View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10581_low_37 (Length: 215)
Name: NF10581_low_37
Description: NF10581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10581_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 11326216 - 11326418
Alignment:
| Q |
1 |
tgagggacttacatacagttggttcatgatttgctacattttattaaattcgtgtgtcaaagtataatatgttcggtctgaattatcccactccat---a |
97 |
Q |
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| T |
11326216 |
tgagggatttacatacagttggttcatgatttgctacattttattaaattcgtgtgtcaaagtataatttgttgggtctgaattatcccactccatcata |
11326315 |
T |
|
| Q |
98 |
tcatatctacatatagttgctcaagctcaaccaacctcaatgtatacggtacattgtacactcaaaatgacatcattttccaaattgatccaagcatccc |
197 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11326316 |
tcatatctacatatagttgctcaagctcaactaacctcaatgtatacggtacagtgtacactcaaaatgacatcattttccaaattgatccaagcatccc |
11326415 |
T |
|
| Q |
198 |
ctg |
200 |
Q |
| |
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||| |
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| T |
11326416 |
ctg |
11326418 |
T |
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