View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10583_2 (Length: 739)

Name: NF10583_2
Description: NF10583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10583_2
NF10583_2
[»] chr2 (41 HSPs)
chr2 (1-720)||(12315234-12315952)
chr2 (158-301)||(8455317-8455460)
chr2 (158-301)||(10543689-10543834)
chr2 (158-301)||(10546153-10546297)
chr2 (157-285)||(14444719-14444846)
chr2 (166-278)||(32781312-32781424)
chr2 (158-301)||(14530309-14530454)
chr2 (158-301)||(21779262-21779403)
chr2 (158-301)||(39914307-39914450)
chr2 (158-285)||(11514427-11514553)
chr2 (158-241)||(24200686-24200769)
chr2 (158-286)||(31158455-31158585)
chr2 (158-240)||(19614983-19615065)
chr2 (166-301)||(9671180-9671313)
chr2 (158-242)||(12023979-12024062)
chr2 (158-301)||(17896250-17896394)
chr2 (158-242)||(19977774-19977858)
chr2 (161-221)||(29419970-29420030)
chr2 (158-242)||(31821403-31821485)
chr2 (158-242)||(17380297-17380380)
chr2 (160-240)||(23145760-23145840)
chr2 (160-240)||(23557550-23557630)
chr2 (158-257)||(21377118-21377217)
chr2 (158-257)||(25641493-25641591)
chr2 (158-242)||(17667993-17668077)
chr2 (168-239)||(17705496-17705567)
chr2 (168-242)||(17623565-17623639)
chr2 (183-301)||(36871509-36871625)
chr2 (158-240)||(40416933-40417015)
chr2 (191-301)||(40762235-40762345)
chr2 (158-258)||(5450276-5450377)
chr2 (158-278)||(44643513-44643634)
chr2 (158-234)||(5841019-5841095)
chr2 (158-234)||(7214525-7214601)
chr2 (191-285)||(17471572-17471668)
chr2 (158-210)||(23397757-23397809)
chr2 (178-241)||(15296468-15296531)
chr2 (158-301)||(25249739-25249881)
chr2 (166-221)||(33795284-33795339)
chr2 (160-285)||(99282-99405)
chr2 (169-257)||(22371059-22371144)
[»] scaffold0049 (1 HSPs)
scaffold0049 (158-301)||(58968-59113)
[»] chr3 (49 HSPs)
chr3 (157-278)||(12914059-12914180)
chr3 (158-283)||(8247706-8247833)
chr3 (158-301)||(40272813-40272956)
chr3 (158-301)||(13628791-13628936)
chr3 (158-285)||(7943003-7943130)
chr3 (158-240)||(13730666-13730748)
chr3 (158-240)||(30928209-30928291)
chr3 (158-301)||(516422-516568)
chr3 (158-301)||(39203529-39203670)
chr3 (158-283)||(46421054-46421181)
chr3 (158-301)||(26869720-26869862)
chr3 (160-285)||(34420660-34420786)
chr3 (160-285)||(26573142-26573267)
chr3 (158-242)||(4495724-4495808)
chr3 (158-302)||(22609779-22609922)
chr3 (158-240)||(29366784-29366866)
chr3 (166-301)||(1217111-1217244)
chr3 (169-285)||(6411839-6411954)
chr3 (173-278)||(10795447-10795554)
chr3 (178-301)||(31592882-31593003)
chr3 (158-285)||(33926096-33926223)
chr3 (158-221)||(10870033-10870095)
chr3 (158-217)||(35417929-35417988)
chr3 (158-221)||(54032640-54032703)
chr3 (178-240)||(14986990-14987052)
chr3 (158-302)||(22122917-22123059)
chr3 (160-240)||(45620890-45620971)
chr3 (158-219)||(53062051-53062112)
chr3 (161-285)||(53996582-53996707)
chr3 (185-301)||(54484730-54484847)
chr3 (158-221)||(9607216-9607279)
chr3 (166-285)||(19731023-19731142)
chr3 (178-241)||(55401209-55401272)
chr3 (158-211)||(5173811-5173864)
chr3 (158-242)||(7696947-7697029)
chr3 (166-234)||(33235552-33235621)
chr3 (168-285)||(45948855-45948972)
chr3 (166-246)||(52428533-52428614)
chr3 (161-221)||(12525423-12525483)
chr3 (158-234)||(39212003-39212079)
chr3 (166-241)||(1121286-1121361)
chr3 (158-221)||(45139559-45139622)
chr3 (190-241)||(45786277-45786328)
chr3 (160-285)||(54374362-54374488)
chr3 (158-275)||(16735454-16735570)
chr3 (160-241)||(25944484-25944565)
chr3 (177-221)||(43114950-43114995)
chr3 (191-240)||(49013537-49013586)
chr3 (158-207)||(52926305-52926354)
[»] chr8 (39 HSPs)
chr8 (158-301)||(28817627-28817770)
chr8 (158-301)||(35261670-35261813)
chr8 (158-285)||(36720787-36720914)
chr8 (166-301)||(39460995-39461132)
chr8 (158-278)||(2626510-2626633)
chr8 (168-285)||(44530150-44530267)
chr8 (159-285)||(29521702-29521828)
chr8 (158-242)||(17823567-17823651)
chr8 (158-241)||(18164821-18164903)
chr8 (168-302)||(45071266-45071399)
chr8 (173-278)||(5135313-5135418)
chr8 (158-278)||(12670274-12670392)
chr8 (158-278)||(13160693-13160812)
chr8 (161-277)||(22598151-22598267)
chr8 (158-240)||(20869560-20869640)
chr8 (168-221)||(6760823-6760876)
chr8 (169-301)||(12625891-12626024)
chr8 (158-285)||(20284086-20284217)
chr8 (160-241)||(44781567-44781648)
chr8 (158-301)||(30454098-30454239)
chr8 (166-242)||(389642-389720)
chr8 (158-285)||(21070714-21070846)
chr8 (166-245)||(36918123-36918202)
chr8 (178-284)||(8483956-8484062)
chr8 (184-278)||(29877111-29877205)
chr8 (168-240)||(26954133-26954206)
chr8 (166-218)||(30962857-30962909)
chr8 (158-237)||(11748290-11748369)
chr8 (158-221)||(28407407-28407469)
chr8 (158-240)||(7136591-7136673)
chr8 (158-283)||(8897783-8897908)
chr8 (160-241)||(42083760-42083841)
chr8 (166-234)||(14018037-14018105)
chr8 (178-285)||(5689642-5689749)
chr8 (158-240)||(25250513-25250595)
chr8 (158-278)||(24365083-24365204)
chr8 (166-211)||(31457172-31457217)
chr8 (166-239)||(35105922-35105995)
chr8 (168-241)||(44742580-44742653)
[»] chr1 (46 HSPs)
chr1 (158-301)||(46247954-46248097)
chr1 (158-242)||(18724605-18724689)
chr1 (158-285)||(14617052-14617179)
chr1 (158-285)||(23768337-23768464)
chr1 (158-301)||(10668239-10668384)
chr1 (158-299)||(46991818-46991959)
chr1 (160-301)||(35005139-35005282)
chr1 (158-301)||(18944657-18944803)
chr1 (158-301)||(27201661-27201806)
chr1 (161-278)||(32632581-32632697)
chr1 (160-241)||(35117829-35117910)
chr1 (158-278)||(47214525-47214643)
chr1 (158-242)||(4430086-4430170)
chr1 (166-278)||(25468287-25468399)
chr1 (168-240)||(30395790-30395862)
chr1 (158-301)||(34725099-34725240)
chr1 (158-301)||(20004091-20004236)
chr1 (158-278)||(11596527-11596646)
chr1 (158-230)||(22327113-22327185)
chr1 (158-258)||(22930113-22930211)
chr1 (158-242)||(41319866-41319950)
chr1 (158-285)||(6925114-6925241)
chr1 (158-241)||(9939475-9939558)
chr1 (168-278)||(27136675-27136786)
chr1 (158-221)||(50760307-50760370)
chr1 (160-241)||(50811955-50812037)
chr1 (160-241)||(2435848-2435929)
chr1 (166-278)||(12126861-12126971)
chr1 (160-241)||(17470407-17470488)
chr1 (158-282)||(20036234-20036359)
chr1 (158-278)||(35253211-35253329)
chr1 (158-242)||(38478342-38478424)
chr1 (205-301)||(4349699-4349795)
chr1 (159-285)||(19701585-19701712)
chr1 (186-285)||(23796507-23796606)
chr1 (158-221)||(25290177-25290242)
chr1 (161-242)||(23371141-23371221)
chr1 (158-278)||(45812561-45812679)
chr1 (160-255)||(6983858-6983951)
chr1 (178-278)||(30682848-30682946)
chr1 (185-301)||(31382215-31382330)
chr1 (166-285)||(45264416-45264536)
chr1 (158-221)||(8197057-8197120)
chr1 (158-241)||(33222998-33223080)
chr1 (184-234)||(20169157-20169207)
chr1 (167-241)||(39215020-39215094)
[»] chr7 (48 HSPs)
chr7 (158-302)||(11617588-11617732)
chr7 (158-301)||(23419675-23419818)
chr7 (158-242)||(19426949-19427033)
chr7 (161-257)||(27629628-27629724)
chr7 (160-277)||(7644949-7645066)
chr7 (158-285)||(8148963-8149090)
chr7 (158-285)||(35334833-35334958)
chr7 (158-301)||(42391101-42391242)
chr7 (166-285)||(2541036-2541155)
chr7 (158-240)||(42805515-42805597)
chr7 (158-301)||(32758252-32758393)
chr7 (158-301)||(43557463-43557609)
chr7 (158-240)||(47716450-47716532)
chr7 (168-301)||(7879639-7879772)
chr7 (166-301)||(21172010-21172143)
chr7 (166-278)||(48123508-48123620)
chr7 (166-241)||(35203438-35203513)
chr7 (158-301)||(42798660-42798803)
chr7 (158-278)||(10693097-10693215)
chr7 (158-278)||(19266441-19266561)
chr7 (168-240)||(46354195-46354267)
chr7 (158-241)||(5180218-5180301)
chr7 (158-257)||(14099051-14099150)
chr7 (158-257)||(14409068-14409167)
chr7 (171-246)||(15108453-15108527)
chr7 (158-241)||(22699031-22699114)
chr7 (158-285)||(33871927-33872053)
chr7 (179-301)||(34626209-34626330)
chr7 (158-242)||(11741786-11741868)
chr7 (158-278)||(13805093-13805212)
chr7 (166-278)||(18512477-18512588)
chr7 (157-285)||(38262213-38262341)
chr7 (166-241)||(12473303-12473378)
chr7 (166-221)||(16341277-16341332)
chr7 (158-221)||(29907410-29907473)
chr7 (179-257)||(1408469-1408547)
chr7 (160-285)||(18747479-18747605)
chr7 (186-283)||(38604546-38604642)
chr7 (158-278)||(42476864-42476982)
chr7 (158-301)||(48735123-48735265)
chr7 (166-262)||(28362185-28362281)
chr7 (166-210)||(31591199-31591243)
chr7 (161-221)||(42495917-42495976)
chr7 (158-210)||(47077945-47077997)
chr7 (158-212)||(7794596-7794650)
chr7 (168-221)||(18327035-18327087)
chr7 (160-257)||(19265808-19265904)
chr7 (168-213)||(21447591-21447636)
[»] chr4 (54 HSPs)
chr4 (1-121)||(38834987-38835107)
chr4 (160-285)||(19027841-19027966)
chr4 (162-257)||(47443952-47444047)
chr4 (158-240)||(16408665-16408747)
chr4 (158-301)||(44363131-44363276)
chr4 (166-250)||(39077848-39077930)
chr4 (158-278)||(5648250-5648369)
chr4 (158-302)||(6430626-6430769)
chr4 (158-301)||(48598826-48598967)
chr4 (158-257)||(5306709-5306807)
chr4 (160-283)||(17043413-17043536)
chr4 (166-285)||(37494850-37494969)
chr4 (159-301)||(30639372-30639513)
chr4 (161-257)||(9832358-9832452)
chr4 (158-242)||(11054208-11054290)
chr4 (158-278)||(7385500-7385620)
chr4 (158-299)||(21646955-21647098)
chr4 (158-278)||(25463113-25463233)
chr4 (158-241)||(7038044-7038126)
chr4 (184-301)||(20639659-20639777)
chr4 (158-301)||(20224975-20225116)
chr4 (158-257)||(47528575-47528672)
chr4 (158-301)||(23501784-23501923)
chr4 (166-257)||(35567169-35567260)
chr4 (158-257)||(54967012-54967110)
chr4 (158-301)||(16911553-16911698)
chr4 (159-300)||(29207900-29208039)
chr4 (168-278)||(40915830-40915939)
chr4 (168-285)||(14983835-14983952)
chr4 (160-272)||(41018824-41018935)
chr4 (185-302)||(7909280-7909397)
chr4 (199-301)||(25629081-25629183)
chr4 (158-212)||(54730240-54730294)
chr4 (179-283)||(9987853-9987957)
chr4 (158-246)||(10379999-10380086)
chr4 (160-212)||(30352681-30352733)
chr4 (160-212)||(30690273-30690325)
chr4 (178-234)||(39029129-39029185)
chr4 (191-283)||(51865057-51865149)
chr4 (158-241)||(54175054-54175137)
chr4 (167-241)||(30581527-30581602)
chr4 (158-221)||(42164230-42164292)
chr4 (160-211)||(49938681-49938732)
chr4 (158-220)||(487217-487279)
chr4 (179-233)||(21489099-21489153)
chr4 (160-222)||(23580288-23580350)
chr4 (178-220)||(36589754-36589796)
chr4 (160-242)||(47441590-47441672)
chr4 (166-212)||(54640429-54640475)
chr4 (158-299)||(10660395-10660538)
chr4 (158-299)||(10874540-10874683)
chr4 (160-241)||(25343180-25343261)
chr4 (160-209)||(30496413-30496462)
chr4 (160-221)||(43035241-43035302)
[»] chr5 (28 HSPs)
chr5 (159-241)||(42924895-42924977)
chr5 (158-301)||(38879572-38879717)
chr5 (158-301)||(8169985-8170126)
chr5 (158-301)||(24448881-24449024)
chr5 (158-301)||(41014310-41014452)
chr5 (158-301)||(32703415-32703556)
chr5 (170-284)||(43574609-43574723)
chr5 (181-257)||(24903741-24903817)
chr5 (158-240)||(4619168-4619250)
chr5 (158-240)||(27328743-27328825)
chr5 (192-285)||(16880664-16880757)
chr5 (189-285)||(7097777-7097872)
chr5 (158-241)||(43334193-43334277)
chr5 (178-285)||(19142960-19143066)
chr5 (166-221)||(22025542-22025597)
chr5 (161-242)||(34074622-34074703)
chr5 (161-241)||(22187279-22187359)
chr5 (166-301)||(35710312-35710445)
chr5 (158-210)||(37024646-37024698)
chr5 (158-221)||(23974771-23974834)
chr5 (171-274)||(41425952-41426055)
chr5 (178-240)||(13801831-13801893)
chr5 (168-301)||(1405188-1405321)
chr5 (158-242)||(22600445-22600529)
chr5 (178-262)||(24323745-24323829)
chr5 (178-262)||(24360369-24360453)
chr5 (166-216)||(28516520-28516570)
chr5 (157-198)||(17419904-17419945)
[»] chr6 (25 HSPs)
chr6 (158-301)||(29355856-29356001)
chr6 (158-301)||(12221915-12222061)
chr6 (167-283)||(18277212-18277328)
chr6 (160-285)||(23240841-23240964)
chr6 (158-301)||(1346955-1347096)
chr6 (158-301)||(1354758-1354899)
chr6 (158-246)||(32728212-32728300)
chr6 (191-285)||(13628273-13628368)
chr6 (158-240)||(2166474-2166556)
chr6 (158-240)||(2178107-2178189)
chr6 (157-234)||(8409233-8409310)
chr6 (158-221)||(13905060-13905123)
chr6 (167-241)||(14553511-14553585)
chr6 (159-221)||(17432332-17432394)
chr6 (158-211)||(9161114-9161167)
chr6 (158-242)||(3815137-3815221)
chr6 (168-240)||(6024234-6024306)
chr6 (158-214)||(14975168-14975224)
chr6 (166-221)||(17448323-17448378)
chr6 (166-221)||(24097580-24097635)
chr6 (171-221)||(4136598-4136648)
chr6 (158-244)||(20400658-20400744)
chr6 (158-212)||(27855528-27855582)
chr6 (158-211)||(22967162-22967215)
chr6 (158-211)||(23821178-23821231)
[»] scaffold0057 (2 HSPs)
scaffold0057 (168-301)||(46832-46965)
scaffold0057 (158-285)||(24789-24911)
[»] scaffold0187 (2 HSPs)
scaffold0187 (158-257)||(10095-10192)
scaffold0187 (158-257)||(20423-20520)
[»] scaffold0311 (1 HSPs)
scaffold0311 (158-285)||(10801-10928)
[»] scaffold0258 (1 HSPs)
scaffold0258 (158-301)||(13025-13167)
[»] scaffold0254 (1 HSPs)
scaffold0254 (158-240)||(4148-4230)
[»] scaffold0168 (1 HSPs)
scaffold0168 (158-301)||(30570-30711)
[»] scaffold0223 (1 HSPs)
scaffold0223 (158-210)||(11122-11174)
[»] scaffold0036 (1 HSPs)
scaffold0036 (158-242)||(35077-35162)
[»] scaffold1176 (1 HSPs)
scaffold1176 (158-210)||(1677-1729)
[»] scaffold0167 (1 HSPs)
scaffold0167 (158-262)||(23590-23694)
[»] scaffold0031 (1 HSPs)
scaffold0031 (166-211)||(43128-43173)


Alignment Details
Target: chr2 (Bit Score: 594; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 594; E-Value: 0
Query Start/End: Original strand, 1 - 720
Target Start/End: Complemental strand, 12315952 - 12315234
Alignment:
Q  1 cttttgccttatgaaggtgaactagttgatgaccctttttgttggaatgcttatggaagacaagagactttgactattcctccacttgattgtttaaggg 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12315952 cttttgccttatgaaggtgaattagttgatgaccctttttgttggaatgcttatggaagacaagagactttgactattcctccacttgattgtttaaggg 12315853  T
Q  101 aaggtgagcctgaaactgttgtggagttatctgaatatgaatgcaataattaagggaatgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttc 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||    
T  12315852 aaggtcagcctgaaactgttgtggagttatctgaatatgaatgcaataattaagggaatttgatcgaaaggtcacgagttcaagtcatggaaacagcttc 12315753  T
Q  201 ttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagtaaatcgggttgccct 300  Q
    || | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||  ||||| |||||||    
T  12315752 ttat-taaaaaacagggtaagactgtgtacaatacaccaaatagtgagactccttcctagactatacgtatgcgagagttttagtgtatcggattgccct 12315654  T
Q  301 taattaagacagcattgctttaaattgtggttgctaatatagggaaggtatatcttatagtactacatgtatagagacattataatttattgtgttagtg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12315653 taattaagacagcattgctttaaattgtggttgctaatatagggaaggtatatcttatagtactacatgtatagagacattataatttattgtgttagtg 12315554  T
Q  401 ggaattgttgtattgtgtatgttacttaggatttcgtccctattgggggtattattagtcccgtattgtgtgatgatttataagatatagataagtctat 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12315553 ggaattgttgtattgtgtatgttacttaggatttcgtccctattgggggtattattagtcccgtattgtgtgatgatttataagatatagataagtctat 12315454  T
Q  501 tttttgggacttatattgtaatagcttgattggatttttatatatatcaggtttcaattatcaactcgtgtatcattgcaagcatgnnnnnnnggttgat 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  12315453 tttttgggacttatattgtaatagcttgattggatttttatatatatcaggtttcaattatcaactcgtgtatcattgcaagcatgtttttttggttgat 12315354  T
Q  601 ttcattatgnnnnnnnggtagataagcatgtttaatattaattcatgtttaaacatcttttaaatgctttttgagtttgaatatctttcctatcttggac 700  Q
    || ||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12315353 ttgattatgtttttttggtagataagcatgtttaatattaatttatgtttaaacatcttttaaatgctttttgagtccgaatatctttcctatcttggac 12315254  T
Q  701 tatgacattatcccctcatc 720  Q
    ||||||| ||||||||||||    
T  12315253 tatgacactatcccctcatc 12315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 8455460 - 8455317
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  8455460 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 8455361  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||||||||| |||| ||||||  | ||||||||||||    
T  8455360 cggaccctgcgtatgccggagctttagtgcaccgggttgccctt 8455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 10543689 - 10543834
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| |||| || |||||||||||||||||||||||  || |||||||| |||  |||| ||| ||| ||||    
T  10543689 atgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggacccctt 10543788  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  10543789 cccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 10543834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 10546153 - 10546297
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa-aacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||| ||||| |||||||||||  || |||||||| ||||||| ||| ||| |||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 10546252  T
Q  257 ctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    |  |||  |||||||||||||| ||||||  | ||||||||||||    
T  10546253 ccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 10546297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 14444719 - 14444846
Alignment:
Q  157 aatgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    |||||||| | ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||  ||||||| ||| ||||||| ||| ||| |||||    
T  14444719 aatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgtgtacgatacaccaaatggtgggaccccttc 14444817  T
Q  257 ctagactatgcgtatgcgggagttttagt 285  Q
    |  |||  |||||||||||||| ||||||    
T  14444818 ccggaccctgcgtatgcgggagctttagt 14444846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 32781424 - 32781312
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    |||||||||||||||||||||  | ||||| | |||||||||||||||||||||||| || |||||||| ||||||| ||| ||| |||||| ||||  |    
T  32781424 gaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagaccct 32781325  T
Q  266 gcgtatgcgggag 278  Q
    | |||||||||||    
