View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10588_17 (Length: 335)

Name: NF10588_17
Description: NF10588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10588_17
NF10588_17
[»] chr7 (66 HSPs)
chr7 (238-335)||(10502024-10502121)
chr7 (241-324)||(17231895-17231978)
chr7 (241-324)||(17231960-17232043)
chr7 (241-324)||(14270676-14270759)
chr7 (241-324)||(17232025-17232108)
chr7 (241-324)||(8467835-8467918)
chr7 (241-324)||(17231830-17231913)
chr7 (241-324)||(8467900-8467983)
chr7 (265-324)||(14270741-14270800)
chr7 (264-335)||(15112346-15112417)
chr7 (264-335)||(15115918-15115989)
chr7 (241-323)||(16323548-16323630)
chr7 (241-335)||(15112355-15112451)
chr7 (241-335)||(15115927-15116023)
chr7 (241-323)||(10502101-10502183)
chr7 (265-335)||(6170742-6170811)
chr7 (265-335)||(9390359-9390428)
chr7 (265-335)||(17231822-17231890)
chr7 (241-335)||(9752335-9752429)
chr7 (265-335)||(14982139-14982210)
chr7 (265-335)||(6170775-6170844)
chr7 (265-335)||(8467827-8467895)
chr7 (241-314)||(9390346-9390420)
chr7 (265-335)||(16582628-16582696)
chr7 (265-335)||(25928178-25928247)
chr7 (251-311)||(16582646-16582706)
chr7 (265-324)||(2833314-2833373)
chr7 (265-335)||(8939679-8939750)
chr7 (292-335)||(14982173-14982216)
chr7 (265-335)||(15719498-15719569)
chr7 (265-335)||(15719532-15719603)
chr7 (269-335)||(6170808-6170873)
chr7 (265-311)||(10607146-10607192)
chr7 (265-330)||(31989-32054)
chr7 (265-330)||(12713804-12713869)
chr7 (265-330)||(12717628-12717693)
chr7 (265-330)||(12722539-12722604)
chr7 (290-335)||(15719490-15719535)
chr7 (290-335)||(16998073-16998118)
chr7 (290-335)||(17064620-17064665)
chr7 (267-335)||(2833157-2833223)
chr7 (265-324)||(16998081-16998141)
chr7 (265-324)||(2531124-2531183)
chr7 (265-335)||(14157551-14157622)
chr7 (241-335)||(16582668-16582762)
chr7 (241-335)||(17231862-17231955)
chr7 (241-335)||(17231927-17232020)
chr7 (241-335)||(17231992-17232085)
chr7 (265-324)||(26291369-26291428)
chr7 (252-302)||(1859847-1859897)
chr7 (269-335)||(2531040-2531105)
chr7 (265-311)||(2833212-2833258)
chr7 (270-335)||(14157585-14157651)
chr7 (294-324)||(16323536-16323566)
chr7 (265-311)||(18278259-18278305)
chr7 (265-311)||(18282222-18282268)
chr7 (265-335)||(20486908-20486976)
chr7 (288-330)||(45171222-45171264)
chr7 (23-52)||(1859711-1859740)
chr7 (290-335)||(14272845-14272890)
chr7 (265-306)||(26291336-26291377)
chr7 (290-335)||(37728296-37728341)
chr7 (265-301)||(10064337-10064373)
chr7 (241-324)||(14270709-14270792)
chr7 (265-301)||(18423282-18423318)
chr7 (265-301)||(18639839-18639875)
[»] scaffold0278 (3 HSPs)
scaffold0278 (241-324)||(6999-7082)
scaffold0278 (241-324)||(6934-7017)
scaffold0278 (265-335)||(6926-6994)
[»] scaffold0116 (4 HSPs)
scaffold0116 (241-324)||(44426-44509)
scaffold0116 (241-324)||(44491-44574)
scaffold0116 (265-335)||(44514-44582)
scaffold0116 (241-335)||(44449-44542)
[»] chr1 (44 HSPs)
chr1 (241-324)||(41306229-41306312)
chr1 (241-324)||(21740406-21740489)
chr1 (241-335)||(20315580-20315673)
chr1 (241-335)||(21740330-21740424)
chr1 (264-335)||(12271022-12271093)
chr1 (265-324)||(21740471-21740530)
chr1 (241-324)||(41306294-41306377)
chr1 (265-335)||(35982322-35982391)
chr1 (241-335)||(12271031-12271127)
chr1 (265-325)||(20315539-20315599)
chr1 (241-335)||(20315800-20315890)
chr1 (241-324)||(20315768-20315850)
chr1 (267-324)||(28195099-28195156)
chr1 (241-310)||(46383197-46383266)
chr1 (265-335)||(13883197-13883268)
chr1 (265-335)||(22357220-22357291)
chr1 (265-335)||(22358906-22358977)
chr1 (265-335)||(41306317-41306385)
chr1 (267-335)||(41801075-41801142)
chr1 (265-324)||(20229941-20230000)
chr1 (265-324)||(21406548-21406607)
chr1 (270-335)||(13883231-13883297)
chr1 (265-311)||(33796286-33796332)
chr1 (265-330)||(1009603-1009668)
chr1 (265-330)||(1926314-1926379)
chr1 (265-330)||(16376565-16376630)
chr1 (265-330)||(20925328-20925393)
chr1 (265-330)||(33796423-33796488)
chr1 (265-330)||(52634689-52634754)
chr1 (265-333)||(22131826-22131893)
chr1 (294-334)||(29764724-29764764)
chr1 (241-308)||(35982315-35982383)
chr1 (265-335)||(19209143-19209214)
chr1 (265-335)||(19209177-19209247)
chr1 (265-324)||(20229974-20230033)
chr1 (292-335)||(22357214-22357257)
chr1 (292-335)||(22358900-22358943)
chr1 (292-334)||(8881845-8881887)
chr1 (271-333)||(22131895-22131956)
chr1 (290-335)||(35982355-35982399)
chr1 (284-324)||(20315746-20315786)
chr1 (294-330)||(23072536-23072572)
chr1 (284-324)||(33796231-33796271)
chr1 (294-330)||(51326320-51326356)
[»] chr8 (34 HSPs)
chr8 (241-324)||(1323719-1323802)
chr8 (241-324)||(38550627-38550710)
chr8 (241-321)||(38550695-38550775)
chr8 (251-324)||(13428684-13428757)
chr8 (241-324)||(1323784-1323867)
chr8 (265-335)||(38550715-38550783)
chr8 (265-333)||(1323809-1323875)
chr8 (241-330)||(19879176-19879267)
chr8 (241-335)||(20983500-20983594)
chr8 (241-324)||(27472922-27473005)
chr8 (265-335)||(13428707-13428775)
chr8 (265-319)||(27472960-27473013)
chr8 (265-321)||(20983480-20983536)
chr8 (265-324)||(20983543-20983602)
chr8 (241-335)||(38550650-38550743)
chr8 (290-335)||(14103609-14103654)
chr8 (290-335)||(17461746-17461791)
chr8 (265-330)||(22110931-22110996)
chr8 (265-330)||(43250691-43250756)
chr8 (265-324)||(14398885-14398943)
chr8 (265-335)||(20459445-20459515)
chr8 (265-335)||(21917891-21917961)
chr8 (288-330)||(18863826-18863868)
chr8 (290-324)||(19801920-19801954)
chr8 (270-335)||(21917857-21917923)
chr8 (288-330)||(30941286-30941328)
chr8 (290-335)||(20453814-20453859)
chr8 (265-330)||(21973702-21973767)
chr8 (290-335)||(22238621-22238666)
chr8 (294-335)||(23477845-23477886)
chr8 (265-301)||(20046710-20046746)
chr8 (265-324)||(20453822-20453881)
chr8 (265-301)||(26219312-26219348)
chr8 (265-301)||(26225822-26225858)
[»] chr4 (45 HSPs)
chr4 (241-324)||(15481920-15482003)
chr4 (241-324)||(15481985-15482068)
chr4 (241-324)||(361520-361603)
chr4 (265-324)||(19857002-19857061)
chr4 (241-324)||(361585-361668)
chr4 (241-335)||(15189740-15189834)
chr4 (267-335)||(15189734-15189801)
chr4 (265-324)||(6190070-6190129)
chr4 (265-335)||(15482008-15482076)
chr4 (241-324)||(361650-361734)
chr4 (265-324)||(361512-361570)
chr4 (241-308)||(12423293-12423360)
chr4 (265-335)||(19856970-19857038)
chr4 (265-330)||(5757971-5758036)
chr4 (270-335)||(11480166-11480232)
chr4 (265-334)||(15876877-15876947)
chr4 (265-334)||(17994942-17995012)
chr4 (265-330)||(4562446-4562511)
chr4 (265-330)||(9555410-9555475)
chr4 (290-335)||(12841125-12841170)
chr4 (265-330)||(14758587-14758652)
chr4 (265-330)||(14955352-14955417)
chr4 (265-330)||(25688783-25688848)
chr4 (265-330)||(33741180-33741245)
chr4 (290-334)||(9922842-9922886)
chr4 (290-334)||(11480235-11480279)
chr4 (294-330)||(15007755-15007791)
chr4 (271-335)||(22634787-22634850)
chr4 (265-324)||(631582-631641)
chr4 (265-324)||(12423252-12423311)
chr4 (265-335)||(12841133-12841204)
chr4 (265-308)||(15098694-15098737)
chr4 (292-335)||(15876871-15876914)
chr4 (292-335)||(17994975-17995018)
chr4 (271-333)||(12423189-12423250)
chr4 (288-330)||(12486558-12486600)
chr4 (271-333)||(17048966-17049027)
chr4 (293-335)||(21102952-21102994)
chr4 (290-335)||(12841091-12841136)
