View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10583_4 (Length: 601)
Name: NF10583_4
Description: NF10583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10583_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 577; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 577; E-Value: 0
Query Start/End: Original strand, 1 - 601
Target Start/End: Complemental strand, 36037652 - 36037052
Alignment:
| Q |
1 |
ccacttctagagacgataaccaattttggtttcgttcgtgcaatttcttgcagtccttgtgaggtttctgattctgatgatggagataaagagatttgtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
36037652 |
ccacttctagagacgataaccaattttggtttcgttcgtgcaatttcttgcagtccttgtgaggtttctgaatctgatgatggagataaagagatttgtt |
36037553 |
T |
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| Q |
101 |
gttgttgttgctgtcgcaatttctcttgtgcttccctttcctcgtcttgaattagtccttttatccgaggcgaataagcttcgtccagaaggtttctgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
36037552 |
gttgttgttgctgtcgcaatttctcttgtgcttccctttcctcgtcttgaattagtccttttatccgaggcgaataagcttcgtccaaaaggtttctgaa |
36037453 |
T |
|
| Q |
201 |
atcaacaatgcttttgttaccttccatcaacgcggaatccacggctagttcatcatgaattttgagaccaacaatggcttcagggaaacaatgagtccga |
300 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36037452 |
ataaacaatgcttttgttaccttccatcaacgcggaatccacggctagttcatcatgaattttgagaccaacgatggcttcagggaaacaatgagtccga |
36037353 |
T |
|
| Q |
301 |
ttatcattgctaaagttaatcggtggaaaatccgatagatgagaaaggatgtcgccatatttcgtgatccaccattcatgatattcaagtatcacaaata |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36037352 |
ttatcattgctaaagttaatcggtggaaaatccgatagatgagaaaggatgtcgccgtatttcgtgatccaccattcatgatattcaagtatcacaaata |
36037253 |
T |
|
| Q |
401 |
caaccttcttgttgaaatgttgtgaagtgatgtacaaaggtatgattccatcgttgaattcgtgatacacattgccggtgtagcctccattcgagaaaaa |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36037252 |
caaccttcttgttgaaatgttgtgaagtgatgtacaaaggtatgattccatcgttgaattcgtgatacacattgccggtgtagcctccattcgagaaaaa |
36037153 |
T |
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| Q |
501 |
cacagctggaacatcatgttgaacatcacaacctcgaacactaggcaaattcaccttctttgaaatgaggttcaattcatcaatggtgtccatgacactt |
600 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36037152 |
cacagctggaacatcatgttgaacatcacaacctcgaacactaggcgaattcaccttctttgaaatgaggttcaattcatcaatggtgtccatgacactt |
36037053 |
T |
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| Q |
601 |
g |
601 |
Q |
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| T |
36037052 |
g |
36037052 |
T |
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