View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10588_12 (Length: 404)
Name: NF10588_12
Description: NF10588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10588_12 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 13798320 - 13798692
Alignment:
| Q |
1 |
aataatttattagagaatcacgaaagatggcatgatatatatatagtagacgtggttatacctaaaccaaattgttttcatcgacatannnnnnnnnnnn |
100 |
Q |
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| T |
13798320 |
aataatttattagagaatcacgaaaggtggcatgatatata----gtagacgtggttatacctaaaccaaattgtttttatcgacatgttttttatttta |
13798415 |
T |
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| Q |
101 |
nnnnnatcttaaggtttgttaagtgttatggagttaaagaaaaatatggtttttgatagaacacttttgattcatgtaacaaatacttagtggaatttat |
200 |
Q |
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| T |
13798416 |
tttttatcttaaggtttgttaagagttatggagttaaagaaaaatatggtttttcatagaacacttttgattcatgtaataaatatttagtggaatttat |
13798515 |
T |
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| Q |
201 |
atttgttcattattatgagtctattcacaaataagtgtacaacagtcacacgagtgtaatgaacggagtttaaagtctacaaacataattgagcggttca |
300 |
Q |
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| T |
13798516 |
atttgttcattattacgagtctattcacaaataagtgtacaacagtcacatgagtgtaatgaacggagtttaaagtctacaaatataattgagcggttca |
13798615 |
T |
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| Q |
301 |
aattaaacctgtaatttagatcgtaatatttaaatggtgcaatgtattgtataataaaaaacgtacaatagttacat |
377 |
Q |
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| T |
13798616 |
aattaaacctctaatttagatcgtaatatttaaatggtgcaatgtattgtataataaaaaacctacaacagttacat |
13798692 |
T |
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