View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10586_low_9 (Length: 340)
Name: NF10586_low_9
Description: NF10586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10586_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 25144747 - 25144461
Alignment:
| Q |
14 |
agagcttagttttaaatttttctcaagtcaagttgaagggtcatgcattcacgctttcatgaattttgattgttgaataaaaa---tcacacaacctaca |
110 |
Q |
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| T |
25144747 |
agagcttagttttaaatttttctcaagtcaagttgaagggtcatgcattcacgctttcatgaattttgatttttgaataaaaaaaatcacacaacctaca |
25144648 |
T |
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| Q |
111 |
tatcaagttgtgttttaaaatagatttggtgacgtcataatacaaatcatcaaatcctattcaacaatcatgatctttattcaaatcaatgaagtctaaa |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
25144647 |
tatcaagttgtgttttaaaatagatttggtgacgtcataatacaaatcatcaaatcctattcaacaatcttgatctttattcaaatcaatgaagtctaaa |
25144548 |
T |
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| Q |
211 |
gttgccttcaaatatgaaagtctcttagacaaaaagaaaaatgtcataagttctatcatagtaaatattgcaaacattaatcaacaa |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25144547 |
gttgccttcaaatatgaaagtctcttagacaaaaagaaaaatgtcataagttctatcatagtaaatattgcaaacattaatcaacaa |
25144461 |
T |
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