||||||  |||| |||| |||||||| ||||||    
T  10496528 caaaatgcctacaaataatatgataaaacctaactcaccgaaatacccatgctt 10496475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 19184496 - 19184549
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaa 90  Q
    ||||| |||||||| ||||||||  ||||||||||||||| ||| |||||||||    
T  19184496 tagcatttgggtgagatagagttaagtgacattgatgacattggtcaatcacaa 19184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 38714857 - 38714957
Alignment:
Q  78 tggccaatcacaatgccacaatgcttgtgtttctct--ctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtc 175  Q
    ||||||||||||||| || |||  || ||||||| |  ||||||||| ||||||||||||| ||||||  ||| |||| ||||||| ||| || ||||||    
T  38714857 tggccaatcacaatgtcataatatttatgtttctatttctttcacaaacattgtgacattgagattgggtaatatcaccaatgtcacccatctatatgtc 38714956  T
Q  176 a 176  Q
    |    
T  38714957 a 38714957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 44380069 - 44380020
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatg 92  Q
    |||||||||||||||||| ||||||||| ||| | || ||||||||||||    
T  44380069 ttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatg 44380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 52978929 - 52978884
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    ||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  52978929 ctacaaataatataataaaatctaagtcaccgaaatacccatgctt 52978884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 12199616 - 12199644
Alignment:
Q  197 cctacaaataatatgataaattctaagtc 225  Q
    |||||||||||||||||||||||||||||    
T  12199616 cctacaaataatatgataaattctaagtc 12199644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 54022045 - 54022009
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaata 234  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  54022045 ctacaaataatatgataaaatctaagtcaccgaaata 54022009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 16514421 - 16514569
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  16514421 acttgggtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtgtttctctctctttcacaagcattgtgacattgtg 16514520  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||| ||| ||||||||||||||| |||||||||    
T  16514521 attggtcaatgtcaccaatctcacccaactctatgtcacccaagtgcta 16514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 29508832 - 29508693
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgaca-ttgt 137  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| || ||||    
T  29508832 acttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcattgtggcatttgt 29508733  T
Q  138 gattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  29508732 gattggtcaatgtcaccaatgtcacccaactctatgtcac 29508693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 38933593 - 38933732
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||    
T  38933593 acttaggtgacatagagttgggtgacattga---------ccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatg 38933683  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||| ||| ||||| ||||||| ||||||||||||||| |||||||||    
T  38933684 attggccaacgtcaccaatgtcacccaactctatgtcacccaagtgcta 38933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 6217356 - 6217222
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||    
T  6217356 acttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtg 6217266  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaag 182  Q
    ||||| ||||||||| ||||||| ||||||||||||||| ||||    
T  6217265 attggccaatgtcaccaatgtcacccaactctatgtcacccaag 6217222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 14470694 - 14470584
Alignment:
Q  80 gccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  14470694 gccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 14470595  T
Q  178 acaagtgctat 188  Q
    |||||||||||    
T  14470594 acaagtgctat 14470584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 6721965 - 6722096
Alignment:
Q  58 ttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaa 155  Q
    |||| |||||||| ||||| || |||||||||||  |||||||||||||||||||  |||||||||| |||||||||||||||||||| |||| |||| |    
T  6721965 ttggatgacattggtgacattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggccaatatcacta 6722064  T
Q  156 atgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||| ||||||||||||||| |||||||||    
T  6722065 atgtcaaccaactctatgtcacccaagtgcta 6722096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 14229491 - 14229356
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtga 131  Q
    |||||||||||||||||||||||||||| ||||||||           ||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  14229491 gggtagcacttgggtgacatagagttggatgacattgg----------caatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtga 14229402  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||||||||  ||||||||| ||||||| | |||||||||||||    
T  14229401 cattgtgattgaccaatgtcaccaatgtcaccgaactctatgtcac 14229356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 15011294 - 15011391
Alignment:
Q  58 ttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||| ||| | ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  15011294 ttgggtgacattggtgatattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcac 15011391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 24115913 - 24116062
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacat 134  Q
    ||||||||| |||| ||||||||| || |||||| | ||| |||||||||||||||  ||||||| |||||||| |  |||||||||||||||| |||||    
T  24115913 tagcacttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcctgtgtttcacactctttcacaagcattgcgacat 24116012  T
Q  135 tgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||  |||| |||| |||| || ||||||||||||||||||||||    
T  24116013 tgtgattgaccaatatcactaatggcacccaactctatgtcacacaagtg 24116062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 37961712 - 37961848
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    ||||||||| |||||||||||||||||||||         || |||||||||||| |||| |||||||||||  |||||||||||||||||| |||||||    
T  37961712 acttgggtggcatagagttgggtgacattga---------ccgatcacaatgccataatgtttgtgtttctctctctttcacaagcattgtggcattgtg 37961802  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||    
T  37961803 attggtcaatgtcacaaatatcactcaactctatgtcacccaagtg 37961848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 6217222 - 6217286
Alignment:
Q  42 cttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  6217222 cttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 6217286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 2828582 - 2828695
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtg 130  Q
    ||||||||||||  ||||||||||||||||||||||||         ||||||||||||| || ||||||||||||||||  ||||||| ||||||||||    
T  2828582 cgggtagcacttctgtgacatagagttgggtgacattg---------gccaatcacaatgtcaaaatgcttgtgtttctctctctttcagaagcattgtg 2828672  T
Q  131 acattgtgattggtcaatgtcac 153  Q
    ||||||||||||| |||||||||    
T  2828673 acattgtgattggccaatgtcac 2828695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 38933737 - 38933663
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||| |||||||||||||    
T  38933737 acgggtagcacttgggtgacatagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtg 38933663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 29925680 - 29925580
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||  || ||||||||| ||| ||| |||||||    
T  29925680 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattctgacattgtgaggggccaatgtcaccaatatcacccaactc 29925581  T
Q  170 t 170  Q
    |    
T  29925580 t 29925580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 16514572 - 16514500
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||| |||||||||||||    
T  16514572 gggtagcacttgggtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtg 16514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 9173117 - 9173050
Alignment:
Q  46 ggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctct 113  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||||    
T  9173117 ggtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgtatttctct 9173050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 14892327 - 14892405
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||| ||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||    
T  14892327 tctctctttcataagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctatgtcacccaaatgcta 14892405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 32545782 - 32545934
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaat---gcttgtgtt-tctctctttcacaagcattgtgacatt 135  Q
    ||||| |||||||||||||| |||||||||| ||||| ||| ||| ||| ||| |||||    | || | || ||||||||||| |||||||||||||||    
T  32545782 cacttaggtgacatagagttaggtgacattggtgacattggtcaaccacgatgtcacaagtaagttttttttatctctctttcataagcattgtgacatt 32545881  T
Q  136 gtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
     ||||||| ||||||||| |||||||   ||||||||||||| ||||||||||    
T  32545882 atgattggccaatgtcaccaatgtcactaaactctatgtcacccaagtgctat 32545934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 37762101 - 37762028
Alignment:
Q  82 caatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||  ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  37762101 caatcacaatatcacaatgcttgtgtttctttctctttcacaagcattgcgacattgtgattggtcaatgtcac 37762028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 2893962 - 2894073
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtga 131  Q
    ||||| |||||||||||||||||||||||||||||||         ||||||||||||  |||||||||||| ||||||  |||||||||||||||||||    
T  2893962 gggtaacacttgggtgacatagagttgggtgacattg---------gccaatcacaatctcacaatgcttgtatttctctctctttcacaagcattgtga 2894052  T
Q  132 cattgtgattggtcaatgtca 152  Q
    || ||||||||  ||||||||    
T  2894053 cactgtgattgaccaatgtca 2894073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 29508680 - 29508753
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcac-aatgccacaatgcttgtg 106  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  29508680 gggtaacacttaggtgacatagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtg 29508753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 6722099 - 6722027