chr4 (290-335)||(15989433-15989478)
chr4 (241-301)||(22634787-22634848)
chr4 (294-335)||(54604842-54604883)
chr4 (265-301)||(7641716-7641752)
chr4 (265-301)||(15355856-15355892)
chr4 (294-330)||(15884767-15884803)
[»] scaffold0004 (6 HSPs)
scaffold0004 (241-335)||(362191-362285)
scaffold0004 (241-324)||(362028-362111)
scaffold0004 (241-335)||(362093-362186)
scaffold0004 (265-335)||(362020-362088)
scaffold0004 (241-335)||(362158-362251)
scaffold0004 (266-324)||(362151-362209)
[»] scaffold0056 (1 HSPs)
scaffold0056 (241-324)||(79871-79954)
[»] scaffold0043 (3 HSPs)
scaffold0043 (241-324)||(9043-9126)
scaffold0043 (241-335)||(9011-9103)
scaffold0043 (265-321)||(9003-9058)
[»] scaffold0230 (5 HSPs)
scaffold0230 (238-324)||(24206-24292)
scaffold0230 (241-324)||(21276-21359)
scaffold0230 (241-324)||(24271-24354)
scaffold0230 (238-296)||(21239-21297)
scaffold0230 (238-296)||(24169-24227)
[»] chr3 (60 HSPs)
chr3 (265-335)||(49390309-49390379)
chr3 (267-335)||(18440565-18440632)
chr3 (267-335)||(19485639-19485706)
chr3 (265-335)||(14667894-14667963)
chr3 (265-335)||(18440487-18440556)
chr3 (265-335)||(19485561-19485630)
chr3 (265-324)||(11301457-11301516)
chr3 (265-324)||(14664656-14664715)
chr3 (265-334)||(22651578-22651648)
chr3 (265-324)||(5220075-5220134)
chr3 (265-324)||(14667820-14667879)
chr3 (265-335)||(16613556-16613627)
chr3 (265-335)||(22045626-22045697)
chr3 (265-335)||(24513325-24513396)
chr3 (265-311)||(11301396-11301442)
chr3 (265-335)||(12853057-12853126)
chr3 (265-335)||(14664730-14664799)
chr3 (265-330)||(16978591-16978657)
chr3 (265-330)||(7108579-7108644)
chr3 (265-330)||(7112514-7112579)
chr3 (265-330)||(11069031-11069096)
chr3 (265-330)||(11166689-11166754)
chr3 (265-330)||(14498288-14498353)
chr3 (265-330)||(15616518-15616583)
chr3 (265-330)||(22320547-22320612)
chr3 (265-330)||(22335602-22335667)
chr3 (265-330)||(28948725-28948790)
chr3 (265-330)||(30064730-30064795)
chr3 (265-330)||(55021868-55021933)
chr3 (265-309)||(12853049-12853093)
chr3 (265-335)||(8490210-8490282)
chr3 (241-288)||(15076508-15076555)
chr3 (251-302)||(15464146-15464197)
chr3 (265-335)||(22651544-22651615)
chr3 (292-335)||(24180673-24180716)
chr3 (293-335)||(11914717-11914759)
chr3 (266-324)||(15464096-15464154)
chr3 (288-330)||(15963812-15963854)
chr3 (288-330)||(15967736-15967778)
chr3 (288-330)||(15971660-15971702)
chr3 (270-335)||(16613493-16613559)
chr3 (270-335)||(22045694-22045760)
chr3 (270-335)||(14670173-14670236)
chr3 (266-314)||(14871472-14871521)
chr3 (23-52)||(15464304-15464333)
chr3 (271-324)||(16795684-16795737)
chr3 (241-301)||(18440565-18440626)
chr3 (241-301)||(19485639-19485700)
chr3 (265-302)||(21618034-21618071)
chr3 (294-335)||(22651540-22651581)
chr3 (265-306)||(27410951-27410992)
chr3 (265-302)||(36166140-36166177)
chr3 (265-301)||(6469689-6469725)
chr3 (267-311)||(14067706-14067750)
chr3 (265-301)||(15977071-15977107)
chr3 (294-330)||(16978551-16978587)
chr3 (265-301)||(28849169-28849205)
chr3 (294-330)||(43400654-43400690)
chr3 (265-301)||(45578381-45578417)
chr3 (291-335)||(49390343-49390386)
[»] scaffold0462 (4 HSPs)
scaffold0462 (265-335)||(7757-7828)
scaffold0462 (265-330)||(7651-7717)
scaffold0462 (292-335)||(7751-7794)
scaffold0462 (294-335)||(7647-7688)
[»] chr6 (36 HSPs)
chr6 (241-324)||(18319110-18319193)
chr6 (265-324)||(31630893-31630952)
chr6 (238-296)||(18319172-18319230)
chr6 (265-335)||(18913298-18913366)
chr6 (241-308)||(18913306-18913373)
chr6 (265-324)||(22075178-22075237)
chr6 (265-335)||(25621551-25621622)
chr6 (265-334)||(2200820-2200890)
chr6 (265-324)||(15174810-15174870)
chr6 (265-335)||(15874929-15875000)
chr6 (265-335)||(22075094-22075163)
chr6 (270-335)||(18927315-18927381)
chr6 (265-330)||(8242754-8242819)
chr6 (265-330)||(11565742-11565807)
chr6 (265-330)||(12620003-12620068)
chr6 (266-334)||(22420595-22420664)
chr6 (265-330)||(22947997-22948062)
chr6 (265-330)||(22951953-22952018)
chr6 (265-330)||(23870441-23870506)
chr6 (265-330)||(23874397-23874462)
chr6 (265-330)||(23988840-23988905)
chr6 (241-309)||(31630842-31630911)
chr6 (290-334)||(18927268-18927312)
chr6 (267-335)||(22075061-22075128)
chr6 (292-335)||(2200814-2200857)
chr6 (265-324)||(27555767-27555826)
chr6 (241-335)||(31630850-31630944)
chr6 (266-324)||(1643548-1643606)
chr6 (265-311)||(16623141-16623187)
chr6 (265-335)||(18918406-18918474)
chr6 (288-330)||(19869502-19869544)
chr6 (288-330)||(23393956-23393998)
chr6 (288-330)||(23413864-23413906)
chr6 (294-335)||(15174833-15174874)
chr6 (265-306)||(18953234-18953275)
chr6 (290-335)||(24266360-24266405)
[»] chr5 (28 HSPs)
chr5 (265-335)||(5889799-5889868)
chr5 (241-324)||(20912090-20912174)
chr5 (265-335)||(262659-262730)
chr5 (265-324)||(24768310-24768369)
chr5 (265-330)||(17010402-17010468)
chr5 (265-335)||(22108147-22108216)
chr5 (265-335)||(22108180-22108249)
chr5 (265-324)||(5889842-5889904)
chr5 (265-311)||(18355050-18355096)
chr5 (265-335)||(22120292-22120361)
chr5 (265-311)||(22120348-22120394)
chr5 (265-311)||(24768249-24768295)
chr5 (265-330)||(19473845-19473910)
chr5 (265-330)||(20294781-20294846)
chr5 (291-335)||(21742268-21742312)
chr5 (279-330)||(11226427-11226478)
chr5 (265-335)||(21742235-21742305)
chr5 (292-335)||(24211985-24212028)
chr5 (266-334)||(27768032-27768104)
chr5 (284-333)||(5889870-5889918)
chr5 (290-335)||(6765333-6765378)
chr5 (294-335)||(17010398-17010439)
chr5 (290-335)||(20299104-20299149)
chr5 (271-324)||(20912123-20912176)
chr5 (284-324)||(18354995-18355035)
chr5 (265-309)||(22120284-22120328)
chr5 (294-330)||(27768109-27768145)
chr5 (265-301)||(39244709-39244745)
[»] scaffold0601 (4 HSPs)
scaffold0601 (266-335)||(8537-8605)
scaffold0601 (265-324)||(8613-8672)
scaffold0601 (265-335)||(8570-8639)
scaffold0601 (265-301)||(8537-8573)
[»] scaffold1852 (1 HSPs)
scaffold1852 (265-324)||(652-711)
[»] scaffold0239 (3 HSPs)
scaffold0239 (265-335)||(22069-22140)
scaffold0239 (265-335)||(22103-22174)
scaffold0239 (290-335)||(22137-22182)
[»] scaffold0166 (2 HSPs)
scaffold0166 (265-324)||(10807-10866)
scaffold0166 (265-311)||(10746-10792)
[»] scaffold0507 (4 HSPs)
scaffold0507 (265-330)||(6487-6553)
scaffold0507 (294-335)||(6483-6524)
scaffold0507 (294-330)||(3334-3370)
scaffold0507 (294-330)||(6447-6483)
[»] scaffold0327 (3 HSPs)
scaffold0327 (265-335)||(19123-19192)
scaffold0327 (265-324)||(19049-19108)
scaffold0327 (265-335)||(19227-19296)
[»] scaffold0293 (1 HSPs)
scaffold0293 (265-335)||(21146-21215)
[»] scaffold0124 (2 HSPs)
scaffold0124 (271-335)||(25428-25491)
scaffold0124 (265-310)||(25419-25464)
[»] scaffold0486 (1 HSPs)
scaffold0486 (265-324)||(8806-8865)
[»] scaffold0380 (1 HSPs)
scaffold0380 (265-324)||(950-1009)
[»] scaffold0200 (4 HSPs)
scaffold0200 (265-324)||(11056-11115)
scaffold0200 (23-52)||(11161-11190)
scaffold0200 (267-335)||(11091-11158)
scaffold0200 (267-319)||(11124-11176)
[»] scaffold0112 (1 HSPs)
scaffold0112 (265-324)||(22228-22286)
[»] scaffold0076 (4 HSPs)
scaffold0076 (265-335)||(26847-26918)
scaffold0076 (290-335)||(26915-26960)
scaffold0076 (265-331)||(26817-26884)
scaffold0076 (265-335)||(26881-26952)
[»] chr2 (15 HSPs)