T  32781324 gtgtatgcgggag 32781312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 14530309 - 14530454
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||  |  |||||||| ||||  ||| ||| ||| ||||    
T  14530309 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggacccctt 14530408  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  14530409 cccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 14530454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 21779403 - 21779262
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| | ||||| ||||||||  ||||||||||||| ||| |||||||| ||||||| ||| ||| ||||||    
T  21779403 atgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgt--aaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcc 21779306  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  21779305 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 21779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 39914450 - 39914307
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| | ||||||||| | |||||| ||| ||||| | |||||||||||||| |||||||||  ||||||||||| ||| ||| ||| ||| |||||    
T  39914450 atgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacaccgaatggtgggaccccttc 39914351  T
Q  257 ctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    || |||  |||||||||||||| ||||||  ||||||||||||||    
T  39914350 ct-gaccctgcgtatgcgggagctttagtgcatcgggttgccctt 39914307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 11514427 - 11514553
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||| ||||| ||||||| ||||||||||||||||  |||||  || |||||||| ||||||| ||| ||| ||||||    
T  11514427 atgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaaatggtgggac-ccttcc 11514525  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
     ||||  |||||||||||||| ||||||    
T  11514526 cagaccctgcgtatgcgggagctttagt 11514553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 24200769 - 24200686
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| |||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| ||||||    
T  24200769 atgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 24200686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 31158585 - 31158455
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactcctt 255  Q
    ||||||| ||||||||| | ||| ||||| | |||||||| ||||| |||||||||||||||||||||  ||||||| |||  |||| ||| ||| ||||    
T  31158585 atgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaatggtgggacccctt 31158486  T
Q  256 cctagactatgcgtatgcgggagttttagta 286  Q
    || ||||  |||||||||||||| |||||||    
T  31158485 cccagaccctgcgtatgcgggagctttagta 31158455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 19614983 - 19615065
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||| |||||||||||  ||||| | |||||| ||||||||||||||||| || ||||||||||||||    
T  19614983 atgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaa 19615065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 166 - 301
Target Start/End: Original strand, 9671180 - 9671313
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    |||| |||||| |||||| ||||| ||||||| ||||||||||||  |||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |    
T  9671180 gaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccct 9671277  T
Q  266 gcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||||||||||||| ||||||  | ||||||||||||    
T  9671278 gcgtatgcgggagctttagtgcaccgggttgccctt 9671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 12024062 - 12023979
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||  || |||||||| |||||||    
T  12024062 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggctgcgtacaatacaccaaat 12023979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 17896250 - 17896394
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt-aaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    |||||||||||||||||||  ||||||||||  ||||| | |||||||| |||||| ||||||||  || |||||||||||||||| ||| ||| |||||    
T  17896250 atgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatataccaaatggtgggaccccttc 17896349  T
Q  257 ctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
       |||  |||||||| ||||| ||||||  |||| |||||||||    
T  17896350 tcggaccctgcgtatgtgggagctttagtgcatcgagttgccctt 17896394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 19977858 - 19977774
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||||||||||||||| |||||||| ||| ||||||| |||| ||||||||| ||| |||| ||| |||||||| |||||||    
T  19977858 atgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaat 19977774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 29420030 - 29419970
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    |||| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  29420030 tgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 29419970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 31821485 - 31821403
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||||||||||||||| |  |||||||  | ||||||||||| |||||||| |||||||||||| |||||||    
T  31821485 atgtgactgaaaggtcacgagttcaagtcgtagaaacagc--cgtgtgtaaaaaatagggtaaggttgtgtacaatacaccaaat 31821403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 17380380 - 17380297
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||||||||||||||| ||||||||| || ||||| | |||||||| | |||||||||||| |||||| ||||| |||||||    
T  17380380 atgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-ataaacagggtaaggttgtgtgcaatacaccaaat 17380297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 23145840 - 23145760
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||| ||||||||||| ||||||||| |||||||||  ||||||||||||||||| |||||  || |||||||| |||||    
T  23145840 gtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaa 23145760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 23557630 - 23557550
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||| ||||||||||| ||||||||| |||||||||  ||||||||||||||||| |||||  || |||||||| |||||    
T  23557630 gtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaa 23557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 21377217 - 21377118
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||| ||||||||||||| |  ||||| | |||||||||||||||||||||||  || |||||||  ||||||| ||| ||| ||||||    
T  21377217 atgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaatgcaccaaatggtgggaccccttcc 21377118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 25641493 - 25641591
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| | ||||||  ||||||||||||  ||| |||||||| ||||||| ||| ||| ||||||    
T  25641493 atgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgt-gaaaacagggtaaagttgcgtacaatacaccaaattgtgggaccccttcc 25641591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 17667993 - 17668077
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| | ||||||||| |||||||||||| ||| | | ||||||||||||| |||||||||  || |||||||| |||||||    
T  17667993 atgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaat 17668077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 17705496 - 17705567
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca 239  Q
    ||||||||| |||||||||||| |||| || ||||||||||| ||||| |||||  ||||||||||| ||||    
T  17705496 aaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctgtgtacaatacacca 17705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 17623565 - 17623639
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||||| |||||||||||  ||||| | ||||||||||||| |||||||||  || |||||||| |||||||    
T  17623565 aaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaat 17623639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 36871509 - 36871625
Alignment:
Q  183 agtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagtttt 282  Q
    ||||||| ||||||| |||||||| |||| |||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |||||||||||||| |||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggac-ctgcgtatgcgggagcttt 36871606  T
Q  283 agtaaatcgggttgccctt 301  Q
    |||  | ||||||||||||    
T  36871607 agtgcaccgggttgccctt 36871625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 40417015 - 40416933
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||| ||||||||| || ||||| | |||||| |||||||||||| |||  ||||||||||| |||||    
T  40417015 atgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaa 40416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 40762345 - 40762235
Alignment:
Q  191 aaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagtaaatc 290  Q
    ||||||| ||||||||||||||| |||||||  |  |||||||| ||||||| ||| ||| | ||||| |||  |||||||| ||||| ||||||  | |    
T  40762345 aaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcacc 40762246  T
Q  291 gggttgccctt 301  Q
    |||||||||||    
T  40762245 gggttgccctt 40762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 5450276 - 5450377
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt-aaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| ||||||||||| |||||| ||||| ||||| | |||||||| |||||||| ||||||  || |||||||| ||||||  ||| ||| |||||    
T  5450276 atgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacaccaaagggtgggaccccttc 5450375  T
Q  257 ct 258  Q
    ||    
T  5450376 ct 5450377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 44643513 - 44643634
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| ||||||||||| |||||||| ||  ||| ||| ||||  |||||||| ||| |||||  || ||||||| |||||||| ||| ||| |||||    
T  44643513 atgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagtaaggctgcgtacaatgtaccaaatggtgggaccccttc 44643612  T
Q  257 ctagactatgcgtatgcgggag 278  Q
    | ||||  ||||||||||||||    
T  44643613 ccagaccctgcgtatgcgggag 44643634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 5841019 - 5841095
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    ||||||| | ||||||||| |||||||||||  ||||||| | |||||||||||| ||||||||  || ||||||||    
T  5841019 atgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaata 5841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 7214525 - 7214601
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    ||||||| ||||||||| | ||||||||| || ||||||  |||||||||||| ||||||||||  || ||||||||    
T  7214525 atgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaata 7214601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 17471572 - 17471668
Alignment:
Q  191 aaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatatacc-aaatagtgagactccttcctagactatgcgtatgcgggagttttagt 285  Q
    ||||||| |||||||||||||| |||| ||||| || |||||||||||| ||||  |||||| ||||||  |||  ||| |||||||||||||||||    
T  17471572 aaacagcctcttgtgtaaaaaaacaggataagactgcgtacaatataccaaaatgatgagaccccttccctgaccctgcctatgcgggagttttagt 17471668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 23397757 - 23397809
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa 210  Q
    ||||||| ||||||||| | |||||||||||| ||||||| ||||||||||||    
T  23397757 atgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaa 23397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 15296531 - 15296468
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    |||||||||| | ||||||| | |||||||||| ||||||||||  || |||||||||||||||    
T  15296531 gttcaagtcccggaaacagcctgttgtgtaaaatacagggtaaggctgcgtacaatataccaaa 15296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 25249881 - 25249739
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| ||||||||| || ||||||  ||||||||| ||| |||||||||  || |||||||| ||||||| ||| ||  ||||||    
T  25249881 atgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaa-cagggtaaggctgcgtacaatacaccaaatggtgggatcccttcc 25249783  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
       ||  |||||||||| ||| ||||||  | ||||||||||||    
T  25249782 cgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctt 25249739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 33795284 - 33795339
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||||| |||||||||| | ||||| | ||||| |||||||||||||||||    
T  33795284 gaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaag 33795339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 99405 - 99282
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttccta 259  Q
    ||||| ||||||||||| |||||||||||  ||||||| |||  ||||||||||| || |||  || |||||||| ||||||| |||  || |||||  |    
T  99405 gtgactgaaaggtcacgggttcaagtcctagaaacagcctct--tgtaaaaaacatggcaaggctgcgtacaatacaccaaatggtggaaccccttctca 99308  T
Q  260 gactatgcgtatgcgggagttttagt 285  Q
    |||  || ||||||||||| ||||||    
T  99307 gaccctgtgtatgcgggagctttagt 99282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 22371059 - 22371144
Alignment:
Q  169 aggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    |||||||| |||||||||||| ||||||| || |||   ||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  22371059 aggtcacgggttcaagtcctggaaacagcctcgtgt---aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 22371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 58968 - 59113
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||| || |||||||| |||  |||| ||| ||| ||||    
T  58968 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggacccctt 59067  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    || ||||| |||||||||||||| ||||||  ||||||||||||||    
T  59068 cccagactctgcgtatgcgggagctttagtgcatcgggttgccctt 59113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 9e-29; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 12914180 - 12914059
Alignment:
Q  157 aatgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||   | |||||||| ||||||| ||||||| |||||    
T  12914180 aatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaatggtgagaccccttc 12914081  T
Q  257 ctagactatgcgtatgcgggag 278  Q
    | ||||  ||| ||||||||||    
T  12914080 ccagaccctgcatatgcgggag 12914059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 8247833 - 8247706
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||| ||||  ||| ||| ||||||||    
T  8247833 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactcctt 8247734  T
Q  256 cctagactatgcgtatgcgggagtttta 283  Q
    ||  |||  |||||||||||||| ||||    
T  8247733 cccggaccctgcgtatgcgggagcttta 8247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 40272956 - 40272813
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||| | |||||||||||| ||||| | |||||||||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  40272956 atgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 40272857  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  |||||||||||||| ||||||  | ||||||||||||    
T  40272856 cggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 40272813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 13628936 - 13628791
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  13628936 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggacccctt 13628837  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  13628836 cccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 13628791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 7943003 - 7943130
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | |||||||||  ||||||||||| ||||||| |||||| ||||||||||||||||| || |||||||| | ||||| ||| ||  |||| |    
T  7943003 atgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaatggtgggatccctttc 7943102  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
     |||| ||||||||||||||| ||||||    
T  7943103 cagaccatgcgtatgcgggagctttagt 7943130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 13730748 - 13730666
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||| |||||    
T  13730748 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaa 13730666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 30928291 - 30928209
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||| ||||||| |||| |||||    
T  30928291 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaa 30928209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 516422 - 516568
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc---aaatagtgagactcct 254  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || | |||||| |||   |||| | | ||| |||    
T  516422 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggacccct 516521  T
Q  255 tcctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    |||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  516522 tccccgaccctgcgtatgcgggagctttagtgcaccgggttgccctt 516568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 39203529 - 39203670
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||  ||||||| ||||||||||||  ||||||||| ||| |||||||| ||||||| ||| ||| ||||||    
T  39203529 atgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcc 39203626  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| ||||||  | ||||||||||||    
T  39203627 cggaccttgcatatgcgggagctttagtgcaccgggttgccctt 39203670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 46421181 - 46421054
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    |||||||  |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  46421181 atgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccctt 46421082  T
Q  256 cctagactatgcgtatgcgggagtttta 283  Q
    ||  |||  |||||||||||||| ||||    
T  46421081 cccggaccctgcgtatgcgggagcttta 46421054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 26869720 - 26869862
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||||| ||| |||| ||||||||||||||  || |||||||| ||||||| ||| ||| |||| |    
T  26869720 atgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttgc 26869818  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      ||| ||||||||||||||| ||| ||  | ||||||||||||    
