View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10581_low_26 (Length: 241)
Name: NF10581_low_26
Description: NF10581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10581_low_26 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 54863115 - 54863337
Alignment:
| Q |
19 |
cttagctacaatcgttgtaatgataaatgatttgatcgaatgtttggaatgattgatgaaccaaattggttattgatacatttaataatgatagttattt |
118 |
Q |
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| T |
54863115 |
cttagctacaatcgttgtaatgataaatgatttgatcgaatgtttggaatgattgatgaaccaaattggttattgatacatttaataatgatagttattt |
54863214 |
T |
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| Q |
119 |
gaactcttaagaataattcttacaatgcataattataaggttgcacaaataatccaagtgaaagattgttagatctttaatccaacattgacttcacgtg |
218 |
Q |
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| T |
54863215 |
gaactcttaagaataattcttacaatgcataattataaggttgcacaaataatccaagtaaaagattgttagatctttaatccaacattgacttcacgtg |
54863314 |
T |
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| Q |
219 |
tgaacaattatgtatcctagatt |
241 |
Q |
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| T |
54863315 |
tgaacaattatgtatcgtagatt |
54863337 |
T |
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