chr2 (265-335)||(27485684-27485755)
chr2 (265-334)||(20634470-20634540)
chr2 (269-334)||(21082384-21082450)
chr2 (265-330)||(10102969-10103034)
chr2 (265-330)||(24629640-24629705)
chr2 (265-330)||(27600712-27600777)
chr2 (265-330)||(30346176-30346241)
chr2 (292-335)||(13102062-13102105)
chr2 (292-335)||(20634503-20634546)
chr2 (265-335)||(27485718-27485789)
chr2 (288-330)||(41532164-41532206)
chr2 (265-330)||(27384559-27384624)
chr2 (290-335)||(27471957-27472002)
chr2 (265-324)||(34874793-34874853)
chr2 (265-301)||(45030399-45030435)
[»] scaffold0674 (2 HSPs)
scaffold0674 (265-334)||(3000-3070)
scaffold0674 (292-335)||(2994-3037)
[»] scaffold0338 (2 HSPs)
scaffold0338 (266-335)||(4528-4598)
scaffold0338 (265-335)||(4495-4565)
[»] scaffold0156 (2 HSPs)
scaffold0156 (265-330)||(15049-15115)
scaffold0156 (294-335)||(15045-15086)
[»] scaffold0028 (2 HSPs)
scaffold0028 (265-330)||(63527-63593)
scaffold0028 (294-330)||(63451-63487)
[»] scaffold0014 (1 HSPs)
scaffold0014 (266-335)||(126506-126576)
[»] scaffold0356 (1 HSPs)
scaffold0356 (290-335)||(1046-1091)
[»] scaffold0349 (1 HSPs)
scaffold0349 (265-330)||(11397-11462)
[»] scaffold0123 (2 HSPs)
scaffold0123 (265-324)||(20-80)
scaffold0123 (292-335)||(14-57)
[»] scaffold0607 (1 HSPs)
scaffold0607 (265-335)||(1950-2020)
[»] scaffold0599 (1 HSPs)
scaffold0599 (265-335)||(6434-6505)
[»] scaffold0561 (1 HSPs)
scaffold0561 (265-335)||(10115-10186)
[»] scaffold0372 (1 HSPs)
scaffold0372 (271-330)||(6180-6239)
[»] scaffold0165 (4 HSPs)
scaffold0165 (271-334)||(2886-2948)
scaffold0165 (271-334)||(6949-7011)
scaffold0165 (241-334)||(2888-2981)
scaffold0165 (241-334)||(6951-7044)
[»] scaffold0525 (1 HSPs)
scaffold0525 (265-311)||(5038-5084)
[»] scaffold0157 (1 HSPs)
scaffold0157 (288-330)||(33877-33919)
[»] scaffold0141 (1 HSPs)
scaffold0141 (288-330)||(15296-15338)
[»] scaffold0031 (1 HSPs)
scaffold0031 (265-335)||(37046-37114)
[»] scaffold0029 (1 HSPs)
scaffold0029 (265-311)||(79423-79469)
[»] scaffold0125 (1 HSPs)
scaffold0125 (290-335)||(2518-2563)
[»] scaffold0022 (2 HSPs)
scaffold0022 (290-335)||(54472-54517)
scaffold0022 (265-301)||(116005-116041)
[»] scaffold0335 (2 HSPs)
scaffold0335 (264-335)||(165-236)
scaffold0335 (264-335)||(9244-9315)
[»] scaffold0299 (1 HSPs)
scaffold0299 (24-52)||(6221-6249)
[»] scaffold0057 (1 HSPs)
scaffold0057 (294-330)||(71043-71079)
[»] scaffold0035 (1 HSPs)
scaffold0035 (241-333)||(105993-106085)
[»] scaffold0032 (1 HSPs)
scaffold0032 (265-324)||(66741-66801)
[»] scaffold0025 (1 HSPs)
scaffold0025 (265-324)||(75861-75921)
[»] scaffold0008 (1 HSPs)
scaffold0008 (265-301)||(71514-71550)


Alignment Details
Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 10502121 - 10502024
Alignment:
Q  238 tcctcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  10502121 tcctcatctcatcataatatagcaacgcatattcatcatcttatattaatataacaacaacatattcctcatctcatcataatataagcaacaacata 10502024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 17231895 - 17231978
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  17231895 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 17231978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 17231960 - 17232043
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  17231960 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 17232043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 14270759 - 14270676
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  14270759 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaaaatattcatcatctcatcataatataa 14270676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 17232025 - 17232108
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  17232025 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataacataa 17232108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 8467835 - 8467918
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  8467835 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 8467918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 17231830 - 17231913
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  17231830 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 17231913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 8467900 - 8467983
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| |  |||||||||||||| ||| |||   |||||||||||||||||||||||||||||||||||    
T  8467900 tcatctcatcataatataacaatacatattcatcatctcataataacttaacaacaacatattcatcatctcatcataatataa 8467983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 14270800 - 14270741
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  14270800 catattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 14270741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 15112346 - 15112417
Alignment:
Q  264 gcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  15112346 gcataatcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaacaacata 15112417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 15115918 - 15115989
Alignment:
Q  264 gcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  15115918 gcataatcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaacaacata 15115989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 16323548 - 16323630
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatata 323  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| ||  |  |||||||| ||||||||||||||||||    
T  16323548 tcatctcatcataatataacaacacatattcatcatcttataataatataaacatcacatattcctcatctcatcataatata 16323630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 15112355 - 15112451
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| |||||||||| ||  |||||||||||||||||| ||||| || |||||||||||| ||||||| || |||| |||||||||||||||    
T  15112355 tcatctcataataatataacaacaacatattcatcatcttataataatataagcaacaacatattaatcatcttataataacataagcaacaacata 15112451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 15115927 - 15116023
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| |||||||||| ||  |||||||||||||||||| ||||| || |||||||||||| ||||||| || |||| |||||||||||||||    
T  15115927 tcatctcataataatataacaacaacatattcatcatcttataataatataagcaacaacatattaatcatcttataataacataagcaacaacata 15116023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 10502183 - 10502101
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaat-acaacaacaacatattcatcatctcatcataatata 323  Q
    |||||||||||||||||||  || |||||||||||||||||| |||| | |||||| |||||||| ||||||||||||||||||    
T  10502183 tcatctcatcataatataataacacatattcatcatcttataataataataacaac-acatattcctcatctcatcataatata 10502101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 6170811 - 6170742
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  6170811 catattgatcatcttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 6170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 9390428 - 9390359
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||| || ||||||||| ||||||||||    
T  9390428 catattcatcatcttataataatataacaacatcatattcatcatcttataataatataa-caacaacata 9390359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 17231822 - 17231890