T  26869819 cggaccatgcgtatgcgggagctttggtgcaccgggttgccctt 26869862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 34420786 - 34420660
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttcct 258  Q
    ||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||| ||| ||| |||| ||| ||| ||||||     
T  34420786 gtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaatggtgggaccccttccc 34420687  T
Q  259 agactatgcgtatgcgggagttttagt 285  Q
     |||  |||||||| ||||| ||||||    
T  34420686 ggaccttgcgtatgtgggagctttagt 34420660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 26573142 - 26573267
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttccta 259  Q
    ||||| ||||||||||| |||||||||||| ||||||| || ||||||||||||||||||||  || |||||||| ||||| | ||| ||| || |||      
T  26573142 gtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgggaccccatcccg 26573241  T
Q  260 gactatgcgtatgcgggagttttagt 285  Q
    |||  |||||||||| ||| ||||||    
T  26573242 gaccctgcgtatgcgtgagctttagt 26573267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 4495808 - 4495724
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| | ||||||||| |||||||||||||||| ||| | |||||||||||||||||||||  || |||||||| |||||||    
T  4495808 atgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacaccaaat 4495724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 22609779 - 22609922
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||| ||| ||||||||| || ||||||| |||||||||||| ||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  22609779 atgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 22609877  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctta 302  Q
      |||  |||||||||||||| || |||  | |||||||||||||    
T  22609878 cggaccttgcgtatgcgggagcttcagtgcaccgggttgccctta 22609922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 29366866 - 29366784
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    |||||||  |||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||  || |||||||| |||||    
T  29366866 atgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaa 29366784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 166 - 301
Target Start/End: Original strand, 1217111 - 1217244
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| | | ||| ||||||  |||  |    
T  1217111 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccggaccct 1217208  T
Q  266 gcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    || |||||||||| | ||||  | ||||||||||||    
T  1217209 gcatatgcgggagctctagtgcaccgggttgccctt 1217244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 169 - 285
Target Start/End: Complemental strand, 6411954 - 6411839
Alignment:
Q  169 aggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcg 268  Q
    |||||| | ||||||||| || ||||||| ||||||||||||| |||||||||  || |||||||| |||||||  || ||| |||||| ||||  ||||    
T  6411954 aggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccagaccttgcg 6411856  T
Q  269 tatgcgggagttttagt 285  Q
    |||||||||| ||||||    
T  6411855 tatgcgggagctttagt 6411839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 10795554 - 10795447
Alignment:
Q  173 cacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactccttcctagactatgcgta 270  Q
    |||| |||||||||||| ||||||| |||||||||||| ||||||||||  || |||||||| |||  |||| ||| ||| ||||||| |||  ||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgta 10795455  T
Q  271 tgcgggag 278  Q
    ||||||||    
T  10795454 tgcgggag 10795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 178 - 301
Target Start/End: Original strand, 31592882 - 31593003
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcggga 277  Q
    |||||||||||| ||||||| ||||||||||||  |||||||||  || |||||||| ||||||| ||| ||||||||||  |||  ||| |||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcggga 31592979  T
Q  278 gttttagtaaatcgggttgccctt 301  Q
    | | ||||  | ||||||||||||    
T  31592980 gctctagtgcaccgggttgccctt 31593003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 33926096 - 33926223
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca-aatagtgagactccttc 256  Q
    ||||||| ||||||||| | |||||||||||| ||| ||| |||||||| ||||||||||||||  ||||||||||| |||| ||| ||| ||| |||||    
T  33926096 atgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgt-aaaaacagggtaaggctgtgtacaatacaccataatggtgggaccccttc 33926194  T
Q  257 ctagactatgcgtatgcgggagttttagt 285  Q
    || |||  ||| |||||| ||| ||||||    
T  33926195 ctggaccctgcatatgcgagagctttagt 33926223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 10870095 - 10870033
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||    
T  10870095 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaag 10870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 35417929 - 35417988
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacaggg 217  Q
    ||||||| || ||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  35417929 atgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 54032703 - 54032640
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| | ||||||||| |||||||||||| ||||| | |||||||||||||||||||||||    
T  54032703 atgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 54032640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 14986990 - 14987052
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| |||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 14987052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 22123059 - 22122917
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| |||||||| || |||||||||||| ||||||  ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  22123059 atgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 22122962  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctta 302  Q
      |||  ||| |||||| ||| | ||||  | |||||||||||||    
T  22122961 cggaccctgcatatgcgagagctctagtgcaccgggttgccctta 22122917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 45620971 - 45620890
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaa-aaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||| ||||||||||| |||||||| ||| ||||||| |||||||||| |||||||||||||  || |||||||| |||||    
T  45620971 gtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 53062051 - 53062112
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggta 219  Q
    ||||||| ||||||||||| |||||||||||| ||||||| || ||||| ||||||||||||    
T  53062051 atgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 285
Target Start/End: Complemental strand, 53996707 - 53996582
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttccta 259  Q
    |||| ||||||||||| ||||||||| || ||||| | |||||||||||||||||||||||  ||  ||||||| ||| |||| ||| ||| ||||||      
T  53996707 tgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaaaatggtgggaccccttccct 53996608  T
Q  260 gactatgcgtatgcgggagttttagt 285  Q
    |||  |||||||| ||||| ||||||    
T  53996607 gacactgcgtatgtgggagctttagt 53996582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 54484730 - 54484847
Alignment:
Q  185 tcctgaaaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagtttta 283  Q
    ||||| ||||||| |||||||||||||| || ||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |||||||||||||| ||||    
T  54484730 tcctggaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 54484829  T
Q  284 gtaaatcgggttgccctt 301  Q
    ||  | ||||||||||||    
T  54484830 gtgcaccgggttgccctt 54484847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 9607216 - 9607279
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| |||||||||   |||||||||||| ||||||| ||||| |||||||||||||||||    
T  9607216 atgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaag 9607279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 19731023 - 19731142
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    |||||||||||  | ||||||||| ||| ||| |||||||||||||||| |||||| ||| |||||||| ||| | | ||| ||| | |||| ||||| |    
T  19731023 gaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacctattggtgggaccctttcccagactct 19731122  T
Q  266 gcgtatgcgggagttttagt 285  Q
    | |||||| |||| ||||||    
T  19731123 gtgtatgcaggagctttagt 19731142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 55401209 - 55401272
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||| || ||| |||| ||||||    
T  55401209 gttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaa 55401272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 5173864 - 5173811
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||||||||||    
T  5173864 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 5173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 7697029 - 7696947
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    |||||||  |||||||||| |||||||||||| ||||||  ||||||||  |||||||||||||  || |||||||| |||||||    
T  7697029 atgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaat 7696947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 33235552 - 33235621
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa-aacagggtaagattgtgtacaata 234  Q
    |||||||||| ||||||| || || ||| ||| |||||||||||| |||||||||||| |||||||||||    
T  33235552 gaaaggtcacaagttcaaatcgtgtaaagagcctcttgtgtaaaaaaacagggtaagactgtgtacaata 33235621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 285
Target Start/End: Complemental strand, 45948972 - 45948855
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| |||||| ||||| ||||| | |||||||||||||| ||||||||  ||  ||||||| ||||| | ||| ||| |||||   |||  |||    
T  45948972 aaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgc 45948873  T
Q  268 gtatgcgggagttttagt 285  Q
    ||||||||||| ||||||    
T  45948872 gtatgcgggagctttagt 45948855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 52428614 - 52428533
Alignment:
Q  166 gaaaggtcacgagttcaagtc-ctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtg 246  Q
    ||||||||||| ||| ||||| ||| || |||| |||||||||||| ||||||||||  || |||||||| |||||||||||    
T  52428614 gaaaggtcacgggtttaagtctctggaagcagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatagtg 52428533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 12525423 - 12525483
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    |||| ||||||||||  |||| ||||||| ||||||| ||||||||||||| |||||||||    
T  12525423 tgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaag 12525483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 39212003 - 39212079
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    ||||||| |||| |||||| |||||||||||| ||| | | ||||||||||| |||| ||||||| || ||||||||    
T  39212003 atgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaata 39212079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 1121361 - 1121286
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||||||| ||| |||||||| ||||| |||||||||||| ||| | ||| ||| || |||||||| ||||||    
T  1121361 gaaaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacaccaaa 1121286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 45139622 - 45139559
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| ||||||||  || ||||| | |||||||||||| ||||||||||    
T  45139622 atgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaag 45139559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 45786328 - 45786277
Alignment:
Q  190 aaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    |||||||| |||||||||||||||||||||||  || |||||||| ||||||    
T  45786328 aaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 45786277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 54374488 - 54374362
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttcct 258  Q
    ||||| ||||||||||  ||||||||| || ||||| | |||||||||||||| ||||||||  || |||||||  ||| |||| ||| ||| ||||||     
T  54374488 gtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttccc 54374389  T
Q  259 agactatgcgtatgcgggagttttagt 285  Q
     |||  ||| |||||||||| ||||||    
T  54374388 ggaccctgcatatgcgggagctttagt 54374362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 16735454 - 16735570
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | || |||||| |||||||||||  ||||||| ||||||  |||| ||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  16735454 atgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 16735552  T
Q  258 tagactatgcgtatgcgg 275  Q
      |||  |||||||||||    
T  16735553 cggacactgcgtatgcgg 16735570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 25944484 - 25944565
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| ||||||||| | |||||||||||| |||| || ||| ||||||||||| ||| |||  || |||||||| ||||||    
T  25944484 gtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaatacaccaaa 25944565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 43114995 - 43114950
Alignment:
Q  177 agttcaagtcctgaaaacagcttcttgtgtaa-aaaacagggtaag 221  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||    
T  43114995 agttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaag 43114950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 49013586 - 49013537
Alignment:
Q  191 aaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| |||||||||||||||||||||||  || |||||||| |||||    
T  49013586 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 49013537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 52926354 - 52926305
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgta 207  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||    
T  52926354 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 28817770 - 28817627
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| ||| ||| ||| ||| ||||||    
T  28817770 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacccaatggtgggaccccttcc 28817671  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  |||||||||||||| ||||||  ||||||||||||||    
T  28817670 cggaccctgcgtatgcgggagctttagtgcatcgggttgccctt 28817627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 35261670 - 35261813
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| ||||||| |||| ||||||  ||||||||||||||||||||||| ||| |||||||| ||||||| ||| ||| ||||||    
T  35261670 atgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcc 35261769  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    | |||  |||||||||||||| ||||||  | ||||||||||||    
T  35261770 tggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 35261813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 36720787 - 36720914
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  36720787 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 36720886  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
      |||  ||||||||||| || ||||||    
T  36720887 cggaccctgcgtatgcggaagctttagt 36720914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 166 - 301
Target Start/End: Complemental strand, 39461132 - 39460995
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactccttcctagact 263  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||  || |||||||| ||||  ||| ||||||| ||||||  |||     
T  39461132 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggacc 39461033  T
Q  264 atgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
     |||||||||||||| ||||||  | ||||||||||||    
T  39461032 ctgcgtatgcgggagctttagtgcaccgggttgccctt 39460995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 2626510 - 2626633
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt---aaaaaacagggtaagattgtgtacaatataccaaatagtgagactcct 254  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||   |||||||||||||||| || |||||||| |||||||  || ||| |||    
T  2626510 atgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaatgatgggacccct 2626609  T
Q  255 tcctagactatgcgtatgcgggag 278  Q
    ||| ||||  ||| ||||||||||    
T  2626610 tcccagaccctgcatatgcgggag 2626633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 285
Target Start/End: Original strand, 44530150 - 44530267
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| ||||||||| || ||||| | |||||||||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||| |||  |||    
T  44530150 aaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgc 44530249  T
Q  268 gtatgcgggagttttagt 285  Q
    ||||||||||| ||||||    
T  44530250 gtatgcgggagctttagt 44530267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 29521828 - 29521702
Alignment:
Q  159 tgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcct 258  Q
    |||||| | ||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||  || |||||||| ||||||| ||| ||  || |||     
T  29521828 tgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaacccatccc 29521729  T
Q  259 agactatgcgtatgcgggagttttagt 285  Q
    ||||  |||||||||||||| ||||||    
T  29521728 agaccctgcgtatgcgggagctttagt 29521702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 17823567 - 17823651
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||| ||||| || ||| |||| |||||||    
T  17823567 atgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaaat 17823651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 18164903 - 18164821
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||| ||||||    
T  18164903 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggttgcgtacaatacaccaaa 18164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 302
Target Start/End: Original strand, 45071266 - 45071399
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| |||||||| ||| ||||||| |||||||||||| ||||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |||    
T  45071266 aaggtcacgggttcaagttctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgc 45071364  T
Q  268 gtatgcgggagttttagtaaatcgggttgccctta 302  Q
    ||||||||||| || |||  | |||||||||||||    