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||||||| |||||||  ||| | ||||||||||||||| ||||||| |||||    
T  6722099 gggtagcacttgggtgacatagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtg 6722027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 37961854 - 37961782
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||| ||||||||||||||||||||| |||| |||  ||||| || ||||||||||||||||||||||||||    
T  37961854 gggtaacacttgggtgacatagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtg 37961782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 32545938 - 32545867
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgctt 103  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||| |||||||||| |||| ||||||||||    
T  32545938 acggatagcacttgggtgacatagagtttagtgacattggtgacattggccaatcataatgtcacaatgctt 32545867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 14470585 - 14470654
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||| |||||||||||||||||||||||| ||||| || ||||||||||||   |||||||||||    
T  14470585 tagcacttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtg 14470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 6722013 - 6721965
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaa 166  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  6722013 cacaagcattgtgatattgtgattggtcaatgtcaccaatgtcatccaa 6721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 14229355 - 14229415
Alignment:
Q  46 ggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||| |||||||||| ||||| ||| ||||||||||| |||||||||||||    
T  14229355 ggtgacatagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtg 14229415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 33018620 - 33018679
Alignment:
Q  117 tcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    ||||||||||||||||||||||||||  |||| |||| ||||||| ||||||||||||||    
T  33018620 tcacaagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtca 33018679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 9173058 - 9173116
Alignment:
Q  119 acaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||||||||| |||||||||||| |||| |||| ||||||| |||||||||||||||    
T  9173058 acaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatgtcac 9173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 33018679 - 33018621
Alignment:
Q  48 tgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||| ||| | ||| ||||||||||| |||||||||||||    
T  33018679 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtg 33018621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 39310775 - 39310821
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgc 241  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  39310775 tgcctacaaataatatgataaaatctaagtcactgaaatacccatgc 39310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 45213892 - 45213942
Alignment:
Q  134 ttgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  45213892 ttgtgattggtcaatgtcatcaatgtcacccaactctatgtcacacaagtg 45213942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 45213942 - 45213892
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaa 90  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  45213942 cacttgtgtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 16514486 - 16514421
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||| || ||| |||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  16514486 cacaagcattatggcatagtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 16514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 29508767 - 29508832
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||||||||| | |||||||||||| ||||||||| ||| ||| ||||||||||||||| |||||    
T  29508767 cacaagcattgcggcattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagt 29508832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 33760110 - 33760155
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  33760110 caaaatgcctacaaataatatgataagttctaagtcactgaaatac 33760155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 14892409 - 14892350
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatg 92  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||| ||  |||||||||||    
T  14892409 cgggtagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatg 14892350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 17994647 - 17994697
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatg 240  Q
    |||| |||||||||||||||||||||| | |||||||| ||||||||||||    
T  17994647 caaaatgcctacaaataatatgataaaatttaagtcaccgaaatacctatg 17994697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 24115982 - 24115912
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||| ||||||| ||||||||||||| |||||| || ||||| |  ||||||||| |||||||||||||||    
T  24115982 cacaggcattgtaacattgtgattggccaatgttaccaatgtgactcaactctatctcacacaagtgctat 24115912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 31128697 - 31128751
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||  |||||||    
T  31128697 caaaatgcctacaaataatatgataaaatataagtcactgaaatactcatgcttc 31128751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 11985150 - 11985195
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||    
T  11985150 caaaatgcctacaaataatatgataaaacctaagtcactgaaatac 11985195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 37876523 - 37876576
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||| |||||||||||||||||||||| | |||||||| |||||||| ||||||    
T  37876523 caaaatgcctacaaataatatgataaaatttaagtcaccgaaatacccatgctt 37876576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 4904061 - 4904117
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| || ||||||||||||||||||| |||||||||| |||||| | ||||||||    
T  4904061 acaaaatgtctacaaataatatgataaaatctaagtcaccgaaatatccatgcttct 4904117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 8534158 - 8534286
Alignment:
Q  56 agttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||||||||||||||| ||  |||| ||||||  | |||  ||||||||||||||  |||||||| ||||||||||||| ||||  |||| |||     
T  8534158 agttgagtgacattgatgacattgatcaattacaatgtaaaaatatttgtgtttctctctatttcacaagaattgtgacattgtaattgaccaatatca- 8534256  T
Q  154 aaatgtcatccaactctatgtcacacaagtgctat 188  Q
         |||||||||||||| |||| ||||||||||    
T  8534257 -----tcatccaactctatatcacccaagtgctat 8534286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 18107666 - 18107722
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| ||||||||||||||||||| ||||||||||||  |||||||  ||||||||    
T  18107666 acaaaatgcctacaaataatatgattaattctaagtcatcgaaatacacatgcttct 18107722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 1421860 - 1421805
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||  |||| |||| |||||||| |||||||    
T  1421860 acaaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgcttc 1421805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 4264656 - 4264601
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||||  ||||||  |||||||| |||||||    
T  4264656 acaaaatgcctacaaataatatgataaatttgaagtcatcgaaatacccatgcttc 4264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 12554097 - 12554152
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||  |||||| ||||||||||  |||||||    
T  12554097 acaaaatgcctacaaataatatgataaaacctaagttactgaaatactcatgcttc 12554152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 38933649 - 38933614
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||||| ||||||||||||||||||||||    
T  38933649 cacaagcattgtggcattgtgattggtcaatgtcac 38933614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 4778936 - 4778882
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  4778936 caaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 4778882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 9172978 - 9173016
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  9172978 acgggtaatacttgggtgacatagagttgggtgacattg 9173016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 24116062 - 24115996
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||| |||||||||||||||||| ||||  ||| | ||| ||||||||||| | |||||||||||    
T  24116062 cacttgtgtgacatagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtg 24115996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 30399946 - 30399984
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcact 228  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  30399946 caaaatgcctacaaataatatgataaaatctaagtcact 30399984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 35204217 - 35204143
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||| ||  | ||||||||||||| ||| |||| | |||| || ||| ||||||    
T  35204217 acgggtagcacttgggtgacatagaattttgagacattgatgacattggtcaattataatgtcagaatccttgtg 35204143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 39819054 - 39819116
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccaca 97  Q
    ||||||||||||||||||| | | | |||||||||| ||||| ||||||| ||||||| ||||    
T  39819054 ggtagcacttgggtgacattgtggttggtgacattggtgacattggccaaccacaatgtcaca 39819116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 13014840 - 13014885
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||| |||||||| ||||| ||||||||||||||| ||||||||||    
T  13014840 caaaatgcctacatataatgtgataaattctaagtgactgaaatac 13014885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31210524 - 31210577
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||| ||||||||||||||||||||||  |||| |||| |||||||| ||||||    
T  31210524 caaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgctt 31210577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31788639 - 31788594
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||| ||||||||||||||||| ||||  |||||||||||||||||    
T  31788639 caaaatgcctacaaataatatgttaaaacctaagtcactgaaatac 31788594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 14229456 - 14229488
Alignment:
Q  155 aatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||||||||||| |||||||||    
