View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10587_high_6 (Length: 300)
Name: NF10587_high_6
Description: NF10587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10587_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 285
Target Start/End: Original strand, 40214416 - 40214693
Alignment:
| Q |
8 |
gagcacagaaaagataccaagtatggaggtggaatacccaattgctgtcttagtggctgcacaaatgaaaagcacaacgaaacaaagcgcttaaaaaggt |
107 |
Q |
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| T |
40214416 |
gagcacagaaaagataccaagtatggaggtggaatacccaattgctgtcttagtggctgcacaaatgaaaagcacaacgaaacaaagcgcttaaaaaggt |
40214515 |
T |
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| Q |
108 |
tcagtgtcactagctacgaagtggacctaacctaagtgcttaacacactttaatatttgattattgaccttggaccaaaccttttaacttattaataatg |
207 |
Q |
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| T |
40214516 |
tcagagtcactagctacgaagtggacctaacctaagtgcttaacacactttaatatttgattattgaccttggaccaaaccttttaacgtattaataatg |
40214615 |
T |
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| Q |
208 |
tagaaagcaaaactaataacaagggagatatgattattatgcttgtgcttgttctaatcatctttcatatgtcacctt |
285 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40214616 |
tagaaagcaaaactaataactagggagatatgattattatgcttgtgcttgttctaatcatctttcatatgtcacctt |
40214693 |
T |
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