T  45071365 gtatgcgggagcttcagtgcaccgggttgccctta 45071399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 5135418 - 5135313
Alignment:
Q  173 cacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatg 272  Q
    |||| |||||||||||| ||||||| |||||||||||||| ||||||||  ||||||||||| ||||||| ||| ||| ||||||  |||  ||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatg 5135319  T
Q  273 cgggag 278  Q
    | ||||    
T  5135318 caggag 5135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 12670392 - 12670274
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  12670392 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 12670295  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||| ||||||||||    
T  12670294 cggaccctgcatatgcgggag 12670274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 13160693 - 13160812
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||  ||||||| |||||||| ||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  13160693 atgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 13160791  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||||||||||||||    
T  13160792 cggaccctgcgtatgcgggag 13160812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 22598151 - 22598267
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctag 260  Q
    |||| ||||||||||| |||||| ||||| ||||| | |||||||||||||||||||||||  | ||||||||| ||||| | ||||||| | ||||  |    
T  22598151 tgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacaccaattggtgagaccctttcccgg 22598250  T
Q  261 actatgcgtatgcggga 277  Q
    ||  |||||||||||||    
T  22598251 accttgcgtatgcggga 22598267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 20869640 - 20869560
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  ||||||||||| |||||    
T  20869640 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgtgtacaatacaccaa 20869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 6760823 - 6760876
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  6760823 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 6760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 301
Target Start/End: Original strand, 12625891 - 12626024
Alignment:
Q  169 aggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa-aacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    |||||||| | |||||||||| ||||| | |||||||||||| |||||||||||| ||  ||||||| ||||||| ||| ||| || |||  |||  |||    
T  12625891 aggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaatggtgggaccccctcccggaccctgc 12625990  T
Q  268 gtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||||||||||| ||||||  | ||||||||||||    
T  12625991 gtatgcgggagctttagtgcaccgggttgccctt 12626024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 20284217 - 20284086
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt--aaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcc 253  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| |  |||||| ||||||||  || |||||||| ||||  ||| ||| ||| ||    
T  20284217 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggacccc 20284118  T
Q  254 ttcctagactatgcgtatgcgggagttttagt 285  Q
    ||||  |||  |||||||||||||||||||||    
T  20284117 ttcccggaccctgcgtatgcgggagttttagt 20284086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 44781648 - 44781567
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| ||||| ||||| |||||||||||| ||||| | |||||||||||| ||||||||||  ||||||||||| ||||||    
T  44781648 gtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaa 44781567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 30454239 - 30454098
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||||| ||||||  || |||| ||| ||||||| ||| ||| ||||||    
T  30454239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacaaggtaaggctgcgtacgatacaccaaatggtgggaccccttcc 30454142  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  30454141 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 30454098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 389642 - 389720
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt--aaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||||||| |||||||||||| ||||| | ||||||||  ||||||||||||||| ||| |||||||| |||||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaat 389720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 21070846 - 21070714
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaaca---gggtaagattgtgtacaatataccaa--atagtgagactc 252  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||||| |   |||||||  || |||||||| |||||  || ||| ||| |    
T  21070846 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccc 21070747  T
Q  253 cttcctagactatgcgtatgcgggagttttagt 285  Q
    |||||  |||  |||||||||||||||||||||    
T  21070746 cttcccggaccctgcgtatgcgggagttttagt 21070714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 36918123 - 36918202
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagt 245  Q
    ||||||||||  |||||||| ||| |||||  ||||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  36918123 gaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaaatagt 36918202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 8484062 - 8483956
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcggga 277  Q
    |||||||||||| ||||| | ||||||||||||||||||| |||  || |||||||| ||||| | ||| ||| || ||| ||||  |||||||||||||    
T  8484062 gttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgcggga 8483963  T
Q  278 gttttag 284  Q
    | |||||    
T  8483962 gctttag 8483956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 29877111 - 29877205
Alignment:
Q  184 gtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggag 278  Q
    |||||| ||||||| | |||||||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  ||||||||||||||    
T  29877111 gtcctggaaacagccttttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggag 29877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 26954133 - 26954206
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgt-aaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||||| |||||||||||| ||||||| |||||||| |||||||||||||||  || |||||||| |||||    
T  26954133 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaa 26954206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 30962909 - 30962857
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggt 218  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||| |||||    
T  30962909 gaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggt 30962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 11748290 - 11748369
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatac 237  Q
    ||||||| |||| |||||| ||||||||| || ||||||| |||| |||||||| ||||||||||  | |||||||||||    
T  11748290 atgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaagacagcgtacaatatac 11748369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 28407407 - 28407469
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||    
T  28407407 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaag 28407469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 7136673 - 7136591
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||| | |||||||||||| ||||| | ||||||||||||| |||||||||  || |||||||| |||||    
T  7136673 atgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaa 7136591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 8897908 - 8897783
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| ||| |||||||| ||||| |  ||||||||||||| ||||||||  |  |||||||| ||||||| ||| ||| ||||||    
T  8897908 atgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttcc 8897809  T
Q  258 tagactatgcgtatgcgggagtttta 283  Q
      |||  ||| |||||||||| ||||    
T  8897808 cggaccctgcatatgcgggagcttta 8897783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 42083841 - 42083760
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| ||||||||||| |||||||||||| ||||||| | ||||||||||||  ||| |||  || ||||| |||||||||    
T  42083841 gtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtacagtataccaaa 42083760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 14018105 - 14018037
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    ||||||||| | ||||||||| || ||||||  |||||||||||||||||||| ||| || ||||||||    
T  14018105 gaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgagactgcgtacaata 14018037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 5689642 - 5689749
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcggga 277  Q
    ||||||||| || ||| ||| ||||||||||||| |||||||||  || |||||||| ||||||| |||  || ||||||   || ||||||||| ||||    
T  5689642 gttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatgtggga 5689741  T
Q  278 gttttagt 285  Q
    | ||||||    
T  5689742 gctttagt 5689749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 25250513 - 25250595
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||  |||||||||||| ||||||| | |||||||||||| |||||| |  || |||||||| |||||    
T  25250513 atgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaa 25250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 24365204 - 24365083
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    |||||||  ||| |||||| ||||||| |||  ||||||| |||||||||||||| |||||||||  || | |||||| ||||||| ||| ||| |||||    
T  24365204 atgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaatggtgggaccccttc 24365105  T
Q  257 ctagactatgcgtatgcgggag 278  Q
    |  |||  |||||||| |||||    
T  24365104 ccggaccctgcgtatgtgggag 24365083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 31457172 - 31457217
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||||    
T  31457172 gaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaa 31457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 35105922 - 35105995
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca 239  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||| | || |||||  || |||||||| ||||    
T  35105922 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacacca 35105995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 44742653 - 44742580
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| |||||||||| ||| |||||   || ||||||||||||||||||||  || |||||||| ||||||    
T  44742653 aaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 44742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 46248097 - 46247954
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| |||| |||||| ||||||||| || ||||||| |||||||||||||||||||||||| || |||||||| ||||||| ||| ||| ||||||    
T  46248097 atgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 46247998  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  |||||||||||||| ||||||  | ||||||||||||    
T  46247997 cggaccctgcgtatgcgggagctttagtgtaccgggttgccctt 46247954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 18724689 - 18724605
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||| |||||||    
T  18724689 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaaat 18724605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 14617052 - 14617179
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||| |||||| ||| |||||||| ||||||| ||| ||  ||||||    
T  14617052 atgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacaccaaatggtgggatcccttcc 14617151  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
      |||  ||| |||||||||| ||||||    
T  14617152 cggaccctgcatatgcgggagctttagt 14617179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 23768464 - 23768337
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||  ||||||||| || ||||||| |||||||||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  23768464 atgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggacaccttcc 23768365  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
     ||||  |||||||||||||| ||||||    
T  23768364 cagaccctgcgtatgcgggagctttagt 23768337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 10668239 - 10668384
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||||| ||||  ||| ||| ||| ||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggacccctt 10668338  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  | |  |||||||||||||| ||||||  | ||||||||||||    
T  10668339 cccggtccctgcgtatgcgggagctttagtgcaccgggttgccctt 10668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 46991818 - 46991959
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||| | |||||||||||||||||||||||  ||||||||||| ||| ||| ||| ||| ||||||    
T  46991818 atgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccgaatggtgggaccccttcc 46991917  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccc 299  Q
      |||  |||||||| ||||| ||||||  | ||||||||||    
T  46991918 cggaccctgcgtatgtgggagctttagtgcaccgggttgccc 46991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 301
Target Start/End: Original strand, 35005139 - 35005282
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactccttcc 257  Q
    ||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||  ||  ||||||| |||  |||| ||| ||| ||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcc 35005238  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  |||||||||||| | ||||||  | ||||||||||||    
T  35005239 cggaccctgcgtatgcgggcgctttagtgcaccgggttgccctt 35005282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 18944657 - 18944803
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||  ||||||| |||| ||||||| |||||||||||||||||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  18944657 atgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggacccctt 18944756  T
Q  256 cctagactatgcgtatgcgggag-ttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| |||||||  | ||||||||||||    
T  18944757 cccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctt 18944803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 27201661 - 27201806
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactcctt 255  Q
    ||||||| ||||||||| | |||||||||||| ||||||| |||||||| | ||||||||||||  || |||||||| |||  |||| ||| ||| ||||    
T  27201661 atgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggacccctt 27201760  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  || |||||||||||    
T  27201761 cccggaccttgcgtatgcgggagctttagtgcattgggttgccctt 27201806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 32632697 - 32632581
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctag 260  Q
    |||| ||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||  || |||||||| ||||||| ||| ||| |||||| |     
T  32632697 tgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccaa 32632599  T
Q  261 actatgcgtatgcgggag 278  Q
    ||  ||| ||||||||||    
T  32632598 accctgcatatgcgggag 32632581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 35117910 - 35117829
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| ||||||||||| |||||||||||| ||| ||| |||||||||||| ||||||||||  ||||||||||| ||||||    
T  35117910 gtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaa 35117829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 47214525 - 47214643
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||  |||||| |||||  ||||||||| ||| |||||||| ||||||| ||| ||| ||||||    
T  47214525 atgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtttaaaa--cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcc 47214622  T
Q  258 tagactatgcgtatgcgggag 278  Q
     ||||  ||| ||||||||||    
T  47214623 cagaccctgcatatgcgggag 47214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 4430170 - 4430086
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| | ||||||||| ||| ||||| |||||||||  |||||||||||||||||||||||| || |||||||| |||||||    
T  4430170 atgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaat 4430086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 25468399 - 25468287
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||| | |||||||||||| ||||| | ||||||||||||| ||||||||| ||| |||||||| ||||||| ||  |||  ||||| ||||  |    
T  25468399 gaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatggttggacctcttcccagaccct 25468300  T
Q  266 gcgtatgcgggag 278  Q
    |||||||||||||    
T  25468299 gcgtatgcgggag 25468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 30395862 - 30395790
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| |||||    
T  30395862 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 30395790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 34725240 - 34725099
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| || |||| ||| ||| ||||||    
T  34725240 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacactaaatggtgggaccccttcc 34725143  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  34725142 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 34725099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 20004236 - 20004091
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| | ||||||||| |||||||||||| ||||||| ||| |||||||||||| ||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  20004236 atgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggacccctt 20004137  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    || ||||   || |||||||||| ||||||  | ||||||||||||    
T  20004136 cccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 20004091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 11596527 - 11596646
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| |||| |||||| |||||||||||  ||||| | |||||||||||| ||||||||||  || ||| |||| ||||||| ||| ||| ||||||    
T  11596527 atgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaa-acagggtaaggctgcgtataatacaccaaatggtgggaccccttcc 11596625  T
Q  258 tagactatgcgtatgcgggag 278  Q
    | |||  ||||||||||||||    
