View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10583_11 (Length: 401)
Name: NF10583_11
Description: NF10583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10583_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 385; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 401
Target Start/End: Original strand, 36036812 - 36037212
Alignment:
| Q |
1 |
atttttacatccttgattatacaggaaccatatgttgtgatagaagtggttaccgttctgatatctgtgtgatgaaaggcaatataagaacacattcttc |
100 |
Q |
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| T |
36036812 |
atttttacttccttgattatacaggaaccatatgttgtgatagaagtggttaccgttctgatatctgtgtgatgaaaggcgatataagaacacattcttc |
36036911 |
T |
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| Q |
101 |
tgcctcttcaatcttcctctacaactcaataagccacggcaataatgtttcaaggactattgaagctcgaaaaggtgaagatgaagaggatcaagtgctc |
200 |
Q |
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| T |
36036912 |
ttcctcttcaatcttcctctacaactcaataagccacggcaataatgtttcaaggactattgaagctcgaaaaggtgaagatgaagaggatcaagtgctc |
36037011 |
T |
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| Q |
201 |
caacatgaaaagataaagccctatactagaaagtgggagacaagtgtcatggacaccattgatgaattgaacctcatttcaaagaaggtgaatttgccta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36037012 |
caacatgaaaagataaagccctatactagaaagtgggagacaagtgtcatggacaccattgatgaattgaacctcatttcaaagaaggtgaattcgccta |
36037111 |
T |
|
| Q |
301 |
gtgttcgaggttgtgatgttcaacatgatgttccagctgtgtttttctcgaatggaggctacaccggcaatgtgtatcacgaattcaacgatggaatcat |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36037112 |
gtgttcgaggttgtgatgttcaacatgatgttccagctgtgtttttctcgaatggaggctacaccggcaatgtgtatcacgaattcaacgatggaatcat |
36037211 |
T |
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| Q |
401 |
a |
401 |
Q |
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| T |
36037212 |
a |
36037212 |
T |
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