T  14229456 aatgtcatccaactctatgtcacccaagtgcta 14229488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 14464622 - 14464582
Alignment:
Q  113 tctttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||||||||| ||||||||||||||||||  |||||||||    
T  14464622 tctttcacaagtattgtgacattgtgattgaccaatgtcac 14464582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 29173650 - 29173690
Alignment:
Q  203 aataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||||||||||||| |||||||||| |||||||| ||||||    
T  29173650 aataatatgataaaatctaagtcaccgaaatacccatgctt 29173690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 19655155 - 19655300
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  19655155 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtg 19655254  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||| ||||||||| |||||||  |||||||||||||| ||||||    
T  19655255 attggacaatgtcaccaatgtcactcaactctatgtcacccaagtg 19655300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 291094 - 291242
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttc--tctctttcacaagcattgtgacattgtg 138  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||    
T  291094 acttgagtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtatttctttctctttcacaaacattgtgacattgtg 291193  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||| |||||||||| ||||||| |||||||||| |||| |||||||||    
T  291194 attgatcaatgtcaccaatgtcacccaactctatatcacccaagtgcta 291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 29699381 - 29699512
Alignment:
Q  58 ttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaa 155  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |    
T  29699381 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcacca 29699480  T
Q  156 atgtcatccaactctatgtcacacaagtgcta 187  Q
    || ||| ||||||||||||||| |||||||||    
T  29699481 atatcacccaactctatgtcacccaagtgcta 29699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 16971172 - 16971289
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  16971172 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 16971271  T
Q  170 tatgtcacacaagtgcta 187  Q
    |||||||| |||||||||    
T  16971272 tatgtcacccaagtgcta 16971289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 3899845 - 3899984
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  3899845 acttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 3899935  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||| ||||||| ||||||||| ||||| |||||||||    
T  3899936 attggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 3899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 12913793 - 12913942
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtga 131  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||| ||||||||||||||| |||||| ||||||  | ||||||||||||||||||| |||    
T  12913793 gggtagcacttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtgtatctctctctttcacaagcattatga 12913892  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaa 181  Q
    |||||||||||  |||| |||| ||||||| |||||||||||||||||||    
T  12913893 cattgtgattgaccaatatcaccaatgtcacccaactctatgtcacacaa 12913942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 30117967 - 30117821
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctc--tttcacaagcattgtgacattgtgat 140  Q
    |||| |||||||||||||| |||||||| ||| | ||| |||||| ||||||||||||||||||||||||||  ||||| || |||||||||||||||||    
T  30117967 ttggatgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtgtttctctctttttcataaacattgtgacattgtgat 30117868  T
Q  141 tggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||| |||| ||||||| |||||||||| |||| ||| |||||    
T  30117867 tggtcaatatcaccaatgtcacccaactctatatcacccaaatgcta 30117821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 16439131 - 16439249
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacat 134  Q
    |||||||||| ||| |||||||||||| | |||| ||||| ||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  16439131 tagcacttggatgatatagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacat 16439230  T
Q  135 tgtgattggtcaatgtcac 153  Q
    |||||||| ||||||||||    
T  16439231 tgtgattgatcaatgtcac 16439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 2356327 - 2356416
Alignment:
Q  97 aatgcttgtgtttctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  2356327 aatgcttgtgtttctctctttcataagcattgtgacat-gtgattggccaatgtcaccaatgtcatccaactctatgtcacacaagtgcta 2356416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 2953240 - 2953335
Alignment:
Q  94 cacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||    
T  2953240 cacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 2953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 19598329 - 19598442
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||| |||||| ||||| ||| |||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||| ||    
T  19598329 acttgggtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtgtttctctctctttcacaagcatt-tgacattatg 19598427  T
Q  139 attggtcaatgtcac 153  Q
    |||||| ||||||||    
T  19598428 attggttaatgtcac 19598442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 3180204 - 3180062
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacat 134  Q
    ||||||||| || |||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  3180204 tagcacttgtgtcacatagagttgg-taacattggtgacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacat 3180106  T
Q  135 tgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    | |||||| ||||||||||         |||||||||||||||||||||||||    
T  3180105 tatgattgatcaatgtcac---------ccaactctatgtcacacaagtgcta 3180062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 2953338 - 2953266
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  2953338 gggtagcacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 2953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 26662398 - 26662542
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctc--tttcacaagcattgtga 131  Q
    |||||||||||| |||||||||||||||||||||||||         ||||||||||||  ||| ||||||||||||||||  ||||||||| |||||||    
T  26662398 gggtagcacttgtgtgacatagagttgggtgacattga---------ccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtga 26662488  T
Q  132 cattgtga-ttggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||| |||  ||||||||| ||| ||| ||||||||| ||||||||||||    
T  26662489 cattgtgatttgaccaatgtcaccaatatcacccaactctaagtcacacaagtg 26662542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 26933993 - 26934137
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctc--tttcacaagcattgtga 131  Q
    |||||||||||| |||||||||||||||||||||||||         ||||||||||||  ||| ||||||||||||||||  ||||||||| |||||||    
T  26933993 gggtagcacttgtgtgacatagagttgggtgacattga---------ccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtga 26934083  T
Q  132 cattgtga-ttggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||| |||  ||||||||| ||| ||| ||||||||| ||||||||||||    
T  26934084 cattgtgatttgaccaatgtcaccaatatcacccaactctaagtcacacaagtg 26934137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 28818916 - 28819052
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtga 131  Q
    ||||||||||||||||||||||||||||||||||||| |         ||||||||||| |||||| ||||| ||||||  |||||||||||||||||||    
T  28818916 gggtagcacttgggtgacatagagttgggtgacattggt---------caatcacaatgtcacaatacttgtatttctctctctttcacaagcattgtga 28819006  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||| ||||||  ||||||||| ||| |||  ||||||||||||||    
T  28819007 cattatgattgaccaatgtcaccaatatcactcaactctatgtcac 28819052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 2094022 - 2093930
Alignment:
Q  97 aatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||| |||||||||| ||| ||| ||||||||||||||| |||||||||    
T  2094022 aatgcttgtgtttctctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctatgtcacccaagtgcta 2093930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 16971293 - 16971220
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  16971293 cgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 16971220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 29699513 - 29699443
Alignment:
Q  36 gtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||    
T  29699513 gtagcacttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtg 29699443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 3899986 - 3899915
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  3899986 ggtagcacttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 38134477 - 38134405
Alignment:
Q  78 tggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattggtcaat 148  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||    
T  38134477 tggccaatcacaatgtcacaatgcttgtgtttctttctctttcactagcattgtgacattgtgattggccaat 38134405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 19655300 - 19655234
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||| ||||||||| ||||| || |||||||||||| |||||||||||||    
T  19655300 cacttgggtgacatagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtg 19655234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 12913865 - 12913796
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||  ||||| ||||||||||||||||||    
T  12913865 cacaagaattgtgacattgtgattggccaatgtcaccaatgtcactcaactatatgtcacacaagtgcta 12913796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 291158 - 291094
Alignment:
Q  119 acaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  291158 acaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcactcaagt 291094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 291245 - 291173
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||  ||||||||||| ||||||| |||||    
T  291245 gggtagcacttgggtgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtg 291173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 2093927 - 2093999
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||||||||||| |||| ||||| ||  ||||||||||| || ||||||||||    
T  2093927 gggtagcacttgggtgacatagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtg 2093999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 16802472 - 16802555
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| |||||||||||||||  |||||  ||||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  16802472 tgacattggccaatcacaatgtaacaatatttgtgtttctctctcttttacaagcattgtgacattctgattggtcaatgtcac 16802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 2356421 - 2356351
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgctt 103  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||| ||| ||||||||||    
T  2356421 acgggtagcacttgtgtgacatagagttggatgacattggtgacattggccaatcac-atgtcacaatgctt 2356351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 13312254 - 13312321
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgc 101  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||  ||||||||||| ||||||||    
T  13312254 gggtagcacttaggtgacatagagttaggtgacattgatgacattgatcaatcacaatgtcacaatgc 13312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 19655220 - 19655155
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| ||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  19655220 cacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 19655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 30117815 - 30117884
Alignment:
Q  31 gacgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatg 100  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||| | || |||||||||||| |||||||    
T  30117815 gacgggtagcatttgggtgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatg 30117884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 32485630 - 32485691
Alignment:
Q  123 gcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||||||| |||||||||| |||||||||| ||||||| |||||||| |||||||||||||    
T  32485630 gcattgtgatattgtgattgatcaatgtcaccaatgtcacccaactctgtgtcacacaagtg 32485691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 14167225 - 14167146
Alignment:
Q  107 tttctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||| |||| ||| ||||| |||| |||||||||    
T  14167225 tttctctctttcacaaggattgtgacattgtgattcgtcaaagtcaccaatatcat-caattctatatcacccaagtgcta 14167146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 26878023 - 26878079
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||    
T  26878023 acaaagtgcctacaaataatatgataaaatctaagtcaccaaaatacccatgcttct 26878079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 1638519 - 1638449
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||| |||||||||||||||||||| |||| |||||||| ||| |||||||||| ||||  |||||||||    
T  1638519 cacaaacattgtgacattgtgattggccaatatcacaaatatcacccaactctatatcacctaagtgctat 1638449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 3180136 - 3180205
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||||||||||| |||||||||||  ||||||||| ||||| | |||||||||||| |||||||||||||    
T  3180136 cacaagcattgtggcattgtgattgaccaatgtcaccaatgtta-ccaactctatgtgacacaagtgctat 3180205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 38597969 - 38597915
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  38597969 caaaatgcctacaaataatatgataaaacctaagtcactgaaatacccatgcttc 38597915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 10722928 - 10722880
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  10722928 tgcctacaaataatatgataaaatctaagtcaccgaaatacccatgctt 10722880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 13312321 - 13312257
Alignment:
Q  123 gcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||| |||||||||  ||||||| | |||||||||||||  ||||||||    
T  13312321 gcattgtgacattgtgattgatcaatgtcatcaatgtcacctaactctatgtcacctaagtgcta 13312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 1638450 - 1638521
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt 108  Q
    |||||||| ||||| |||||||||||||| |||  ||| | ||||||||||||||| ||||||| |||||||    
T  1638450 tagcacttaggtgatatagagttgggtgatatttgtgatattggccaatcacaatgtcacaatgtttgtgtt 1638521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 12913938 - 12913879
Alignment:
Q  47 gtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||| ||| | ||| ||||||||||| || ||||||||||    
T  12913938 gtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtg 12913879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 14082311 - 14082366
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||  |||||||| ||||||||| |||||||    
T  14082311 acaaaatgcctacaaataatatgataaaacctaagtcattgaaatacccatgcttc 14082366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 28819056 - 28818993
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||| |||| |||| ||||| ||| |||||| |||| |||||||||||||    
T  28819056 ttgggtgacatagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtg 28818993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 3180059 - 3180097
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgat 72  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3180059 gggtagcacttgtgtgacatagagttgggtgacattgat 3180097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 16439200 - 16439130
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||||||||||||||||||||||||  ||||||||| ||| | | |||||||||| |||  ||||||||||    
T  16439200 cacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctatatcatccaagtgctat 16439130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 22082988 - 22083045
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaat 91  Q
    ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||    
T  22082988 cgggtagca-ttgggtgacatagagttgtgtgacattaatgacattgaccaatcacaat 22083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 30117904 - 30117962
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    ||||||||||||| |||| ||||||  |||| |||| ||||||||||||||||||||||    
T  30117904 cacaagcattgtggcattatgattgaccaatatcaccaatgtcatccaactctatgtca 30117962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 37325631 - 37325589
Alignment:
Q  107 tttctctctttcacaagcattgtgacattgtgattggtcaatg 149  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  37325631 tttctctctttcacaaggattgtgacattgtgattcgtcaatg 37325589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 37986028 - 37986078
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctat 239  Q
    ||||| || ||||||||||| ||||||||||||||||||| ||||||||||    
T  37986028 acaaaatgtctacaaataatgtgataaattctaagtcactaaaatacctat 37986078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 19598394 - 19598329
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||||  ||||||||||  ||||||||| ||||| | ||||||||||||||| |||||    
T  19598394 cacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcacccaagt 19598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 29385454 - 29385390
Alignment:
Q  33 cgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccaca 97  Q
    ||||||||||||||||||||| | | | |||||||||| ||||| ||||||| ||||||| ||||    
T  29385454 cgggtagcacttgggtgacattgtggttggtgacattggtgacattggccaaccacaatgtcaca 29385390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 29699429 - 29699381
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||| ||||    
T  29699429 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaa 29699381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 41630675 - 41630619
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| || ||||||||||||||||||| |||||||||| |||||||  ||||||||    
T  41630675 acaaaatgtctacaaataatatgataaaatctaagtcacggaaatacacatgcttct 41630619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 7009401 - 7009452
Alignment:
Q  115 tttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaa 166  Q
    ||||||||||||||||| ||||||||||  |||| |||| ||||||||||||    
T  7009401 tttcacaagcattgtgatattgtgattgaccaatatcaccaatgtcatccaa 7009452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 19272341 - 19272270
Alignment:
Q  105 tgtttctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    ||||||||||||||||||  ||| ||  |||||||||||||||| |||| ||| |||  |||||||||||||    
T  19272341 tgtttctctctttcacaaatattatgtaattgtgattggtcaatttcaccaatatcactcaactctatgtca 19272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 19598470 - 19598435
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacatt 69  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19598470 gggtaacacttgggtgacatagagttgggtgacatt 19598435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 39031290 - 39031200
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtga 131  Q
    |||| ||||||||||| ||||||||||| ||||| ||  ||||||||||  || |||  |||| ||||||  |||||||||||||||||||    
T  39031290 ttggatgacatagagtggggtgacattggtgacactgatcaatcacaatatcataatatttgtatttctctttctttcacaagcattgtga 39031200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 1839962 - 1840024
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccaca 97  Q
    ||||||| ||||||||||| | | | |||||||||||||||| ||||||| ||||||| ||||    
T  1839962 ggtagcaattgggtgacattgtggttggtgacattgatgacattggccaaccacaatgtcaca 1840024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 2935977 - 2935869
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtga 131  Q
    |||||||||||  || ||||| |||| |||||||||| ||| | ||  ||| ||||||| ||||||| |||||||||||  ||||| |||| |||| |||    
T  2935977 gggtagcacttacgtaacataaagtttggtgacattg-tgatattgaacaaccacaatgtcacaatgtttgtgtttctctatcttttacaaacattatga 2935879  T
Q  132 cattgtgatt 141  Q
    ||||||||||    
T  2935878 cattgtgatt 2935869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 13007401 - 13007347
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  13007401 caaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 13007347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 2953204 - 2953233
Alignment:
Q  41 acttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||||||||||    
T  2953204 acttgggtgacatagagttgggtgacattg 2953233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 6012059 - 6012108
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||| ||   ||||||||||||||||| |||||||    