T  11596626 tggaccctgcgtatgcgggag 11596646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 22327113 - 22327185
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtac 230  Q
    ||||||| |||||||| || |||||||||||| ||||| | |||||||||||||||||||||||  |||||||    
T  22327113 atgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtac 22327185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 22930211 - 22930113
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||| | |||||||||||| ||||||| | ||||||| ||||||||||||| ||||| |||||| ||||||| ||| ||| ||||||    
T  22930211 atgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgta-aaaacagggtaaggttgtg-acaatacaccaaatggtgggaccccttcc 22930114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 41319950 - 41319866
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||||  ||| |||||||| ||||||  |||||||||||||||||||||||  || |||||||| |||||||    
T  41319950 atgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaat 41319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 6925114 - 6925241
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||| ||| |||||||||||||| ||||||||  || | |||||| ||| ||| ||| ||| ||||||    
T  6925114 atgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaatggtgggaccccttcc 6925213  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
      | |  |||||||||||||| ||||||    
T  6925214 cggtccctgcgtatgcgggagctttagt 6925241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 9939475 - 9939558
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| |||||||||||||||||||||||| ||||| | |||||| ||| ||||| |||||| ||| || ||||| ||||||    
T  9939475 atgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaa 9939558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 27136786 - 27136675
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttcctagactatg 266  Q
    |||| ||||||||||||| |||  |||| | |||||||||||||||| |||||| ||| |||||||| ||| |||| ||| ||| ||||||||||  |||    
T  27136786 aaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcgtacaatacaccaaaatggtgggaccccttcctagatcatg 27136687  T
Q  267 cgtatgcgggag 278  Q
     |||||||||||    
T  27136686 tgtatgcgggag 27136675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 50760370 - 50760307
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  50760370 atgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaag 50760307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 50811955 - 50812037
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt-aaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| |||||||||||   ||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  50811955 gtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgtacaatacaccaaa 50812037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 2435929 - 2435848
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| ||||||||||| |||||||||||| ||||||| || ||||| ||||| ||||||||  || |||||||| ||||||    
T  2435929 gtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacaccaaa 2435848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 12126971 - 12126861
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||| ||| |||| ||| ||||||||||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |    
T  12126971 gaaaggtcacgggtttaagttctggaaacagcttcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaattgtgggaccccttcccggaccct 12126874  T
Q  266 gcgtatgcgggag 278  Q
    || ||||||||||    
T  12126873 gcatatgcgggag 12126861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 17470488 - 17470407
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| ||| ||||| | |||||||||||  ||||||| |||||||||||||||||||||||  || |||||||| ||||||    
T  17470488 gtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 17470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 20036234 - 20036359
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaa-aaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| ||||||||||| |||||||||||| |||||   ||||||||||| | | |||||||||||| || ||||| ||||||| |||  || |||||    
T  20036234 atgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttcaatacaccaaatggtggaaccccttc 20036333  T
Q  257 ctagactatgcgtatgcgggagtttt 282  Q
    |  |||  ||||||||| ||||||||    
T  20036334 ccggaccctgcgtatgcaggagtttt 20036359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 35253329 - 35253211
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||| ||||| |||||||||||  ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 35253232  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||| ||||||||||    
T  35253231 cggaccctgcatatgcgggag 35253211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 38478424 - 38478342
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||||| |||||||||||  ||||||| ||||||||  |||||||||||||  || |||||||| |||||||    
T  38478424 atgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaat 38478342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 4349699 - 4349795
Alignment:
Q  205 gtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    |||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  4349699 gtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 4349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 19701585 - 19701712
Alignment:
Q  159 tgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa-tagtgagactccttcc 257  Q
    |||||| |||| |||||| ||| ||||| |||||||||| |||||||||||||||  ||||||  || |||||||| |||||| | ||| | | ||||||    
T  19701585 tgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaaggatgggtacaatacaccaaaatggtggggccccttcc 19701684  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
      |||  |||||||||||||| ||||||    
T  19701685 cggaccctgcgtatgcgggagctttagt 19701712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 23796507 - 23796606
Alignment:
Q  186 cctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagt 285  Q
    |||| ||||||| ||||||||||||| ||  ||||| ||| |||||||| ||||||| ||||||| |||||| ||||  ||| ||||| |||| ||||||    
T  23796507 cctggaaacagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgctggagctttagt 23796606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 25290177 - 25290242
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaaca--gcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| ||||||||| || |||||  || |||||||||||||||||||||||    
T  25290177 atgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaag 25290242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 23371141 - 23371221
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    |||| ||||||||||| |||||||||||  |||||||  |||| ||||||||| ||| ||| |||||||||||| |||||||    
T  23371141 tgactgaaaggtcacgggttcaagtcctagaaacagccacttgggtaaaaaac-gggcaaggttgtgtacaatacaccaaat 23371221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 45812679 - 45812561
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||||||||||  ||||||||  |||| ||||||||  ||  ||||||| ||||||| ||| ||| ||||||    
T  45812679 atgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgt--aaaagagggtaaggctgcatacaatacaccaaatggtgggaccccttcc 45812582  T
Q  258 tagactatgcgtatgcgggag 278  Q
     | ||  ||| ||||||||||    
T  45812581 caaaccctgcatatgcgggag 45812561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 6983951 - 6983858
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactcctt 255  Q
    ||||| ||||||||||  |||||||||||| ||||||| ||  || ||||||||||||||||  || |||||||| ||||||| ||| ||| ||||    
T  6983951 gtgactgaaaggtcacaggttcaagtcctggaaacagcctc--gtataaaaaacagggtaagtatgcgtacaatacaccaaatggtgggacccctt 6983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 278
Target Start/End: Original strand, 30682848 - 30682946
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcggga 277  Q
    |||||| ||||||||| ||| |||||||| ||||||| ||||||||||||||| ||| | ||||| ||| ||| ||||||  |||  |||||||||||||    
T  30682848 gttcaaatcctgaaaatagcctcttgtgt-aaaaacaaggtaagattgtgtac-atacaacaaatggtgggaccccttcccggaccgtgcgtatgcggga 30682945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 31382330 - 31382215
Alignment:
Q  185 tcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttag 284  Q
    ||||| ||||||| ||||||||||||| |||| ||||  || |||||||| ||||||| ||| ||| ||||||| |||  ||| |||||||||| ||||     
T  31382330 tcctggaaacagcctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgcgggagctttac 31382232  T
Q  285 taaatcgggttgccctt 301  Q
    |  | ||||||||||||    
T  31382231 tgtaccgggttgccctt 31382215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 45264536 - 45264416
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttcctagacta 264  Q
    ||||||||||  |||||||||||| ||||| | ||||||| ||||||||| |||||  ||||| ||||| ||| |||| ||| ||| |||||  ||||      
T  45264536 gaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctcagaccc 45264437  T
Q  265 tgcgtatgcgggagttttagt 285  Q
    ||| |||||||||| ||||||    
T  45264436 tgcatatgcgggagctttagt 45264416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 8197057 - 8197120
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| ||||||||||||  ||  || |||||||||||||||| ||||||    
T  8197057 atgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaag 8197120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 33222998 - 33223080
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| |||||||||||  || ||||| || ||||||| |||||||| |||||||||| ||| ||| |||||||| ||||||    
T  33222998 atgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgt-aaaaacagggaaaggttgcgtacaatacaccaaa 33223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 20169207 - 20169157
Alignment:
Q  184 gtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    |||||||||||| | |||||||||||||| | ||||||| |||||||||||    
T  20169207 gtcctgaaaacaccctcttgtgtaaaaaaaaaggtaagactgtgtacaata 20169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 39215094 - 39215020
Alignment:
Q  167 aaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| | ||||||||| ||| ||||| | ||||||||||||||| |||||||  || ||||||||| |||||    
T  39215094 aaaggtcccaagttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtacaatattccaaa 39215020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 8e-26; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 11617732 - 11617588
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||| | |||||||||||||||||||||||| || |||||||| ||||||| ||| ||| ||||||    
T  11617732 atgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 11617633  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctta 302  Q
    | |||  ||||||||| |||  ||||||  | |||||||||||||    
T  11617632 tggaccctgcgtatgcaggacctttagtgcaccgggttgccctta 11617588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 23419818 - 23419675
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    |||||||  |||||||||  |||||||| ||| ||||||| |||||||||||||||||||||||| || |||||||| ||||||| ||| ||| ||||||    
T  23419818 atgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcc 23419719  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    |||||  ||||| |||||| | ||||||  |||||| |||||||    
T  23419718 tagaccttgcgtgtgcgggggctttagtgcatcgggctgccctt 23419675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 19427033 - 19426949
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||| || |||||||| |||||||    
T  19427033 atgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaatacaccaaat 19426949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 27629628 - 27629724
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||| ||| |||| ||||||| ||| ||| ||||||    
T  27629628 tgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaatggtgggaccccttcc 27629724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 7644949 - 7645066
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttcct 258  Q
    ||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||| ||| |||| ||| ||| |||||||    
T  7644949 gtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacaccaaaattgtgggaccccttcct 7645048  T
Q  259 agactatgcgtatgcggga 277  Q
     |||  |||||||||||||    
T  7645049 -gaccctgcgtatgcggga 7645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 8149090 - 8148963
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtg-taaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| | || ||||||||||||||||||||||||  | ||||||| ||||||| |||||||| ||| |||||||| ||||||| ||| ||| |||||    
T  8149090 atgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttc 8148991  T
Q  257 ctagactatgcgtatgcgggagttttagt 285  Q
    | ||||| |||||||||| ||||||||||    
T  8148990 ccagact-tgcgtatgcgagagttttagt 8148963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 35334958 - 35334833
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | |||||||||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||| ||| ||| ||| ||| ||||||    
T  35334958 atgtgactggaaggtcacgagttcaagtcctggaaacag--tctcgtgtaaaaaacagggtaagactgtgtacaatacaccgaatggtgggaccccttcc 35334861  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
      |||  ||||||||| |||| ||||||    
T  35334860 cggaccctgcgtatgcaggagctttagt 35334833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 42391242 - 42391101
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  42391242 atgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 42391145  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  42391144 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 42391101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 2541155 - 2541036
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||| ||| ||||||| ||| ||| ||||||  | |  |    
T  2541155 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaaatggtgggaccccttcccggtccct 2541056  T
Q  266 gcgtatgcgggagttttagt 285  Q
    ||||||||||||| ||||||    
T  2541055 gcgtatgcgggagctttagt 2541036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 42805515 - 42805597
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||| |||||    
T  42805515 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaa 42805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 32758252 - 32758393
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||||| ||||||||  |||||||||||||  ||||||||||| ||||||| ||| ||| ||||||    
T  32758252 atgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcc 32758349  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  32758350 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 32758393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 43557463 - 43557609
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||| | |||||||||||| ||||||| ||||||||||||||||| |||||  || |||||||| ||||  ||| ||| ||| || |    
T  43557463 atgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccccct 43557562  T
Q  256 cctagactatgcgtatgcgggag-ttttagtaaatcgggttgccctt 301  Q
    ||  |||| |||||||||||||| |||||||  | ||||||||||||    
T  43557563 cccggactctgcgtatgcgggagcttttagtgcaccgggttgccctt 43557609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 47716450 - 47716532
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  || |||||||| |||||    
T  47716450 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 47716532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 7879639 - 7879772
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| |||||||||||| |||||   |||||||||||||||| ||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 7879738  T
Q  268 gtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||||||||||| || |||  | ||||||||||||    
T  7879739 gtatgcgggagcttcagtgcaccgggttgccctt 7879772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 166 - 301
Target Start/End: Complemental strand, 21172143 - 21172010
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||  |||  |    
T  21172143 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccct 21172046  T
Q  266 gcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    || |||||||||| | ||||  | ||||||||||||    
T  21172045 gcatatgcgggagctctagtgcaccgggttgccctt 21172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 48123620 - 48123508
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||| | |||||||||||| ||||||| ||||||||||| |||||||||| | ||  ||||||| ||||||| ||| ||| |||| || ||| ||    
T  48123620 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaatggtgggacccctttctggaccat 48123521  T
Q  266 gcgtatgcgggag 278  Q
    || ||||||||||    
T  48123520 gcatatgcgggag 48123508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 35203438 - 35203513
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||||||| |||||||||||| |||||   |||||||||||||||||| ||||| || |||||||||||||||    
T  35203438 gaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaaa 35203513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 42798660 - 42798803
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| ||||||||| || ||||||  |||||||||||||||| ||||||  || |||||||| ||||||| ||| ||| | ||||    
T  42798660 atgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccctttcc 42798759  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  ||||||||||||||    
T  42798760 cggaccctgcatatgcgggagctatagtgcatcgggttgccctt 42798803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 10693215 - 10693097
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||| ||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  10693215 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 10693118  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||| ||||||||||    
T  10693117 cggaccctgcatatgcgggag 10693097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 19266441 - 19266561
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||  | |||||||||||||||| |||  |||| |||||||||||||||||  || |||||||| ||||||| ||| ||  ||||||    
