View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10582_high_4 (Length: 317)
Name: NF10582_high_4
Description: NF10582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10582_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 7 - 298
Target Start/End: Complemental strand, 11145647 - 11145353
Alignment:
| Q |
7 |
aaagtgaatataggttatcttatatctaattagttttgttatgcgac--ggtaatatgatggatcatcatttgacgagggtgtccatgttcttgtgctat |
104 |
Q |
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| T |
11145647 |
aaagtgaatataggttatcttatatctaattagttttgttatgcgacacggtaatatgatggatcatcatttgacgagggtgtccatgttcttgtgttat |
11145548 |
T |
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| Q |
105 |
tgtcctgatccaaatttaatttgttcttatttgtataactcatgtcttttacaattaaagcaatacgtttttcccttaac-aaaatgttataaaattatt |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
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| T |
11145547 |
tgtcctgatccaaatttaatttgttcttatttgtataactcatgtcttttacaattaaagcaatacgtttttcccataacaaaaatgttataaaattatt |
11145448 |
T |
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| Q |
204 |
aggacttaataaagagtggatatgaggtagcaactagggttgaagcatatgaccgagaaccatggtagaactttatagatgatgagagatgatat |
298 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
11145447 |
aggacttaataaagagtggatatgaggaagcaactagggttgaagcatatgaccgagaacgatggtagaactttatagatgatgagagatgatat |
11145353 |
T |
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