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  17231822 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 17231890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 9752429 - 9752335
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| |||||||||| ||  ||||||||| ||| |||| ||||| |||||||||||||||||||||  || ||||||||| ||||||||||    
T  9752429 tcatctcataataatataacaacaacatattcataatcatatagtaatataacaacaacatattcatcatcatataataatataa-caacaacata 9752335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 14982210 - 14982139
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||| ||| ||| | || ||||||||||||||||||||||| |||| |||||||||||||||    
T  14982210 catattcatcatctcataataacataagcaacaacatattcatcatctcataataacataagcaacaacata 14982139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 6170844 - 6170775
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||  ||||||||||||| ||||||| || ||||||||| ||||||||||    
T  6170844 catattcatcatcttataataatatgacaacaacatattgatcatcttataataatataa-caacaacata 6170775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 8467827 - 8467895
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  8467827 catagtcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 8467895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 9390420 - 9390346
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcat 314  Q
    |||||| || |||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  9390420 tcatcttataataatataacaacatcatattcatcatcttataataatataacaacaacatattcatcatatcat 9390346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 16582628 - 16582696
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  16582628 catattcatcgtcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 16582696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 25928247 - 25928178
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  25928247 catattcatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataa-caacaacata 25928178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 16582646 - 16582706
Alignment:
Q  251 ataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||| |||||    
T  16582646 ataatacaacaacacatattcatcatcttataataatataacaacaacatattcaccatct 16582706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 2833373 - 2833314
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  2833373 catattaatcatcttataataatataacaacaacatatacatcatctcgccataatataa 2833314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 8939679 - 8939750
Alignment:
Q  265 catattcatcatcttatattaatacaacaa-caacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||| | || || ||||||||||||||||| || |||| |||||||||||||||    
T  8939679 catattcatcatcttataataacataagaaacaacatattcatcatcttataataacataagcaacaacata 8939750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 14982216 - 14982173
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  14982216 caacaacatattcatcatctcataataacataagcaacaacata 14982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 15719498 - 15719569
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||| ||| ||||| || |||||||||| ||||||||| || ||||||||||||||||||||    
T  15719498 cataatcatcatctcataataatataaacaacaacataatcatcatcttataataatataagcaacaacata 15719569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 15719532 - 15719603
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| ||||| || |||||||||||| ||||||| || ||||||||| ||||||||||    
T  15719532 cataatcatcatcttataataatataagcaacaacatatttatcatcttataataatataaacaacaacata 15719603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 6170873 - 6170808
Alignment:
Q  269 ttcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||| |||||  ||||||||||||||||||||| || ||||||| | ||||||||||    
T  6170873 ttcatcatcttataataatatgacaacaacatattcatcatcttataataatatga-caacaacata 6170808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 10607192 - 10607146
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  10607192 catattcatcattttataataatataacaacaacatattcatcatct 10607146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 31989 - 32054
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  31989 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 32054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 12713804 - 12713869
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  12713804 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12713869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 12717628 - 12717693
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  12717628 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12717693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 12722539 - 12722604
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  12722539 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12722604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 15719490 - 15719535
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||    
T  15719490 aacaacaacataatcatcatctcataataatataaacaacaacata 15719535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 16998073 - 16998118
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||    
T  16998073 aacaacaacataatcatcatcttataataatataagcaacaacata 16998118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 17064665 - 17064620
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||    
T  17064665 aacaacaacataatcatcatctcatgataatataaacaacaacata 17064620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 2833223 - 2833157
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||  |||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  2833223 tattcatcatcttataa-aatataacaacaacatattcatcatcttataaaaatataa-caacaacata 2833157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 16998081 - 16998141
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||| ||||||||||||| ||||| || |||||||||||||||||||| || |||||||||    
T  16998081 cataatcatcatcttataataatataagcaacaacatattcatcatcttataataatataa 16998141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 2531183 - 2531124
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| || || || |||||||||| ||||||||| |||||||||||    
T  2531183 catattaatcatcttataatagtataataacaacatatacatcatctcgtcataatataa 2531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 14157622 - 14157551
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||| ||||||||| ||| | || ||||||||||||| |||||| || |||| |||||||||||||||    
T  14157622 catattcaccatcttataataacataagcaacaacatattcttcatcttataataacataagcaacaacata 14157551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 16582668 - 16582762
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||| |||||||||  |||| |||||||||||| ||||||| | || ||||||||| ||||||||||    
T  16582668 tcatcttataataatataacaacaacatattcaccatcttatagaaatataacaacaacatactcatcattttataataatataa-caacaacata 16582762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 17231862 - 17231955
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||| ||  ||||| |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  17231862 tcatcttataataatataacaacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataa-caacaacata 17231955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 17231927 - 17232020
