View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10587_low_45 (Length: 217)
Name: NF10587_low_45
Description: NF10587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10587_low_45 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 14527777 - 14527961
Alignment:
| Q |
14 |
cagagatacattcaaaagaaaagaagaggtataagatttaatagcttatctctatatttgttaataataatagcaaacctagaatatcacaccatttata |
113 |
Q |
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| T |
14527777 |
cagagatacattcaaaagaaaagaagaggtataagatttaatagcttatctctat--ttgttaataataatagcaaacctagaatatcacaccatttata |
14527874 |
T |
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| Q |
114 |
tcatcatagtaagaaattctgttttttcttttcaaagtgatacaacttatcttgcaaacaaattgtggaatcgttagcagttataac |
200 |
Q |
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| T |
14527875 |
tcatcatagtaagaaattctgttttttcttttcaaagtgctacaatttatcttgcaaacaaattgtggaatcgttagcagttataac |
14527961 |
T |
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