View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10587_low_29 (Length: 256)
Name: NF10587_low_29
Description: NF10587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10587_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 38591486 - 38591711
Alignment:
| Q |
13 |
ggagcagagaacttgcagaatgcaatatccatataaagtttaacatatattataatatgcatggtcgatagagactgtcttacttactgaaaattaagtc |
112 |
Q |
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| T |
38591486 |
ggaggagagaacttgcagaatgcaat--ccatataaagtttaacatatattataatatgcatggtagatagagactgtcttacttactgaaaattaagtt |
38591583 |
T |
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| Q |
113 |
tgagggagaaaagttaactactatatatgcataaatttatgtgaacattattaaagcatagtgtataaaataagatgagatttgaaaaggaagcatttga |
212 |
Q |
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| T |
38591584 |
tgagggagaaaagttaactactatatatgcataaatttatgtgaacattattaaagcatagtgtataaaataagatgagatttgaaaaggaagcatttga |
38591683 |
T |
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| Q |
213 |
attgaagataaaaaggaaactaagatgg |
240 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
38591684 |
attgaagataaaaaggaaactaagatgg |
38591711 |
T |
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