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||| ||  ||||| |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  17231927 tcatcttataataatataacaacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataa-caacaacata 17232020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 17231992 - 17232085
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||| ||  ||||| |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  17231992 tcatcttataataatataacaacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataa-caacaacata 17232085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 26291369 - 26291428
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||  ||||||||||||| ||||||||| |||||||||||| || | |||||||    
T  26291369 catattcattttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 26291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 1859897 - 1859847
Alignment:
Q  252 taatataacgacgcatattcatcatcttatattaatacaacaacaacatat 302  Q
    ||||||||| || ||||||||||||| |||| ||||| |||||||||||||    
T  1859897 taatataacaacacatattcatcatcatatagtaatataacaacaacatat 1859847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 2531105 - 2531040
Alignment:
Q  269 ttcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| ||||||||||||| ||||||||| || ||||||||| || | ||||||| ||||||||||    
T  2531105 ttcatcttcttatattaatataacaacaacgtaatcatcatcttatgaaaatataa-caacaacata 2531040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 2833258 - 2833212
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||| ||||| ||||||||| ||||||||||||    
T  2833258 catattcatcttcttataataatataacaacaacgtattcatcatct 2833212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 14157651 - 14157585
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||| ||| | || |||||||||||||| ||||| || |||| |||||||||||||||    
T  14157651 tcatcatcttataataacataagcaacaacatattcaccatcttataataacataagcaacaacata 14157585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 16323536 - 16323566
Alignment:
Q  294 acaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||||||||||||||    
T  16323536 acaacatattcatcatctcatcataatataa 16323566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 18278259 - 18278305
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||||    
T  18278259 catattcatcttcttatattaatataacaacaatgtattcatcatct 18278305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 18282222 - 18282268
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||||    
T  18282222 catattcatcttcttatattaatataacaacaatgtattcatcatct 18282268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 20486908 - 20486976
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||  |||| | |||||||||||||||||||| || | ||||||| ||||||||||    
T  20486908 catattcatcatcttataaaaatata-caacaacatattcatcatcttataaaaatataa-caacaacata 20486976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 45171264 - 45171222
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  45171264 acaacaacaacatattcatcatcttatcaaaatataatcaaca 45171222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Complemental strand, 1859740 - 1859711
Alignment:
Q  23 catcatcacataataacttagaccacacaa 52  Q
    ||||||||||||||||||||||||||||||    
T  1859740 catcatcacataataacttagaccacacaa 1859711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 14272845 - 14272890
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||| | ||||||||| ||||||||||    
T  14272845 aacaacaacataatcatcatctcgtaataatataaacaacaacata 14272890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 26291336 - 26291377
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcat 306  Q
    |||||||||||| ||||| ||||| |||||||||||||||||    
T  26291336 catattcatcattttataataatataacaacaacatattcat 26291377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 37728341 - 37728296
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  37728341 aacaaccacatattcatcatcttataataatataaacaacaacata 37728296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 10064373 - 10064337
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  10064373 catattcatcatcttatattgatataacaacaacata 10064337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 14270792 - 14270709
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||||||| ||  |||||||||||||| ||  ||||| |||||| ||||||||||||||| || |||||||||    
T  14270792 tcatcttataataatataacaacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataa 14270709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 18423282 - 18423318
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  18423282 catattcatcatcttatattgatataacaacaacata 18423318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 18639839 - 18639875
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  18639839 catattcatcatcttatattgatataacaacaacata 18639875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 6999 - 7082
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6999 tcatctcatcataatataacaacacatattcatcatcttataataatacaacaacaacatattcatcatctcatcataatataa 7082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 6934 - 7017
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  6934 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 6926 - 6994
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  6926 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 44509 - 44426
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  44509 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 44426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 44574 - 44491
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  44574 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 44491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 44582 - 44514
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  44582 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 44514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 44542 - 44449
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||| ||  ||||| |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  44542 tcatcttataataatataacaacaacatattcatcatctcatcataatataacaac-acatattcatcatcttataataatataa-caacaacata 44449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 41306312 - 41306229
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  41306312 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 41306229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 21740489 - 21740406
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21740489 tcatctcatcataatataacaacacatatttatcatcttataataatataacaacaacatattcatcatctcatcataatataa 21740406  T

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Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 20315580 - 20315673
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||||  || |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20315580 tcatctcatcgtaatataagaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa-caacaacata 20315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 21740424 - 21740330
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| | ||||||||    