T  19266441 atgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaattgtgggatcccttcc 19266540  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||||||||||||||    
T  19266541 cggaccctgcgtatgcgggag 19266561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 46354195 - 46354267
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||||| |||||||||||| ||||| | |||||||||||||||||||||||  || |||||||| |||||    
T  46354195 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 46354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 5180301 - 5180218
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| ||||||||| | |||||| | ||| ||||||| |||||||| ||||||||||||||| ||||||||| | ||||||    
T  5180301 atgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaa 5180218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 14099150 - 14099051
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||| | ||| |||||||| ||| ||| | |||||||||||||||| ||||| || |||||||| ||||||| ||| ||| ||||||    
T  14099150 atgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatggtgggaccccttcc 14099051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 14409167 - 14409068
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||| | ||| |||||||| ||| ||| | |||||||||||||||| ||||| || |||||||| ||||||| ||| ||| ||||||    
T  14409167 atgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatggtgggaccccttcc 14409068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 15108527 - 15108453
Alignment:
Q  171 gtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtg 246  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| ||||||  ||||||||||| | |||||||||    
T  15108527 gtcacgagttcaagtcctggaaacagtttcttgtgta-aaaacaaggtaaggctgtgtacaatacatcaaatagtg 15108453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 22699114 - 22699031
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| ||||||| | | |||||||||||| ||| ||  |||||||||||||||||||||||| || |||||||| ||||||    
T  22699114 atgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 22699031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 33872053 - 33871927
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| |||||||| || |||||||||||| ||||| | ||||||||| |||||||| ||||  || |||||||| ||||||| ||| ||| ||||||    
T  33872053 atgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgta-aaaacaggataaggctgcgtacaatacaccaaatggtgggaccccttcc 33871955  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
     ||||  || ||||||| ||| ||||||    
T  33871954 cagaccctgtgtatgcgagagctttagt 33871927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 34626330 - 34626209
Alignment:
Q  179 ttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggag 278  Q
    ||||||||||| ||||||| || |||||||||| |||||||||  || || ||||| ||||||| ||| ||  ||||||  |||  ||||||||||||||    
T  34626330 ttcaagtcctggaaacagcctcctgtgtaaaaa-cagggtaaggctgcgttcaatacaccaaatggtgggatcccttcccggaccctgcgtatgcgggag 34626232  T
Q  279 ttttagtaaatcgggttgccctt 301  Q
     ||||||  ||||||||||||||    
T  34626231 ctttagttcatcgggttgccctt 34626209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 11741786 - 11741868
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||| | |||||||||||||||||||||||| ||||  |||| ||||||||  || |||||||| |||||||    
T  11741786 atgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgt--aaaatagggtaaggctgcgtacaatacaccaaat 11741868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 13805093 - 13805212
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||| ||| |||||||||||| ||| ||| ||| |||||||| |  |||||||  ||||||||||| ||||||| ||| |||  |||||    
T  13805093 atgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaaca-ggggtaaggctgtgtacaatacaccaaatggtgggaccacttcc 13805191  T
Q  258 tagactatgcgtatgcgggag 278  Q
    | |||  ||||||||||||||    
T  13805192 tggaccctgcgtatgcgggag 13805212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 18512588 - 18512477
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||| |||||||||||| ||||| | ||||||||| |||| ||||||||  || |||||||| ||| ||| ||| ||| ||||||  |||  |    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccct 18512490  T
Q  266 gcgtatgcgggag 278  Q
    |||||||||||||    
T  18512489 gcgtatgcgggag 18512477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 38262341 - 38262213
Alignment:
Q  157 aatgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    |||||||| | ||||||||| |||||||||||| ||||||  |||||||||||||| | |||||  |||  ||||||| |||||||  || ||| |||||    
T  38262341 aatgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaatgatgggaccccttc 38262242  T
Q  257 ctagactatgcgtatgcgggagttttagt 285  Q
    |   ||  |||||||||||||| ||||||    
T  38262241 ccgaacactgcgtatgcgggagctttagt 38262213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 12473303 - 12473378
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||||| | |||||||||||| ||||| | |||||||| ||||||||||||||  || |||||||| ||||||    
T  12473303 gaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaaggatgcgtacaatacaccaaa 12473378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 16341277 - 16341332
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||||| |||||||| ||  ||||||| |||||||||||||||||||||||    
T  16341277 gaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaag 16341332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 29907410 - 29907473
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| |||||||||||  ||||||| |||||||||||||| || |||||    
T  29907410 atgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaag 29907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 1408469 - 1408547
Alignment:
Q  179 ttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||  ||||||||||| | ||||| ||| ||| ||||||    
T  1408469 ttcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagcaaatggtgggaccccttcc 1408547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 18747479 - 18747605
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaatagtgagactccttcct 258  Q
    ||||| ||||||||||| | ||||||| || ||||||| | |||||||||||| |||||||||  || ||| |||| ||||| | ||| ||| |||||||    
T  18747479 gtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaattggtgggaccccttcct 18747578  T
Q  259 agactatgcgtatgcgggagttttagt 285  Q
      ||  |||||||||||||| ||||||    
T  18747579 gaaccctgcgtatgcgggagctttagt 18747605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 38604546 - 38604642
Alignment:
Q  186 cctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagtttta 283  Q
    |||| ||||||| |||||||||||| ||||||||||  || |||||||| ||||||| ||||||| |||| |  |||  |||||||||||||| ||||    
T  38604546 cctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgcgggagcttta 38604642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 42476864 - 42476982
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    |||||||  ||||||||||  ||||||| ||| ||||||  ||||||||  |||||| ||||||  || |||||||| ||||||| ||| ||| ||||||    
T  42476864 atgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgt--aaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 42476961  T
Q  258 tagactatgcgtatgcgggag 278  Q
    ||| || ||| ||||||||||    
T  42476962 taggctctgcatatgcgggag 42476982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 48735265 - 48735123
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcc-tgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttc 256  Q
    ||||||| ||||||||||| |||||||||| || ||||| | ||||||||  |||||| ||||||  || |||||||| ||||||| ||| ||| |||||    
T  48735265 atgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgt--aaaacacggtaaggctgcgtacaatacaccaaatggtgggaccccttc 48735168  T
Q  257 ctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    |  |||  ||| |||||||||| | ||||  | ||||||||||||    
T  48735167 ccggaccctgcatatgcgggagctctagtgcaccgggttgccctt 48735123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 28362281 - 28362185
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagac 262  Q
    ||||||||||  |||||||||||  |||| || |||||||||||||||  ||||||  || |||||||| ||||||| ||| ||| |||||| ||||    
T  28362281 gaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagac 28362185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 31591243 - 31591199
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa 210  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||    
T  31591243 gaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaa 31591199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 42495976 - 42495917
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    |||| ||||||||||| |||||||||||| ||||||| |||||| | ||||||||||||||    
T  42495976 tgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtat-aaaaacagggtaag 42495917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 47077997 - 47077945
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa 210  Q
    ||||||| ||||||||||| |||||||||||| ||||||  ||||||||||||    
T  47077997 atgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 7794650 - 7794596
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa 212  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||| |||||||||    
T  7794650 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaa 7794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 18327035 - 18327087
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||| |||||||||| | ||||||| |||||||| ||||||||||||||    
T  18327035 aaggtcacgggttcaagtcccggaaacagcctcttgtgt-aaaaacagggtaag 18327087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 19265808 - 19265904
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||| ||||||||||| ||||||||| || | |||||  ||||||| ||||| ||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  19265808 gtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgt-aaaaagagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 19265904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 21447591 - 21447636
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaac 213  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||    
T  21447591 aaggtcacggattcaagtcttgaaaacagcctcttgtgtaaaaaac 21447636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 8e-26; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38834987 - 38835107
Alignment:
Q  1 cttttgccttatgaaggtgaactagttgatgaccctttttgttggaatgcttatggaagacaagagactttgactattcctccacttgattgtttaaggg 100  Q
    |||||||| | |||||||||| |  | |||||||||||||||||||||||||||||    ||||||||||||||||| |||||| || ||||||||||||    
T  38834987 cttttgccatttgaaggtgaattgttggatgaccctttttgttggaatgcttatggggctcaagagactttgactatacctccaattaattgtttaaggg 38835086  T
Q  101 aaggtgagcctgaaactgttg 121  Q
    ||||||| ||||| |||||||    
T  38835087 aaggtgaccctgagactgttg 38835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 19027841 - 19027966
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttccta 259  Q
    ||||| ||||||||||| |||||||||||| ||||| | |||||||||||||||||||||||  || |||||||| ||||| | ||| ||| |||| | |    
T  19027841 gtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgggacccctttcca 19027940  T
Q  260 gactatgcgtatgcgggagttttagt 285  Q
    |||| |||||||| ||||| ||||||    
T  19027941 gactctgcgtatgtgggagctttagt 19027966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 47443952 - 47444047
Alignment:
Q  162 gaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  47443952 gaccgaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 47444047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 16408747 - 16408665
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||| || |||||||| |||||    
T  16408747 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaa 16408665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 44363276 - 44363131
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc--aaatagtgagactcctt 255  Q
    ||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| |  || ||||||   |||  |||| ||| ||| ||||    
T  44363276 atgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggacccctt 44363177  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  44363176 cccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 44363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 39077930 - 39077848
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagac 250  Q
    ||||||||||| |||||||||||| ||||||| ||||||||  ||||||||||||| ||| |||||||||||||||| |||||||    
T  39077930 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggttgcgtacaatataccaaatggtgagac 39077848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 5648250 - 5648369
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  5648250 atgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 5648348  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||||||||||||||    
T  5648349 cggaccctgcgtatgcgggag 5648369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 6430769 - 6430626
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| ||||||||| || ||||||| ||||||||| |||||||||||||  || |||||||| ||||||| ||| |||  |||||    
T  6430769 atgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgta-aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccacttcc 6430671  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctta 302  Q
      |||  |||||||||||||| |||||   | |||||||||||||    
T  6430670 cggaccctgcgtatgcgggagctttagcgcaccgggttgccctta 6430626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 48598967 - 48598826
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  48598967 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 48598870  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      ||| |||| ||||| |||| | ||||  | ||||||||||||    
T  48598869 cggaccatgcatatgccggagctctagtgcaccgggttgccctt 48598826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 5306807 - 5306709
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||| |||| ||||||||| ||| |||||||| ||||||| ||| ||| ||||||    
T  5306807 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaatcagggtaaggttgcgtacaatacaccaaatggtgggaccccttcc 5306709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 17043536 - 17043413
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttccta 259  Q
    ||||| ||||||||||  |||||||||||| ||||||| |||||||||||| ||||||||||  || |||||||| ||||||| ||| ||| |||||| |    
T  17043536 gtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccca 17043437  T
Q  260 gactatgcgtatgcgggagtttta 283  Q
    |||  ||| ||||| |||| ||||    
T  17043436 gaccctgcatatgctggagcttta 17043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 37494850 - 37494969
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||  |||||||||||| ||||| | ||||||||||||||||||||||| |||  ||||||||||||||| ||| ||| |||| |  |||  |    
T  37494850 gaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatataccaaatggtgggacccctttcgggaccct 37494949  T
Q  266 gcgtatgcgggagttttagt 285  Q
    |||||||| |||| ||||||    
T  37494950 gcgtatgcaggagctttagt 37494969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 159 - 301
Target Start/End: Original strand, 30639372 - 30639513
Alignment:
Q  159 tgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcct 258  Q
    |||||| ||||||||||  |||||||||||| ||||||  ||||||||||||| |||||||||  || |||||||| ||||||| ||||||| ||||||     
T  30639372 tgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaatggtgagaccccttccc 30639470  T
Q  259 agactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
     |||  ||| |||||||||| ||||||  |  |||||||||||    
T  30639471 ggaccctgcatatgcgggagctttagtgcactgggttgccctt 30639513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 9832452 - 9832358
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  9832452 tgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 9832358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 11054290 - 11054208
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| ||||||||||| |||||||||||||||||||  ||||||||  |||||||||||||| || |||||||| |||||||    
T  11054290 atgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt--aaaacagggtaagactgcgtacaatacaccaaat 11054208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 7385620 - 7385500
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| ||||||| |||| ||||||| || ||||||||||| |||||||| |||||| ||||| ||||||| ||| ||| | ||||    
T  7385620 atgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaatggtgggaccctttcc 7385521  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  || |||||||||||    
T  7385520 cggaccctgtgtatgcgggag 7385500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 21646955 - 21647098
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| | ||||||||  |||||||||||| ||||||| |||||||||||||| ||||||||  || |||||||||||||  ||| ||| ||| ||||    
T  21646955 atgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggacccctt 21647054  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccc 299  Q
    || ||||   || |||||||||| ||||||  | ||||||||||    
T  21647055 cccagaccccgcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 25463113 - 25463233
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||| | ||||||||||||||| ||| ||| ||| |||||| | ||||||| ||| ||| ||||||    
T  25463113 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaaatggtgggaccccttcc 25463212  T
Q  258 tagactatgcgtatgcgggag 278  Q
      |||  ||| ||||||||||    
T  25463213 cggaccctgcatatgcgggag 25463233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 7038044 - 7038126
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||| |  |||||||| ||||||    
T  7038044 atgtgactgaaaggtcacaggttcaagtcctgaaa-cagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaaa 7038126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 20639777 - 20639659
