View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10582_low_1 (Length: 420)
Name: NF10582_low_1
Description: NF10582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10582_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 15 - 419
Target Start/End: Original strand, 25919533 - 25919937
Alignment:
| Q |
15 |
acttttgatgcccagactttggtacaaatgaaactcatgaagacagcataagcctccaatattccattttgtatcagaagaacacatcctatcttcattg |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
25919533 |
acttttgatgcccagactttggtacaaatgaaactcataaagacagcgtaagcctccaacattccattttgtatcagaagaacacatcctatcttcattg |
25919632 |
T |
|
| Q |
115 |
aaggatttcctatcatctccaatcatgacaataaggaagtcatcacggagtacattttaagtgaaaaggcggaaggaaacttcaatcagagatcaaattc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25919633 |
aaggatttcctatcatctccaatcatgacaataaggaagtcatcacggagtacattctaagtgaaaaggcggaaggaaacttcaatcagagatcaaattc |
25919732 |
T |
|
| Q |
215 |
cgaatactccagttgatgtctacagagaacccataagaaggaatactctagaagaagtgactcaacatcctatcagaagatctccagtgaaaacttcaaa |
314 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| |
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| T |
25919733 |
cgaatactccagctgatgtctacagagaacccataagaaggaatactccagaagaagtgactcaacatcctatcagaagatctccggtcaaaacttcaaa |
25919832 |
T |
|
| Q |
315 |
caagatagacaaatctcttgaagaagaagtaggtgaaattttggattaagtacctattgaatcaccccaaacaaatagtaagaaggctaaagtaacgact |
414 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
25919833 |
gaagatagacaaatctcttgaagaagaagtagatgaaattttggattaagtacctattgaatcacctcaaacaaatagtaagaaggctaaagtaacgact |
25919932 |
T |
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| Q |
415 |
ccgcc |
419 |
Q |
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||||| |
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| T |
25919933 |
ccgcc |
25919937 |
T |
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