T  21740424 tcatctcatcataatataacaacacatatttatcatcttataataatataacaacaacatattcatcatctcataataatataaacgacaacata 21740330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 12271022 - 12271093
Alignment:
Q  264 gcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  12271022 gcataatcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaacaacata 12271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 21740530 - 21740471
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  21740530 catattcatcatcttataataatataacaacaacgtattcatcatctcatcataatataa 21740471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 41306377 - 41306294
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| || || |||||||||||||| ||||||||||||||||||||    
T  41306377 tcatcttataataatacaacaacacatattcatcatcttataatagtataacaacaacatattaatcatctcatcataatataa 41306294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 35982391 - 35982322
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  35982391 catattcatcatcttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 35982322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 12271031 - 12271127
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| |||||||||| ||  |||||||||||||||||| ||||| || |||||||||||| ||||||| || |||| |||||||||||||||    
T  12271031 tcatctcataataatataacaacaacatattcatcatcttataataatataagcaacaacatattaatcatcttataataacataagcaacaacata 12271127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 20315539 - 20315599
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataag 325  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||    
T  20315539 catattcatcatcttaaaataatataacaacaacatattcatcatctcatcgtaatataag 20315599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 20315800 - 20315890
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| || |||||||||||||||||| ||||   | |||||||||||||||||||||||| ||||||| ||||||||||    
T  20315800 tcatcttataataatataacaacacatattcatcatcttataataat---ataacaacatattcatcatctcatcaaaatataa-caacaacata 20315890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 20315768 - 20315850
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||| ||||| ||||||||| || |||||||||||||||||| ||||| |||||| ||||||||||||||| || |||||||||    
T  20315768 tcatatcatcgtaatataacaacacatattcatcatcttataataatataacaac-acatattcatcatcttataataatataa 20315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 28195156 - 28195099
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| || |||||||||    
T  28195156 tattcatcatcttataataatataacaacaacatattcatcatcttataataatataa 28195099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 46383266 - 46383197
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatc 310  Q
    |||||||||||||||||||| || |||||||||||||| ||| |||   |||||||||||||||||||||    
T  46383266 tcatctcatcataatataactacacatattcatcatctcataataacttaacaacaacatattcatcatc 46383197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 13883268 - 13883197
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| || |||||||||| |||| ||||||| ||||||||| ||||||||||    
T  13883268 catattcatcatcttataataatataaacaacaacataatcattatctcataataatataaacaacaacata 13883197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 22357220 - 22357291
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||| | || |||||||||||||||||||| || |||| |||||||||||||||    
T  22357220 catattcatcatcttataataaaataagcaacaacatattcatcatcttataataacataagcaacaacata 22357291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 22358906 - 22358977
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||| | || |||||||||||||||||||| || |||| |||||||||||||||    
T  22358906 catattcatcatcttataataaaataagcaacaacatattcatcatcttataataacataagcaacaacata 22358977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 41306385 - 41306317
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||| ||||| ||||||||||    
T  41306385 catattcatcatcttataataatacaacaac-acatattcatcatcttataatagtataa-caacaacata 41306317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 41801142 - 41801075
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||  |||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  41801142 tattcatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataa-caacaacata 41801075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 20230000 - 20229941
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| || | |||||||    
T  20230000 catattcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 20229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 21406548 - 21406607
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| || | |||||||    
T  21406548 catattcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 21406607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 13883297 - 13883231
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||| ||| | || |||||||||||||||||||| || ||||||||| ||||||||||    
T  13883297 tcatcatcttataataacataagcaacaacatattcatcatcttataataatataaacaacaacata 13883231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 33796286 - 33796332
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  33796286 catattcatcttcttatattaatataacaacaacgtattcatcatct 33796332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 1009603 - 1009668
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  1009603 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 1009668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 1926379 - 1926314
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  1926379 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 1926314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 16376630 - 16376565
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  16376630 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 16376565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 20925393 - 20925328
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  20925393 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 20925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 33796423 - 33796488
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||| ||||| ||||| ||||||||||||| |||||||| || | ||||||| |||||    
T  33796423 catattcatcattttataataatataacaacaacatatacatcatcttataaaaatataatcaaca 33796488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 52634689 - 52634754
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  52634689 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 52634754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 22131893 - 22131826
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    |||||||||||| ||||| ||||| ||||||||||| |||||||| | || ||||||||| ||||||||    
T  22131893 catattcatcattttataataatataacaacaacatgttcatcattttataataatataa-caacaaca 22131826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 29764764 - 29764724
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  29764764 acaacataatcatcatctcataataatataagcaacaacat 29764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 35982383 - 35982315
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatca 308  Q
    |||||| || |||||||||| ||  |||||||||||||||||| ||||| |||||||||||| ||||||    
