View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10582_low_9 (Length: 339)
Name: NF10582_low_9
Description: NF10582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10582_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 18 - 332
Target Start/End: Original strand, 27125719 - 27126033
Alignment:
| Q |
18 |
cattgcatagcatttcgttcaacagtacagtgagaccgtcacctaccctcattgacaaagccaatcccaaacgttatgcagacaccgattttgaaacttt |
117 |
Q |
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| T |
27125719 |
cattgcatagcatttcgttcaacagtacagtgagaccttcacctacactcattgacaaagccaatcccaaacgttatgcagacaccgattttgaaacttt |
27125818 |
T |
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| Q |
118 |
tcttgcctacatttcaaccaacgagaccaagagaaagagtattctggagtctaggaaattgacttctatcttacttgactaagaaaagaacgaactattg |
217 |
Q |
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| T |
27125819 |
tcttgcctacatttcaaccaacgagaccaagagaaagagttttctggagtctaggaaattgacttctatcttacttgactaagaaaagaatgaactattg |
27125918 |
T |
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| Q |
218 |
aagtcaaagaaagaaggaaaaataattattattcatatatattaattaaagtgccacatattgcacacaataattgattatttacctaggggaaaatttg |
317 |
Q |
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| T |
27125919 |
aagtcaaagaaagaaggaaaaataattattattcatatatattaattaaagtgccacatattgcacacaataattgattatttacctagggaaaaatttg |
27126018 |
T |
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| Q |
318 |
taggtgcctttgctt |
332 |
Q |
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| T |
27126019 |
taggtgcctgtgctt |
27126033 |
T |
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