Alignment:
Q  184 gtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacc-aaatagtgagactccttcctagactatgcgtatgcgggagtttt 282  Q
    |||||| ||||||| |||||||||||||||||||||||  || |||||||| ||| |||| ||| ||| ||||||  |||  |||||||||||||| |||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 20639678  T
Q  283 agtaaatcgggttgccctt 301  Q
    |||  | ||||||||||||    
T  20639677 agtgcaccgggttgccctt 20639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 20224975 - 20225116
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||| | |||||||||||| ||||| | ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  20224975 atgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 20225072  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  20225073 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 20225116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 47528672 - 47528575
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  47528672 atgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 47528575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 23501784 - 23501923
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||      ||||| ||||||||||||||||||||||| ||| |||||||| ||||  ||| ||| ||| ||||    
T  23501784 atgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggacccctt 23501877  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  ||| |||||||||| ||||||  | ||||||||||||    
T  23501878 cccggaccctgcatatgcgggagctttagtgcaccgggttgccctt 23501923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 35567169 - 35567260
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||||| | ||||||||| || |||||||  ||||||||||||||||||||||  ||||||||| | ||||||| ||| ||| ||||||    
T  35567169 gaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaatggtgggaccccttcc 35567260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 54967012 - 54967110
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||| ||| ||| | | ||||||||||||||||||||||| |||  ||||||||||||||| ||| ||| ||||||    
T  54967012 atgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaaggttg-ctacaatataccaaatggtgggaccccttcc 54967110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 16911553 - 16911698
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    |||||||  |||||||||| |||||||||||  ||||||| ||||||||| ||| |||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  16911553 atgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggacccctt 16911652  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||| ||||||| ||||||  | ||||||||||||    
T  16911653 cccggaccctgcgtacgcgggagctttagtttaccgggttgccctt 16911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 29208039 - 29207900
Alignment:
Q  159 tgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcct 258  Q
    |||||| ||||||||||| |||||||||||| |||  || ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||     
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 29207942  T
Q  259 agactatgcgtatgcgggagttttagtaaatcgggttgccct 300  Q
     |||  ||| |||||||||| | ||||  | |||||||||||    
T  29207941 ggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 40915830 - 40915939
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| |||||||||||| ||||||| |||||||| ||||||| ||||||  || |||||||| ||||||| ||| ||  ||||||  |||  |||    
T  40915830 aaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacaaggtaaggctgcgtacaatacaccaaatggtgggagcccttcccggaccctgc 40915928  T
Q  268 gtatgcgggag 278  Q
    |||||||||||    
T  40915929 gtatgcgggag 40915939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 285
Target Start/End: Original strand, 14983835 - 14983952
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    |||||||||  |||||||| |  ||||||| |||||||||||||| |||||||| |||  ||||||| || |||| ||| ||| ||||||  |||  |||    
T  14983835 aaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggttgcctacaatacactaaatggtgggaccccttcccggaccctgc 14983934  T
Q  268 gtatgcgggagttttagt 285  Q
    ||||||||||| ||||||    
T  14983935 gtatgcgggagctttagt 14983952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 41018935 - 41018824
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttccta 259  Q
    ||||| ||||||||||| |||||||||||| ||||| | ||||||||||||   ||||||||  |  |||||||| ||||||||||| ||| |||||| |    
T  41018935 gtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatt-agggtaaggctacgtacaatacaccaaatagtgggaccccttccca 41018837  T
Q  260 gactatgcgtatg 272  Q
    |||  ||||||||    
T  41018836 gaccttgcgtatg 41018824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 302
Target Start/End: Complemental strand, 7909397 - 7909280
Alignment:
Q  185 tcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgc-gggagtttta 283  Q
    ||||| ||||||  ||||||||||||| ||||||||| ||| |||||||| ||||||| ||| ||| ||||||   ||  ||||||||| ||||| ||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcggggagcttta 7909299  T
Q  284 gtaaatcgggttgccctta 302  Q
    ||  |||||||||||||||    
T  7909298 gtgcatcgggttgccctta 7909280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 301
Target Start/End: Original strand, 25629081 - 25629183
Alignment:
Q  199 tcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagtaaatcgggttgcc 298  Q
    |||||||||||||| ||||||||  ||||||||||| ||||||| ||| ||| ||||||  |||  | | |||||||||| ||||||  | |||||||||    
T  25629081 tcttgtgtaaaaaatagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgcc 25629180  T
Q  299 ctt 301  Q
    |||    
T  25629181 ctt 25629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 54730240 - 54730294
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa 212  Q
    |||||||| |||||||||| |||||||||||  ||||||| ||||||||||||||    
T  54730240 atgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaa 54730294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 9987957 - 9987853
Alignment:
Q  179 ttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggag 278  Q
    ||||||||||| ||||| | ||||||||||| || ||||||||  ||  ||||||| ||||||| ||| ||| ||||||| |||  ||| ||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaatggtgggaccccttccttgaccttgcatatgcgggag 9987858  T
Q  279 tttta 283  Q
     ||||    
T  9987857 cttta 9987853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 10380086 - 10379999
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtg 246  Q
    ||||||| ||||||||||  |||||||||||  ||||| | ||||||||| |||| ||| ||| |||| |||||||| |||||||||||    
T  10380086 atgtgactgaaaggtcacttgttcaagtcctacaaacaacctcttgtgta-aaaataggataaaattgcgtacaatacaccaaatagtg 10379999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 30352733 - 30352681
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa 212  Q
    ||||||||||||||||| |||  ||||||| ||||||| ||||||||||||||    
T  30352733 gtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 30690325 - 30690273
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa 212  Q
    ||||| ||||||||||| |||||||||||| ||| ||| ||||||||||||||    
T  30690325 gtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaa 30690273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 39029185 - 39029129
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    ||||||| | || ||||||| |||||||||||||||||||||||  |||||||||||    
T  39029185 gttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaata 39029129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 51865149 - 51865057
Alignment:
Q  191 aaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagtttta 283  Q
    ||||||| |||||||||||||||| ||||||  || |||||||| ||||||| ||| | | ||||||  |||  |||||||||||||| ||||    
T  51865149 aaacagcctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgcgggagcttta 51865057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 54175054 - 54175137
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctg-aaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| |||| ||||||  ||||||||||| |||||||| |||||||| ||||||||||||||  || |||||||| ||||||    
T  54175054 atgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaatacaccaaa 54175137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 30581602 - 30581527
Alignment:
Q  167 aaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaa 241  Q
    |||||||| | ||||||||| || ||||| | |||||||||||||| |||||||||  ||||||||||| ||||||    
T  30581602 aaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaaa 30581527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 42164292 - 42164230
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| ||||||||| || ||||| | ||||||||| |||||||||||||    
T  42164292 atgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta-aaaacagggtaag 42164230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 49938732 - 49938681
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||| ||||||||||  |||||||||||| ||||||| |||||||||||||    
T  49938732 gtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 49938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 487279 - 487217
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaa 220  Q
    ||||||| ||||||||||| ||||||||| || ||||| | ||||||||| |||||| |||||    
T  487279 atgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaa 487217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 21489099 - 21489153
Alignment:
Q  179 ttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaat 233  Q
    ||||||||||| ||||||| ||||| ||||||||||| |||||| || |||||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaat 21489153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 23580350 - 23580288
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaaga 222  Q
    ||||| ||||||||||| |||||||| ||  ||| ||| ||||||||||||||||||| ||||    
T  23580350 gtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaaga 23580288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 36589754 - 36589796
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaa 220  Q
    |||||||||||| ||||||| |||||||||||||||| |||||    
T  36589754 gttcaagtcctggaaacagcctcttgtgtaaaaaacatggtaa 36589796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 47441672 - 47441590
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||| ||||||||||  ||||||||||   ||||||  |||| |||||||| |||||||||  ||||||||||| |||||||    
T  47441672 gtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaatacaccaaat 47441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 54640475 - 54640429
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa 212  Q
    ||||||||||| ||||||||| || ||||||| ||||||||||||||    
T  54640475 gaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa 54640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 10660395 - 10660538
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||| ||  |||||||||||| ||||| | |||| ||||||||| |||||| |  ||  ||||||| ||||  ||| ||||||| ||||    
T  10660395 atgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtgagacccctt 10660494  T
Q  256 cctagactatgcgtatgcgggag-ttttagtaaatcgggttgccc 299  Q
    || ||||  |||||||||||||| ||| |||  ||||||||||||    
T  10660495 ccaagac-ctgcgtatgcgggagctttaagtgcatcgggttgccc 10660538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 10874540 - 10874683
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||| ||  |||||||||||| ||||| | |||| ||||||||| |||||| |  ||  ||||||| ||||  ||| ||||||| ||||    
T  10874540 atgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtgagacccctt 10874639  T
Q  256 cctagactatgcgtatgcgggag-ttttagtaaatcgggttgccc 299  Q
    || ||||  |||||||||||||| ||| |||  ||||||||||||    
T  10874640 ccaagac-ctgcgtatgcgggagctttaagtgcatcgggttgccc 10874683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 25343180 - 25343261
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||| || |||||||  |||||||| ||| ||| ||  |||||||||||||||||||||||  || |||||||| ||||||    
T  25343180 gtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 30496462 - 30496413
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaa 209  Q
    ||||| ||||||||||| ||||||||| || ||||||| |||||||||||    
T  30496462 gtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaa 30496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 43035241 - 43035302
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||| ||||||||||| |||||||||| | ||||| | |||||||||| ||||| ||||||    
T  43035241 gtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaag 43035302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 42924977 - 42924895
Alignment:
Q  159 tgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| |||||||| ||||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaa 42924895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 38879572 - 38879717
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  38879572 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccctt 38879671  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  38879672 cccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 38879717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 8170126 - 8169985
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||||||||||||||| |||||||||||| ||||||| | ||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  8170126 atgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 8170029  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| ||||||||||||| |||  | ||||||||||||    
T  8170028 cggaccctgcatatgcgggagtttcagtgcaccgggttgccctt 8169985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 24448881 - 24449024
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||||| | |||||||||||| ||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  24448881 atgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 24448980  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||||||||| |||| ||||||  | ||||||||||||    
T  24448981 cggaccctgcgtatgcaggagctttagtgcaccgggttgccctt 24449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 41014310 - 41014452
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  41014310 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 41014408  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    | |||   || |||||||||| ||||||  | ||||||||||||    
T  41014409 tggaccccgcatatgcgggagctttagtgcaccgggttgccctt 41014452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 32703415 - 32703556
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  32703415 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 32703512  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  32703513 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 32703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 43574609 - 43574723
Alignment:
Q  170 ggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgt 269  Q
    ||||||| |||||||||||| |||||   ||||||||| |||||||||||||  || |||||||||||||||| ||| ||| ||||||  |||  |||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgt 43574708  T
Q  270 atgcgggagttttag 284  Q
    ||||||||| |||||    
T  43574709 atgcgggagctttag 43574723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 24903817 - 24903741
Alignment:
Q  181 caagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||  ||||| | ||||||| ||||||    
T  24903817 caagtcctgaaaacagccttttgtgtaaaaaatagggtaagattgtgtacaatccaccaattggtgagaccccttcc 24903741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 4619250 - 4619168
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| | ||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||  || |||||||| |||||    
T  4619250 atgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 4619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 27328743 - 27328825
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||  |||||||||||| ||||||  |||||||||||||||||||||||  || |||||||| |||||    
T  27328743 atgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 27328825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 16880757 - 16880664
Alignment:
Q  192 aacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagt 285  Q
    |||||| |||||||||||||||||||||||  || |||||||| ||||||| ||| |||  |||||  ||| ||||||||||||||| ||||||    
T  16880757 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggaccatgcgtatgcgggagctttagt 16880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 7097872 - 7097777
Alignment:
Q  189 gaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagt 285  Q
    ||||||||| ||||||||||||| ||||||||| ||| |||||||| ||||||| ||||||| ||||||   ||  |||||||||||||| ||||||    
T  7097872 gaaaacagcctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgcgggagctttagt 7097777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 43334193 - 43334277
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt-aaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    ||||||| ||||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||  || |||||||| ||||||    
T  43334193 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaa 43334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 19143066 - 19142960
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcggga 277  Q
    |||||||||||| ||||| | ||||||||||||| |||||||||  || ||||| || ||||||| ||| ||| ||||||  ||| ||||||||||||||    
T  19143066 gttcaagtcctggaaacaacctcttgtgtaaaaa-cagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccggaccatgcgtatgcggga 19142968  T
Q  278 gttttagt 285  Q
    | ||||||    
T  19142967 gatttagt 19142960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 22025542 - 22025597
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||| | |||||||||||| ||||||| |||||||||||||||||||||||    
T  22025542 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 22025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 34074703 - 34074622