T  6012059 tgcctacaaataatatgatcaaacttaagtcactgaaatacccatgcttc 6012108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 6217065 - 6217016
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||||||||||||||||| | |||||||| |||||||  |||||||    
T  6217065 tgcctacaaataatatgataaaatttaagtcaccgaaatacacatgcttc 6217016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 9113646 - 9113695
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||||||   |||||||| |||||| |||||||||    
T  9113646 tgcctacaaataatatgataaaacttaagtcaccgaaatatctatgcttc 9113695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 26662461 - 26662401
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||| ||| |||||||||||||||||||||||         |||||||||||||||||||||||||    
T  26662461 cacaagcaatgtaacattgtgattggtcaatgtcac---------ccaactctatgtcacacaagtgcta 26662401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 26934056 - 26933996
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||| ||| |||||||||||||||||||||||         |||||||||||||||||||||||||    
T  26934056 cacaagcaatgtaacattgtgattggtcaatgtcac---------ccaactctatgtcacacaagtgcta 26933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 31147140 - 31147193
Alignment:
Q  47 gtgacatagagttgggtgacattgatgacaatggccaatcac-aatgccacaat 99  Q
    |||||||||||||| ||||||||||| | | ||||||||||| |||||||||||    
T  31147140 gtgacatagagttgagtgacattgataatattggccaatcacaaatgccacaat 31147193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 32485691 - 32485630
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgc 101  Q
    |||||| |||||| ||||||||||||||||| ||||| ||  ||||||||||  ||||||||    
T  32485691 cacttgtgtgacacagagttgggtgacattggtgacattgatcaatcacaatatcacaatgc 32485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 39777050 - 39777083
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgaca 76  Q
    |||||||||||||||||||||||||||| |||||    
T  39777050 ttgggtgacatagagttgggtgacattggtgaca 39777083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 11983247 - 11983310
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaat 99  Q
    |||||||||||||||||||||| || ||||| |||| ||||| ||| |||||| |||| ||||||    
T  11983247 ggtagcacttgggtgacatagaatt-ggtgatattggtgacattggtcaatcaaaatgtcacaat 11983310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 22083045 - 22083001
Alignment:
Q  133 attgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||||||||||||  |||||||  ||||||||||||||    
T  22083045 attgtgattggtcaatgtcattaatgtcacacaactctatgtcac 22083001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 24229700 - 24229744
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaata 234  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||    
T  24229700 caaaatgcctacaaataatatgataaaacctaagtcacagaaata 24229744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 41752961 - 41753106
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttc--tctctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||    
T  41752961 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctttctctttcacaagcattgtggcattgtg 41753060  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||||| ||||||||| |||||||  |||||||||||||| ||||||    
T  41753061 attggccaatgtcaccaatgtcactcaactctatgtcacccaagtg 41753106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 30734550 - 30734394
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtga 131  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| || ||| ||||||||||||  |||||||||||||||||||    
T  30734550 gggtagcacttgggtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtga 30734451  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||||||| |||||||||||  ||||||| | ||||||||||||||||||| ||||    
T  30734450 cattgtgatcggtcaatgtcatcaatgtcaccaaactctatgtcacacaagttctat 30734394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 176
Target Start/End: Complemental strand, 51046214 - 51046077
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||| ||    
T  51046214 acttgggtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtgtttctctctctttcacaaacattgtgacattatg 51046115  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    |||| |||||||||| ||| ||||||||||||||||||    
T  51046114 attgatcaatgtcaccaatatcatccaactctatgtca 51046077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 47492186 - 47492061
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctc--tttcacaagcattgtgacattgtgat 140  Q
    |||||||||||||||||||||||||||| | | | ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  47492186 ttgggtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtgtttctctctttttcacaagcattgtgacattgtgat 47492087  T
Q  141 tggtcaatgtcacaaatgtcatccaa 166  Q
    ||| ||||||||| ||||||| ||||    
T  47492086 tggccaatgtcaccaatgtcacccaa 47492061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 33689172 - 33689287
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgt 137  Q
    |||||| |||||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  33689172 cacttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 33689271  T
Q  138 gattggtcaatgtcac 153  Q
    |||||| |||||||||    
T  33689272 gattggccaatgtcac 33689287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 1801556 - 1801442
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||    
T  1801556 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 1801457  T
Q  170 tatgtcacacaagtg 184  Q
    |||||||| ||||||    
T  1801456 tatgtcacccaagtg 1801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 43139848 - 43139747
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgat 140  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  43139848 ttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtgtttctctctctttcacaagcattctgacattgtgat 43139749  T
Q  141 tg 142  Q
    ||    
T  43139748 tg 43139747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 30580890 - 30580752
Alignment:
Q  48 tgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattggtc 145  Q
    ||||||||| ||||||||||||  ||||| ||| ||||||||||| |||| |||||||||||||  |||||||||||  ||||||||||| |||||||||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtgtttctatctctttcacaaatattgtgacattatgattggtc 30580791  T
Q  146 aatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    ||| |||| ||||||| |||| |||||||||| ||||||    
T  30580790 aatatcaccaatgtcacccaattctatgtcactcaagtg 30580752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 1801436 - 1801508
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1801436 gggtaacacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 1801508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 47677391 - 47677282
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacat 134  Q
    ||||||||| ||||||||||||||||||||||||||         ||||||||||| ||||||| ||||||||||||||  |||||||||||||||||||    
T  47677391 tagcacttgtgtgacatagagttgggtgacattgat---------caatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacat 47677301  T
Q  135 tgtgattggtcaatgtcac 153  Q
    |||||| ||||||||||||    
T  47677300 tgtgatcggtcaatgtcac 47677282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 41753114 - 41753040
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  41753114 acgggtaacacttgggtgacatagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtg 41753040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 45103180 - 45103102
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||||| |||||||||    
T  45103180 tctctctttcacaagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctatgtcacccaagtgcta 45103102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 50524692 - 50524844
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtga 131  Q
    ||||| |||| || ||||||||||||| |||| | |||||||| || ||||||| |||| ||||||| |||||||  |||||||||||||||||| || |    
T  50524692 gggtaacactgggatgacatagagttgagtgataatgatgacattgaccaatcataatgtcacaatgtttgtgtttctctctctttcacaagcatcgtaa 50524791  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||   ||| |||| |||||||  |||||||||||||| ||||||    
T  50524792 cattgtgattgactaatatcaccaatgtcactcaactctatgtcacccaagtg 50524844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 30476584 - 30476501
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  30476584 tgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcac 30476501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 18321644 - 18321761
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg--tttctctctttcacaagcattgtgacat 134  Q
    |||||||||||  |||||||||||||||| |||| ||||| ||| ||||||||||| ||||| | |||||  ||||||| ||||||| ||||||||||||    
T  18321644 tagcacttgggcaacatagagttgggtgatattggtgacattggtcaatcacaatgtcacaaagtttgtgtttttctctttttcacatgcattgtgacat 18321743  T
Q  135 tgtgattggtcaatgtca 152  Q
    ||||||||  ||||||||    
T  18321744 tgtgattgaccaatgtca 18321761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 45103099 - 45103171
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||  ||||||||||| |||||||||||||    
T  45103099 gggtagcacttgggtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtg 45103171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 51046149 - 51046214
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||| || |||||||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  51046149 cacaagcattatggcattgtgattggccaatgtcaccaatgtcatccaactctatgtcacccaagt 51046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 55223225 - 55223332
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacat 134  Q
    ||||||||| ||||||||||||| |||||||||| ||| | ||| ||||||||||   | ||| ||| ||||  ||||||||||||||||||||||||||    
T  55223225 tagcacttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaatattagaatacttatgtttctctctctttcacaagcattgtgacat 55223324  T
Q  135 tgtgattg 142  Q
    | ||||||    
T  55223325 tatgattg 55223332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 50549972 - 50550086
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtt--tctctctttcacaagcattgtgacattgtg 138  Q
    ||||| |||| ||| || ||||||| |||| ||||| || |||||||||||   ||||||||||||||  |||||||||||||| |||| ||||||| ||    
