View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10580_low_44 (Length: 204)
Name: NF10580_low_44
Description: NF10580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10580_low_44 |
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Alignment Details
Target: chr8 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 32725525 - 32725346
Alignment:
| Q |
18 |
atcacatcatattttaattcacttttgaaagtgtaacat----tccttcgattaattaacgtaagtaaggatttagctaagcctaacaacttcagatata |
113 |
Q |
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| T |
32725525 |
atcacatcatattttaattcacttttgaaagtgtaacatatattccttcgattaattaacgtaagtaaggatttagctaagcctaacaacttcagatata |
32725426 |
T |
|
| Q |
114 |
caagaagtccattttaaagatagatagatagataacttaacaataatgtgaacctacgaaataataggggtcctatgcta |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32725425 |
caagaagtccattttaaagatagatagatagataacttaacaataatgtgaacctacgaaataataggggtcctaggcta |
32725346 |
T |
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