T  35982383 tcatcttataataatataacaacaacatattcatcatcttataataatataacaacaacataatcatca 35982315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19209143 - 19209214
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||| |||| ||||  || |||||||||| ||||||||| || ||||||||| ||||||||||    
T  19209143 catattcatcatcatataataatgtaaacaacaacataatcatcatcttataataatataaacaacaacata 19209214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19209177 - 19209247
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||| || |||||||    
T  19209177 cataatcatcatcttataataatataaacaacaacatat-catcatctcataataatataaacagcaacata 19209247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 20230033 - 20229974
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||| ||||| ||||| |||||||||||||||||| ||| ||  ||||||||    
T  20230033 catattcatcattttataataatataacaacaacatattcatcttcttatattaatataa 20229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 22357214 - 22357257
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  22357214 caacaacatattcatcatcttataataaaataagcaacaacata 22357257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 22358900 - 22358943
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  22358900 caacaacatattcatcatcttataataaaataagcaacaacata 22358943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 8881845 - 8881887
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||||||||| || ||||||||| |||||||||    
T  8881845 caacaacatattcatcatcttataataatataaacaacaacat 8881887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 22131956 - 22131895
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    |||||||||||| ||||| |||||||||||||||| ||| | || ||||||||| ||||||||    
T  22131956 catcatcttataataatataacaacaacatattcaccattttataataatataa-caacaaca 22131895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 35982399 - 35982355
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||    
T  35982399 aacaacaacatattcatcatcttataataatataa-caacaacata 35982355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 20315746 - 20315786
Alignment:
Q  284 taatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||| |||||||||||||||||||| ||||| ||||||||    
T  20315746 taatataacaacaacatattcatcatatcatcgtaatataa 20315786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 23072536 - 23072572
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  23072536 acaacataatcatcatctcataataatataagcaaca 23072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 33796231 - 33796271
Alignment:
Q  284 taatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  33796231 taatataacaacaacatatacatcatctcgtcataatataa 33796271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 51326320 - 51326356
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  51326320 acaacataatcatcatctcataataatataagcaaca 51326356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 1323802 - 1323719
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  1323802 tcatctcatcataatataacaacacatattcatcatcttataataatataacaacaacatattcatcatttcatcataatataa 1323719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 38550710 - 38550627
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||| ||| || |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||    
T  38550710 tcatctcatcataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcaaaatataa 38550627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 38550775 - 38550695
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataata 321  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  38550775 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataata 38550695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 13428757 - 13428684
Alignment:
Q  251 ataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||| || |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  13428757 ataatacaacaacacatattcatcatcttataataatatagcaacaacatattcatcatctcatcataatataa 13428684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 1323867 - 1323784
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  1323867 tcatcttataataatacaacaacacatattcatcatcttataataatatagcaacaacaaattcatcatctcatcataatataa 1323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 38550783 - 38550715
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  38550783 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 38550715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 1323875 - 1323809
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||| ||||||||||    
T  1323875 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatat-agcaacaaca 1323809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 19879176 - 19879267
Alignment:
Q  241 tcatctcatcataatataa-cgacgcatattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    ||||||| | ||||||||| | || |||||||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||| |||||    
T  19879176 tcatctcctaataatataagcaacacatattcatcatcttataataatataaacaacaacataatcatcatctcataataatataaacaaca 19879267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 20983594 - 20983500
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||||||| ||||| |||| |||||||||| |||||| || ||||||||| ||||||||||    
T  20983594 tcatcttataataatataaccacaacatattcatcatcttataataatataacatcaacatattcctcatcttataataatataa-caacaacata 20983500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 27473005 - 27472922
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||| ||| |||   ||||||||||||||||||||||| |||||||||||    
T  27473005 tcatcttataataatacaacaacacatattcatcatctcataataacttaacaacaacatattcatcatctcgtcataatataa 27472922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 13428775 - 13428707
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||| || ||||||| ||||||||||||    
T  13428775 catattcatcattttataataatacaacaac-acatattcatcatcttataataatat-agcaacaacata 13428707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 27473013 - 27472960
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataa 319  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  27473013 catattcatcatcttataataatacaacaac-acatattcatcatctcataataa 27472960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 20983536 - 20983480
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataata 321  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||| || ||||||    
T  20983536 catattcctcatcttataataatataacaacaacatattcatcatcttataataata 20983480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 20983602 - 20983543
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||| |||||||||||||||||| || |||||||||    
T  20983602 catatttatcatcttataataatataaccacaacatattcatcatcttataataatataa 20983543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 38550743 - 38550650
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||| ||  |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  38550743 tcatcttataataatataacaacaacatattcatcatctcatcataatacaacaac-acatattcatcatcttataataatataa-caacaacata 38550650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 14103654 - 14103609
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||    
T  14103654 aacaacaacatattcatcatctcataataacataaacaacaacata 14103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 17461791 - 17461746