T  50549972 acttgagtgatataaagctgggtgatattggtgacattgaccaatcacaatattacaatgcttgtgtttctctctctttcacaaacattatgacattatg 50550071  T
Q  139 attggtcaatgtcac 153  Q
    |||| ||||||||||    
T  50550072 attgatcaatgtcac 50550086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 33689238 - 33689172
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||||||||||||  |||| |||  ||||||| ||||||||||||||||||||||    
T  33689238 cacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactctatgtcacacaagtg 33689172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 30734399 - 30734464
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||| ||||||||||||| |||||||||||||||| || || ||||||||| |||||||||||||    
T  30734399 acttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtg 30734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 30734478 - 30734547
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||| ||| ||||||||||||||| ||||||||| ||||||| | ||||||||||||| |||||||||    
T  30734478 cacaagtattatgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtgcta 30734547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 41753026 - 41752961
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| ||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  41753026 cacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 41752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 29031814 - 29031752
Alignment:
Q  82 caatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattg 142  Q
    |||| |||||| ||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  29031814 caattacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 29031752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 43139785 - 43139844
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||||| |||||| ||||| ||||||||| ||||||| |||||||||||||||    
T  43139785 cacaagcattgtggcattgttattggccaatgtcaccaatgtcacccaactctatgtcac 43139844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 47492123 - 47492182
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    |||||||||||||||||||||||||| |||| | || ||||||| |||||||||||||||    
T  47492123 cacaagcattgtgacattgtgattggccaatatgaccaatgtcacccaactctatgtcac 47492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 30580832 - 30580890
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtca 176  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| |||| |||||||||    
T  30580832 cacaagcactgtgacattgtgattgaccaatgtcacaaatgtcacccaattctatgtca 30580890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 39057089 - 39057015
Alignment:
Q  50 acatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctttcacaagc 124  Q
    |||||||||| |||||||||| |||||  || |||| |||||| ||| ||| |||||||||||||||||||||||    
T  39057089 acatagagttaggtgacattggtgacatcggacaatgacaatgtcacgatgtttgtgtttctctctttcacaagc 39057015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 40487497 - 40487443
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  40487497 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatacctatgcttc 40487443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 1272597 - 1272561
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||||||||||||||||||||||||||||||||    
T  1272597 gggtagcacttgggtgacatagagttgggtgacattg 1272561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 46220830 - 46220782
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgctt 243  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  46220830 tgcctacaaataatatgataaaatctaaatcactgaaataccaatgctt 46220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 47492061 - 47492109
Alignment:
Q  58 ttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 47492109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 49414562 - 49414526
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattg 70  Q
    |||||||||||||||||||||||||||||||||||||    
T  49414562 gggtagcacttgggtgacatagagttgggtgacattg 49414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 1801627 - 1801566
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct 111  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||    
T  1801627 acttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgtttgtgtttct 1801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 20987671 - 20987725
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  20987671 caaaatgcctacaaataatatgataaaatctaagtaactgaaattcttatgcttc 20987725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 21533725 - 21533779
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| |||||||| |||||||    
T  21533725 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttc 21533779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 26275734 - 26275780
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||    
T  26275734 acaaaatgcctacaaataatatgataaaatataagtcactgaaatac 26275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23799826 - 23799871
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatac 235  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||    
T  23799826 caaaatgcctacaaataatatgataaaatctaagtcattgaaatac 23799871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 7977648 - 7977584
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaa 98  Q
    ||||||| ||||||||||||||| || | |||||||||||| | ||||||| ||||||| |||||    
T  7977648 gggtagcgcttgggtgacatagaatttgatgacattgatgatattggccaaccacaatgtcacaa 7977584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 19339348 - 19339293
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| |||||||| ||||||||||||| |||||||||| |||||||| ||||||||    
T  19339348 acaaaatgcctacagataatatgataaaatctaagtcac-gaaatacccatgcttct 19339293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 21024167 - 21024111
Alignment:
Q  107 tttctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatc 163  Q
    ||||||||||||||||| |||||||||||||| |||  ||||||||| ||| |||||    
T  21024167 tttctctctttcacaagaattgtgacattgtgtttgaccaatgtcaccaatatcatc 21024111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 33689315 - 33689252
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||| ||||||||||||||         ||||||||||||||| |||||||||||||    
T  33689315 gggtagcacttgggtgacattgagttgggtgacat---------tggccaatcacaatgtcacaatgcttgtg 33689252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 55223279 - 55223219
Alignment:
Q  133 attgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctatacaaa 193  Q
    ||||||||||  |||| |||| ||||||| | |||||||||||||||||||||||| ||||    
T  55223279 attgtgattgaccaatatcaccaatgtcacctaactctatgtcacacaagtgctatccaaa 55223219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 9998639 - 9998584
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    |||| ||||||||||||||||||||||   |||||||| |||||||| ||||||||    
T  9998639 caaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttct 9998584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 19619885 - 19619842
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaat 233  Q
    |||| |||||||||||||||||||||| |||||||||| |||||    
T  19619885 caaaatgcctacaaataatatgataaaatctaagtcaccgaaat 19619842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 39430051 - 39429996
Alignment:
Q  36 gtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaat 91  Q
    |||||||||| |||||||| ||||||||||||||  ||||| ||||||| ||||||    
T  39430051 gtagcacttgagtgacataaagttgggtgacattagtgacattggccaagcacaat 39429996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 48199949 - 48199906
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaat 233  Q
    |||| |||||||| |||||||||||||||||||||||| |||||    
T  48199949 caaaatgcctacagataatatgataaattctaagtcaccgaaat 48199906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 49418691 - 49418726
Alignment:
Q  35 ggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||||||||||| ||||    
T  49418691 ggtagcacttgggtgacatagagttgggtgatattg 49418726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 4711654 - 4711600
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  4711654 caaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 4711600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 18321705 - 18321643
Alignment:
Q  126 ttgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||||||||||||||||  ||||||||| ||| ||| ||||||||||||  | ||||||||||    
T  18321705 ttgtgacattgtgattgaccaatgtcaccaatatcacccaactctatgttgcccaagtgctat 18321643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 21431785 - 21431731
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  21431785 caaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 21431731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 43139708 - 43139742
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacat 68  Q
    |||||||||||| ||||||||||||||||||||||    
T  43139708 gggtagcacttgagtgacatagagttgggtgacat 43139742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 47677331 - 47677392
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    ||||| ||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||    
T  47677331 cacaaacattgtgacattgtgattgatcaatgtcac---------ccaactctatgtcacacaagtgctat 47677392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 50524844 - 50524778
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||| ||||||||| ||| | | | |||||||||||  || |||||||||    
T  50524844 cacttgggtgacatagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtg 50524778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 51046061 - 51046135
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||| |||| |||||||||||||| ||| |||| ||||| ||  |||||| |||| ||||||| |||||    
T  51046061 acgggtagcatttggatgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtg 51046135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 21313200 - 21313163
Alignment:
Q  198 ctacaaataatatgataaattctaagtcactgaaatac 235  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  21313200 ctacaaataatatgataaaatctaagtcaccgaaatac 21313163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 46304441 - 46304490
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||| |||||||||||||  ||||||||| |||||||| |||||||    