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    |||| |||||||||| ||||||||||||  ||||||| ||||||||||||||||  ||||| ||| || ||||| |||||||    
T  34074703 tgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaaat 34074622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 22187279 - 22187359
Alignment:
Q  161 tgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    |||| ||||||||||  ||| |||||||| ||||||| |||||||||||||||| | ||||| || |||||||| ||||||    
T  22187279 tgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaa 22187359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 301
Target Start/End: Original strand, 35710312 - 35710445
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactat 265  Q
    ||||||||||| |||||||||||| ||||||| ||||||||  |||| ||||||||  || || ||||| ||||||| ||| ||| ||||||  ||  ||    
T  35710312 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaaggctgcgttcaatacaccaaatggtgggaccccttcccggaacat 35710409  T
Q  266 gcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    || |||||||||| | ||||  | ||||||||||||    
T  35710410 gcatatgcgggagctctagtgcaccgggttgccctt 35710445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 37024698 - 37024646
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa 210  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  37024698 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 23974771 - 23974834
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| | ||||||||| |||||||||||| ||||| | |||||||||||||| ||||||||    
T  23974771 atgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaag 23974834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 41425952 - 41426055
Alignment:
Q  171 gtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgta 270  Q
    |||||| |||||||| ||| ||||| ||| |||||||||||||||||||||  ||  ||||||| ||||| | ||| ||| |||||| ||||| |||| |    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacaccaattggtgggaccccttcccagactctgcgga 41426051  T
Q  271 tgcg 274  Q
    ||||    
T  41426052 tgcg 41426055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 13801893 - 13801831
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    |||||||||||| || |||| |||||||||||||||||||||||  || |||||||| |||||    
T  13801893 gttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 13801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 1405188 - 1405321
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| |||||||||||| ||||| | |||| | ||||||| || ||||| ||| |||||||| ||||||| ||| ||| | |||||  ||  |||    
T  1405188 aaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaatggtgggaccctttcctgaaccctgc 1405287  T
Q  268 gtatgcgggagttttagtaaatcgggttgccctt 301  Q
     |||||||||| | ||||| | ||| ||||||||    
T  1405288 atatgcgggagctctagtacaccggattgccctt 1405321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 22600445 - 22600529
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| | ||||| ||| |||||||||||| |||||   | |||||||||| ||||||||||  ||||||||||| |||||||    
T  22600445 atgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctgtgtacaatacaccaaat 22600529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 24323829 - 24323745
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagac 262  Q
    |||||||| ||| ||||| | |||||||||||| |||||||||| ||| ||| ||||  |||||||||| ||| |||||| ||||    
T  24323829 gttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaaatagtgggaccccttcccagac 24323745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 24360453 - 24360369
Alignment:
Q  178 gttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagac 262  Q
    |||||||| ||| ||||| | |||||||||||| |||||||||| ||| ||| ||||  |||||||||| ||| |||||| ||||    
T  24360453 gttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaaatagtgggaccccttcccagac 24360369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 28516570 - 28516520
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagg 216  Q
    ||||||||||| ||||||||| || ||||| | ||||||||||||||||||    
T  28516570 gaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacagg 28516520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 17419904 - 17419945
Alignment:
Q  157 aatgtgaccgaaaggtcacgagttcaagtcctgaaaacagct 198  Q
    |||||||| ||||||| |||||||||||||||| ||||||||    
T  17419904 aatgtgactgaaaggttacgagttcaagtcctggaaacagct 17419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 29356001 - 29355856
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  29356001 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggacccctt 29355902  T
Q  256 cctagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| ||||||  | ||||||||||||    
T  29355901 cccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 29355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 12222061 - 12221915
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatatacca--aatagtgagactcctt 255  Q
    ||||||| ||||||||||| ||||||||| || ||||||| |||||||||||||||||||||||  || |||||||| ||||  ||| ||| ||| ||||    
T  12222061 atgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccctt 12221962  T
Q  256 cctagactatgcgtatgcgggag-ttttagtaaatcgggttgccctt 301  Q
    ||  |||  |||||||||||||| |||||||  | ||||||||||||    
T  12221961 cccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctt 12221915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 18277328 - 18277212
Alignment:
Q  167 aaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatg 266  Q
    |||||||||| |||||| || || ||||||| ||||||||||||| ||||||||| ||| |||||  | ||||||| ||| ||| |||||||||||| |     
T  18277328 aaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaaggttgagtacagaacaccaaatggtgggaccccttcctagactcta 18277229  T
Q  267 cgtatgcgggagtttta 283  Q
    |||||||||||| ||||    
T  18277228 cgtatgcgggagcttta 18277212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 23240964 - 23240841
Alignment:
Q  160 gtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttccta 259  Q
    ||||| ||||||||||  || ||||||||| ||||||| ||||||||||||  ||||||||| ||| |||||||||||||| | ||| ||| |||||       
T  23240964 gtgactgaaaggtcacaggtgcaagtcctggaaacagcctcttgtgtaaaa--cagggtaagtttgcgtacaatataccaattggtgggaccccttctag 23240867  T
Q  260 gactatgcgtatgcgggagttttagt 285  Q
    ||| ||||||||||||||| ||||||    
T  23240866 gacaatgcgtatgcgggagctttagt 23240841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 1346955 - 1347096
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| |||||||  |||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  1346955 atgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 1347052  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  1347053 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 1347096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 1354899 - 1354758
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||||| ||||||||  |||||||||||||  || |||||||| ||||||| ||| ||| ||||||    
T  1354899 atgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcc 1354802  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  1354801 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 1354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 32728300 - 32728212
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtg 246  Q
    ||||||| ||||||||||   |||||||  || ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  32728300 atgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatataccaaatagtg 32728212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 13628368 - 13628273
Alignment:
Q  191 aaacagcttcttgtgtaaaaaa-cagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgcgtatgcgggagttttagt 285  Q
    ||||||| |||||| ||||||| || ||||| |||| |||||||| || ||||||  |||| |||||||||||| |||||||||||||||||||||    
T  13628368 aaacagcctcttgtttaaaaaaacaaggtaaaattgcgtacaatacactaaatagcaagaccccttcctagactctgcgtatgcgggagttttagt 13628273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 2166556 - 2166474
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||||||||| ||||| |||| ||| |||||||| |||||    
T  2166556 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaa 2166474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 2178189 - 2178107
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||||||||| ||||| |||| ||| |||||||| |||||    
T  2178189 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaa 2178107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 8409233 - 8409310
Alignment:
Q  157 aatgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaata 234  Q
    |||||||| |||||||||||  ||||||||||| |||| || |||||||||||||||||||||||  || ||||||||    
T  8409233 aatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaata 8409310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 13905123 - 13905060
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||| ||||||||||| | |||||||||||||||  | |||||||||||||||||||||||    
T  13905123 atgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 14553511 - 14553585
Alignment:
Q  167 aaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaa 241  Q
    |||||||||  |||||||||||| ||| |||||||||||||||||| ||||||||  |||||| |||| ||||||    
T  14553511 aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaa 14553585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 17432332 - 17432394
Alignment:
Q  159 tgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    |||||| ||||||||||  |||||||||||| ||||| | |||||||||||||||||||||||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaag 17432394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 9161114 - 9161167
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||||| ||||||||||  |||||||||||| ||||||| |||||||||||||    
T  9161114 atgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 9161167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 3815221 - 3815137
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| |||| |||||| |||||||||||| ||||||  | |||||||||||| | |||| || || |||||||| |||||||    
T  3815221 atgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgtacaatacaccaaat 3815137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 6024234 - 6024306
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    |||||||||  ||||| ||||  ||||||| |||||||||||||||| ||||||| || |||||||| |||||    
T  6024234 aaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaa 6024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 14975224 - 14975168
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaaca 214  Q
    ||||||| | |||||||||  ||||||||||| ||||||| ||||||||||||||||    
T  14975224 atgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaaca 14975168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 17448323 - 17448378
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||||| ||||||||  |||||||| | | |||||||||||||||||||||    
T  17448323 gaaaggtcacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaag 17448378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 24097580 - 24097635
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    ||||||||||||||| |||||||  || |||| |||||| ||||||||||||||||    
T  24097580 gaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaag 24097635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 4136648 - 4136598
Alignment:
Q  171 gtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaag 221  Q
    |||||| ||||||||||| |||||| | |||||||||||| ||||||||||    
T  4136648 gtcacgggttcaagtcctaaaaacaacatcttgtgtaaaatacagggtaag 4136598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 20400658 - 20400744
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatag 244  Q
    ||||||| ||||||||||  ||||||||  || |||||   |||||||||||||||||||||||| || ||||| || || ||||||    
T  20400658 atgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacactaaatag 20400744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 27855582 - 27855528
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaa 212  Q
    ||||||| |||| ||| |||||| |||||| |||||||||||| |||||||||||    
T  27855582 atgtgactgaaatgtcgcgagtttaagtcccgaaaacagcttcctgtgtaaaaaa 27855528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 22967162 - 22967215
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||||| | |||||||| |||||||||| || ||||| |||||||||||||||    
T  22967162 atgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 22967215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 23821231 - 23821178
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||||| | |||||||| |||||||||| || ||||| |||||||||||||||    
T  23821231 atgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 23821178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 46832 - 46965
Alignment:
Q  168 aaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcctagactatgc 267  Q
    ||||||||| |||||||| ||| ||||| | |||||||||||||| |||||||| ||| |||||||| ||||||| ||| ||| ||||||  |||  |||    
T  46832 aaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 46931  T
Q  268 gtatgcgggagttttagtaaatcgggttgccctt 301  Q
    ||||||||||| ||||||  | ||||||||||||    
T  46932 gtatgcgggagctttagtgcaccgggttgccctt 46965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 24911 - 24789
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||| | |||||||||     |||||| |||||||||||||||||||||||  || |||||| | ||||||| ||| ||| ||||||    
T  24911 atgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaaatggtgggaccccttcc 24817  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
       ||  |||||||||||||| ||||||    
T  24816 cgaaccctgcgtatgcgggagctttagt 24789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 10192 - 10095
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  ||||||| |||||| || |||||||| ||||||||||| ||| ||||||    
T  10192 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcc 10095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 20520 - 20423
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||  ||||||| |||||| || |||||||| ||||||||||| ||| ||||||    
T  20520 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagagtaagactgcgtacaatacaccaaatagtgggaccccttcc 20423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 10801 - 10928
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| | ||||||||| |||||||  ||||||||| | ||||||||||||||||||||| |  || || ||||| ||||||| ||| ||| ||||||    
T  10801 atgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaatggtgggaccccttcc 10900  T
Q  258 tagactatgcgtatgcgggagttttagt 285  Q
      |||  |||||||||||||| ||||||    
T  10901 cggaccctgcgtatgcgggagctttagt 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 13167 - 13025
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||||| ||||| || ||||||| ||||||  || |||||||| ||| ||| ||| ||| ||||||    
T  13167 atgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgt-aaaaacaaggtaaggctgcgtacaatacaccgaatggtgggaccccttcc 13069  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
     ||||  |||||||||||| | ||||||  | ||||||||||||    
T  13068 cagaccctgcgtatgcgggggctttagtgcaccgggttgccctt 13025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 4148 - 4230
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaa 240  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||||||||| ||||| |||| ||| |||||||| |||||    
T  4148 atgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaa 4230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 30570 - 30711
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||||||  |||||||||||| ||||||| ||||||||  ||||||||||| |  || |||||||| ||||||| ||| ||| ||||||    
T  30570 atgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgt--aaaacagggtagggctgcgtacaatacaccaaatggtgggaccccttcc 30667  T
Q  258 tagactatgcgtatgcgggagttttagtaaatcgggttgccctt 301  Q
      |||  ||| |||||||||| | ||||  | ||||||||||||    
T  30668 cggaccctgcatatgcgggagctctagtgcaccgggttgccctt 30711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 11122 - 11174
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa 210  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  11122 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 11174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 35162 - 35077
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgt-aaaaaacagggtaagattgtgtacaatataccaaat 242  Q
    ||||||| | ||||||||| |||||||||||||||||||  ||||||||   |||||||||||||  || |||||||| |||||||    
T  35162 atgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaatacaccaaat 35077  T

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Target: scaffold1176 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 1729 - 1677
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaa 210  Q
    ||||||| ||||||||| | |||||||||||||||||| | ||||||||||||    
T  1729 atgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa 1677  T

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Target: scaffold0167 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 23590 - 23694
Alignment:
Q  158 atgtgaccgaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaaacagggtaagattgtgtacaatataccaaatagtgagactccttcc 257  Q
    ||||||| ||||||  ||| ||||||||| || ||||| | |||||||||||||||||||| ||  || ||||||| || ||||| ||| ||| ||||||    
T  23590 atgtgactgaaagggtacgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtacaatgtagcaaatggtgggaccccttcc 23689  T
Q  258 tagac 262  Q
     ||||    
T  23690 cagac 23694  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 43128 - 43173
Alignment:
Q  166 gaaaggtcacgagttcaagtcctgaaaacagcttcttgtgtaaaaa 211  Q
    ||||||||||||||||| |||||  ||||||| |||||||||||||    
T  43128 gaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaa 43173  T

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