View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10585_high_4 (Length: 250)
Name: NF10585_high_4
Description: NF10585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10585_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 84 - 240
Target Start/End: Complemental strand, 44267213 - 44267056
Alignment:
| Q |
84 |
catcactctattattatataagaagaaaaaggatcaaaatgtcattagttaaagagaaaggatgaatttgatgttagtataaagtatcaataattttagg |
183 |
Q |
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| T |
44267213 |
catcactctattattatataagaagaaaaaggatcaaaatgtcattagttaaagagaaaggatgaatttgatgttagtataaagtatcaataattttagg |
44267114 |
T |
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| Q |
184 |
accatggcc-ttttatttagtaaacagtgtccatgaaatccctcgagaatcttctctg |
240 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44267113 |
accatggcctttttatttagtaaacagtgtccatgaaatccctcgagaatcttctctg |
44267056 |
T |
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