T  46304441 tgcctacatataatatgataaaacctaagtcaccgaaatacccatgcttc 46304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 50550037 - 50549972
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||| | ||||||||||||||||||||| ||| ||| ||| || ||| |||| |||||    
T  50550037 cacaagcattgtaatattgtgattggtcaatgtcaccaatatcacccagctttatatcactcaagt 50549972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 52923038 - 52923087
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  52923038 tgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 52923087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 54149158 - 54149109
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||||||||||||||||| || ||||||| |||||| | |||||||    
T  54149158 tgcctacaaataatatgataaaatccaagtcaccgaaatagccatgcttc 54149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 30476550 - 30476586
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcaca 154  Q
    |||||||||||||||||||||||||  ||||||||||    
T  30476550 cacaagcattgtgacattgtgattgaccaatgtcaca 30476586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 35538996 - 35538960
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgaca 76  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  35538996 cacttggatgacatagagttgggtgacattggtgaca 35538960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 7188 - 7048
Alignment:
Q  40 cacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgt 137  Q
    |||||| ||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  7188 cacttgtgtgacatagagttgg-tgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 7090  T
Q  138 gattggtcaatgtcacaaatgtcatccaactctatgtcacac 179  Q
    ||||||  ||| |||| ||||||| |||||||||||||||||    
T  7089 gattggctaatatcaccaatgtcacccaactctatgtcacac 7048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 7123 - 7188
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtg 184  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  7123 cacaagcattgtgacattgtgattggccaatgtcaccaatgtca-ccaactctatgtcacacaagtg 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 7050 - 7109
Alignment:
Q  47 gtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||| ||| | | ||||||||||||| |||||||||||||    
T  7050 gtgacatagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtg 7109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 49813 - 49696
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctct--ctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactc 169  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  49813 tgacattggccaatcacaatgccacaatgcttgtgtttctctttctttcacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactc 49714  T
Q  170 tatgtcacacaagtgcta 187  Q
    |||||||| |||||||||    
T  49713 tatgtcacccaagtgcta 49696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 49691 - 49765
Alignment:
Q  32 acgggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  49691 acgggtagcacttgggtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtg 49765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 27361 - 27217
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtg 138  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||  |||||||||||| ||| ||||||||||    
T  27361 acttgggtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttctgtttctctctctttcacaagaattatgacattgtg 27262  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    ||||| |||| |||| ||||||| ||||||||||||||| |||||    
T  27261 attggccaatatcactaatgtcacccaactctatgtcacccaagt 27217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 27217 - 27282
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||||||||||||||||  ||| | ||||||||||||||| || ||| ||||||    
T  27217 acttgggtgacatagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtg 27282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 27299 - 27361
Alignment:
Q  121 aagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||| |||||||||||| |||| |||| ||||||| |||||||||| |||| |||||    
T  27299 aagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatatcacccaagt 27361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 17750896 - 17751047
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgttt--ctctctttcacaagcattgtgacat 134  Q
    ||||||||| ||||||||||||||  |||||||| ||||| ||| ||||||||||| ||||||| |||| |||  |||||||||||||||||||||||||    
T  17750896 tagcacttgtgtgacatagagttga-tgacattggtgacattggtcaatcacaatgtcacaatgtttgtatttatctctctttcacaagcattgtgacat 17750994  T
Q  135 tgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||| || ||||||||  ||| ||| |||||||||||||||||||||||||    
T  17750995 tgtgatcggccaatgtcatcaatatcacccaactctatgtcacacaagtgcta 17751047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 24618737 - 24618594
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacat 134  Q
    |||||||||||||||||||||||||||||| ||||         |||||||||||| ||||||||||||||||||||||  |||| ||||||| ||||||    
T  24618737 tagcacttgggtgacatagagttgggtgacgttga---------ccaatcacaatgtcacaatgcttgtgtttctctctctttcataagcattatgacat 24618647  T
Q  135 tgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||| |||||||||| ||||||| ||||||||||||||| |||||||||    
T  24618646 tgtgattgatcaatgtcaccaatgtcacccaactctatgtcactcaagtgcta 24618594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 12343106 - 12343232
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    |||||||||||||||||||||||||||||  |         |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  12343106 acttgggtgacatagagttgggtgacattagt---------caatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtg 12343196  T
Q  139 attggtcaatgtcacaaatgtcatccaactctatgt 174  Q
    ||||| ||||||||| ||| ||| ||||||||||||    
T  12343197 attggccaatgtcaccaatctcacccaactctatgt 12343232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 24587451 - 24587558
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtga 131  Q
    ||||||||||| ||||||||||||||||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||  || |||||||||||||||||    
T  24587451 gggtagcacttaggtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtgtttctcgctttttcacaagcattgtga 24587550  T
Q  132 cattgtga 139  Q
    ||||||||    
T  24587551 cattgtga 24587558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 551304 - 551192
Alignment:
Q  43 ttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgat 140  Q
    |||||||||||||| |||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  551304 ttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtggcattgtgat 551205  T
Q  141 tggtcaatgtcac 153  Q
    ||  |||||||||    
T  551204 tgaccaatgtcac 551192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 17751050 - 17750895
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctctt--tcacaagcattgtga 131  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||         |    |||| ||||||||    
T  17751050 gggtagcacttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtga 17750951  T
Q  132 cattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||    
T  17750950 cattgtgattgaccaatgtcaccaatgtcat-caactctatgtcacacaagtgctat 17750895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 13043502 - 13043602
Alignment:
Q  89 aatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgct 186  Q
    |||| |||||||||||||||||||  ||||||||||||||||||| ||||||||| | ||||||||| ||| |||  |||||||||||||| ||| ||||    
T  13043502 aatgtcacaatgcttgtgtttctctctctttcacaagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctatgtcacccaaatgct 13043601  T
Q  187 a 187  Q
    |    
T  13043602 a 13043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 24975749 - 24975814
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||    
T  24975749 acttgggtgacatagagttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtg 24975814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 10521959 - 10521876
Alignment:
Q  72 tgacaatggccaatcacaatgccacaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    ||||| ||| ||||||||||| || |||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||    
T  10521959 tgacattggtcaatcacaatgtcataatgcttgtgtttctctctctttcataagcattgtgacattgtgattggccaatgtcac 10521876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 7384552 - 7384481
Alignment:
Q  116 ttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  7384552 ttcacaaacattatgacattgtgattggtcaatgtcactaatgtcatccaactctatatcacctaagtgcta 7384481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 2315443 - 2315331
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttc--tctctttcacaagcattgtga 131  Q
    |||||||||||| ||||||||||||| |||||||||||     ||    ||||||||| ||| ||||||| ||||||  |||||||||||| ||||||||    
T  2315443 gggtagcacttgtgtgacatagagttaggtgacattga-----at----aatcacaataccataatgcttatgtttcgctctctttcacaaacattgtga 2315353  T
Q  132 cattgtgattggtcaatgtcac 153  Q
    ||||||||||| ||||||||||    
T  2315352 cattgtgattgatcaatgtcac 2315331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 24587523 - 24587454
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgcta 187  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||||  ||||||||    
T  24587523 cacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctatgtcacctaagtgcta 24587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 24975815 - 24975749
Alignment:
Q  117 tcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagt 183  Q
    |||||||||||||| |||||||||||  ||||||||| ||||||| ||||||||||||||| |||||    
T  24975815 tcacaagcattgtggcattgtgattgaccaatgtcaccaatgtcagccaactctatgtcacccaagt 24975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 24618591 - 24618660
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgctt 103  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| || |||||||    
T  24618591 gggtagcacttgagtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcataatgctt 24618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 31654304 - 31654376
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctctct 115  Q
    ||||||||||||||||| |||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||    
