View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10583_18 (Length: 357)
Name: NF10583_18
Description: NF10583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10583_18 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 24 - 345
Target Start/End: Complemental strand, 39717213 - 39716892
Alignment:
| Q |
24 |
tctgtaagtttatccatcacataaaatacaaaatgtttcttactactgttttcataatctagttttttcttcatattctcaaatattttttgctaatcaa |
123 |
Q |
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|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39717213 |
tctgtaagtttatctatcacataaagtacaaaatgtttcttactactgttttcataatctagttttttcttcatattctcaaatattttttgctaatcaa |
39717114 |
T |
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| Q |
124 |
tctacaggaccctggcttctattggattttctggaacactttctccctcaattaccagattgaaatatttggttaacttgtaagtctctttataattagt |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39717113 |
tctacaggaccctggcttctattggattttctggaacactttctccctcaattaccagattgaaatatttggttaacttgtaagtctctttataattagt |
39717014 |
T |
|
| Q |
224 |
tgacattaattagattggcagcttatccaactaatgaactatagcagcatgatgatgccataacaattaaagtagtgtttggattttacttttcttagcc |
323 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39717013 |
tgacattaattagattggctgcttatccaactaatgaactatagcagcatgatgatgccataacaattaaagtagtgtttggattttacttttcttagcc |
39716914 |
T |
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| Q |
324 |
atacaatgaagagtttgatttt |
345 |
Q |
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|||||||||||||||||||||| |
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| T |
39716913 |
atacaatgaagagtttgatttt |
39716892 |
T |
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