T  31654304 gggtagcacttgggtgatatagagttgggtgacattg---------gccaatcacaatgtcacaatgcttgtgtttctctct 31654376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 12343232 - 12343176
Alignment:
Q  50 acatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||    
T  12343232 acatagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtg 12343176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 13043605 - 13043533
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    |||||||| |||||||||||||||||| |||| |||| ||||| |||| |||||||||  |||||||||||||    
T  13043605 gggtagcatttgggtgacatagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtg 13043533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 551241 - 551300
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcac 177  Q
    ||||||||||||| |||||||||||| ||||||||| ||| |||||||| ||||||||||    
T  551241 cacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaattctatgtcac 551300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 33053084 - 33053138
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   ||||||||||||||||| |||||||    
T  33053084 caaaatgcctacaaataatatgataaaacttaagtcactgaaatacccatgcttc 33053138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 4010433 - 4010482
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||| |||||||||||||||||||||||||| |||||||  |||||||    
T  4010433 tgcctataaataatatgataaattctaagtcaccgaaatactcatgcttc 4010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 29255367 - 29255408
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacc 236  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  29255367 tgcctacaaataatatgataaaatctaagtcaccgaaatacc 29255408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 7384478 - 7384550
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||||||||| ||||| |||||||||| |||||||  ||||| || |||||||||||| || |||| |||||    
T  7384478 gggtagcacttaggtgatatagagttggatgacattagtgacattgaccaatcacaatgtcataatgtttgtg 7384550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 3913490 - 3913545
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    |||| ||||||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  3913490 caaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgcttct 3913545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 20226026 - 20225971
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| |||||||||||||||||||||||||||| |||  |||||||  |||||||    
T  20226026 acaaaatgcctacaaataatatgataaattctaactcatcgaaatactcatgcttc 20225971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 22120010 - 22119955
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| |||||||||||||||||||||||||||| |||  |||||||  |||||||    
T  22120010 acaaaatgcctacaaataatatgataaattctaactcatcgaaatactcatgcttc 22119955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 24618677 - 24618712
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||||||||||||||||||||| |||||    
T  24618677 cacaagcattgtgacattgtgattggtcaacgtcac 24618712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 31654367 - 31654332
Alignment:
Q  118 cacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||||||||||||||||||||||| |||||||||    
T  31654367 cacaagcattgtgacattgtgattggccaatgtcac 31654332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 127843 - 127789
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| |||||||||||||||||||||| ||||| |||| |||||||  |||||||    
T  127843 caaaatgcctacaaataatatgataaaatctaaatcaccgaaatactcatgcttc 127789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 13546624 - 13546654
Alignment:
Q  197 cctacaaataatatgataaattctaagtcac 227  Q
    |||||||||||||||||||||||||||||||    
T  13546624 cctacaaataatatgataaattctaagtcac 13546654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 23128792 - 23128738
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  23128792 caaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttc 23128738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 10521851 - 10521884
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||||||||||||||||||||| ||||||||||    
T  10521851 tagcacttgggtgacatagagtttggtgacattg 10521884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 30608436 - 30608477
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacc 236  Q
    |||||||||||||||||||||| | |||||||| ||||||||    
T  30608436 tgcctacaaataatatgataaaatataagtcaccgaaatacc 30608477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 34018729 - 34018680
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||||||||||||||||||||   ||||||||||||||||  |||||||    
T  34018729 tgcctacaaataatatgataaaacataagtcactgaaatactcatgcttc 34018680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 551164 - 551200
Alignment:
Q  34 gggtagcacttgggtgacatagagttgggtgacattg 70  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  551164 gggtaacacttgggtggcatagagttgggtgacattg 551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 1523583 - 1523527
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| |||||||||||||||||||||| ||||| ||||   |||||| ||||||||    
T  1523583 acaaaatgcctacaaataatatgataaaatctaaatcaccagaatacccatgcttct 1523527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 9380198 - 9380142
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttct 245  Q
    ||||| ||| |||||||||||||||||| ||||| ||||  ||||||| ||||||||    
T  9380198 acaaaatgcatacaaataatatgataaaatctaaatcaccaaaatacccatgcttct 9380142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 13766746 - 13766774
Alignment:
Q  43 ttgggtgacatagagttgggtgacattga 71  Q
    |||||||||||||||||||||||||||||    
T  13766746 ttgggtgacatagagttgggtgacattga 13766774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 63763 - 63868
Alignment:
Q  41 acttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtgtttctc--tctttcacaagcattgtgacattgtg 138  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  63763 acttgggtgacatagagttgggtgacattg---------gccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtg 63853  T
Q  139 attggtcaatgtcac 153  Q
    ||||| |||||||||    
T  63854 attggccaatgtcac 63868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 19207 - 19114
Alignment:
Q  97 aatgcttgtgtttctct--ctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtcatccaactctatgtcacacaagtgctat 188  Q
    |||| ||||||||||||  ||| ||||||||||||||||||||||||| ||||| |||  ||||||| ||||||||||||||||||| ||||||    
T  19207 aatgtttgtgtttctctttcttccacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctatgtcacacaaatgctat 19114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 19115 - 19184
Alignment:
Q  37 tagcacttgggtgacatagagttgggtgacattgatgacaatggccaatcacaatgccacaatgcttgtg 106  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||  ||||||||||| |||||||||||||    
T  19115 tagcatttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtg 19184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1033 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  96 caatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtc 151  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1029 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  96 caatgcttgtgtttctc--tctttcacaagcattgtgacattgtgattggtcaatgtc 151  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

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Target: scaffold0481 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 2974 - 2914
Alignment:
Q  95 acaatgcttgtgtttctctct--ttcacaagcattgtgacattgtgattggtcaatgtcac 153  Q
    |||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||    
T  2974 acaatgtttgtgtttctctctctttcacaaacattgtgacattgtgattggtcaatatcac 2914  T

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Target: scaffold0536 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 4963 - 4911
Alignment:
Q  109 tctctctttcacaagcattgtgacattgtgattggtcaatgtcacaaatgtca 161  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  4963 tctctctttcacaagcattgtaatattgtgattggtcgatgtcaccaatgtca 4911  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 36991 - 36944
Alignment:
Q  197 cctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  36991 cctacaaataatatgataaaatctaaatcactgaaatacccatgcttc 36944  T

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Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 31189 - 31244
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| |||||| ||||||||||||||| |||||||||| |||||||| |||||||    
T  31189 acaaaatgcctataaataatatgataaaatctaagtcaccgaaatacccatgcttc 31244  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 32662 - 32717
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||  |||||||    
T  32662 acaaaatgcctacaaataatatgataaaatctaagtcaccgaaatactcatgcttc 32717  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 38222 - 38183
Alignment:
Q  197 cctacaaataatatgataaattctaagtcactgaaatacc 236  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  38222 cctacaaataatatgataaaatctaagtcaccgaaatacc 38183  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 65957 - 66012
Alignment:
Q  189 acaaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    ||||| ||||||||||||||||||||||   |||||||| |||||||| |||||||    
T  65957 acaaaatgcctacaaataatatgataaaacataagtcaccgaaatacccatgcttc 66012  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 15665 - 15611
Alignment:
Q  190 caaagtgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||| ||||||||||||||||||||||  ||||||||| |||||| | |||||||    
T  15665 caaaatgcctacaaataatatgataaaacctaagtcaccgaaatatccatgcttc 15611  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 1740 - 1789
Alignment:
Q  195 tgcctacaaataatatgataaattctaagtcactgaaatacctatgcttc 244  Q
    |||||||||||||||||||||| | |||||||  |||||||| |||||||    
T  1740 tgcctacaaataatatgataaaatataagtcatcgaaatacccatgcttc 1789  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 154
Target Start/End: Complemental strand, 105430 - 105402
Alignment:
Q  126 ttgtgacattgtgattggtcaatgtcaca 154  Q
    |||||||||||||||||||||||||||||    
T  105430 ttgtgacattgtgattggtcaatgtcaca 105402  T

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