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||    
T  17461791 aacaacaacataatcatcatctcataataatataaacaacaacata 17461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 22110931 - 22110996
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  22110931 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22110996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 43250691 - 43250756
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  43250691 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 43250756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 14398943 - 14398885
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||| ||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  14398943 catattaatcatct-ataataatataacaacaacatatacatcatctcgtcataatataa 14398885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 20459445 - 20459515
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||| ||||||||| ||||| || ||||||||||| ||||||||||| ||||||||| ||||||||||    
T  20459445 cataatcagcatcttataataatataaacaacaacatat-catcatctcataataatataaacaacaacata 20459515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 21917961 - 21917891
Alignment:
Q  265 catattcatcatcttatattaat-acaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||   |||||||||| | |||||||||||| ||||||||| ||||||||||    
T  21917961 catattcatcatcttataataatgtaaacaacaaca-aatcatcatctcataataatataaacaacaacata 21917891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 18863868 - 18863826
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  18863868 acaacaacaacatattcatcatcttatcaaaatataatcaaca 18863826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 19801954 - 19801920
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||| ||||||||||||||||||||||||    
T  19801954 aacaacaacacattcatcatctcatcataatataa 19801920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 21917923 - 21917857
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| ||| ||||| || |||||||||| ||||||||| || ||||||||| ||||||||||    
T  21917923 tcatcatctcataataatataaacaacaacataatcatcatcttataataatataaacaacaacata 21917857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 30941328 - 30941286
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  30941328 acaacaacaacatattcatcatcttatcaaaatataatcaaca 30941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 20453814 - 20453859
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||||||| || ||||||||| ||||||||||    
T  20453814 aacaacaacataatcatcatcttataataatataaacaacaacata 20453859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 21973767 - 21973702
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||  |||||||||||| || | ||||||| |||||    
T  21973767 catattcatcttcttgtattaatataacaacaaggtattcatcatcttatgaaaatataatcaaca 21973702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 22238666 - 22238621
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||    
T  22238666 aacaacaacataatcatcatctaataataacataagcaacaacata 22238621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 23477845 - 23477886
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  23477845 acaacatattcatcatcttataataatataaacaacaacata 23477886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 20046746 - 20046710
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  20046746 catattcatcatcttatattgatataacaacaacata 20046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 20453822 - 20453881
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||| ||||||||||||| ||||| || ||||||||||| ||||||||||| |||||||||    
T  20453822 cataatcatcatcttataataatataaacaacaacatat-catcatctcataataatataa 20453881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 26219312 - 26219348
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  26219312 catattcatcatcttatattgatataacaacaacata 26219348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 26225858 - 26225822
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  26225858 catattcatcatcttatattgatataacaacaacata 26225822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 15482003 - 15481920
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  15482003 tcatctcatcataatataacaacacatatttatcatcttataataatataacaacaacatattcatcatctcatcataatataa 15481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 15482068 - 15481985
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  15482068 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 15481985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 361520 - 361603
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  361520 tcatcttataataatacaacaacacatattcatcatcttataataatataacagcaacatattcatcatctcatcataatataa 361603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 19857002 - 19857061
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  19857002 catattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 19857061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 361585 - 361668
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||||| || |||||||||||||| ||| |||   || |||||||||||||||||||| |||||||||||    
T  361585 tcatctcatcataatataacaacacatattcatcatctcataataacttaaaaacaacatattcatcatctcgtcataatataa 361668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 15189740 - 15189834
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  15189740 tcatcttataataatataacaacaacatattcatcatcttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 15189834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 15189734 - 15189801
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  15189734 tattcatcatcttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 15189801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 6190070 - 6190129
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  6190070 catattcatcatcttataataatataaccacaacacattcatcatctcatcataatataa 6190129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 15482076 - 15482008
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  15482076 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 15482008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 361650 - 361734
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaa-tacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||||| |||||||||||| || |||||| ||||||| ||| ||| |  ||||||||||||||||||||||| |||||||||||    
T  361650 tcatctcgtcataatataacaacacatatttatcatctcataataacttaaacaacaacatattcatcatctcgtcataatataa 361734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 361512 - 361570
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || |||||||||    
T  361512 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa 361570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 12423293 - 12423360
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatca 308  Q
    |||||||||||||||||||| ||  |||||||||| |||| | ||||| |||||||||||||||||||    
T  12423293 tcatctcatcataatataacaacatatattcatcaacttacaataatataacaacaacatattcatca 12423360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19856970 - 19857038
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||| || ||||||||| ||||||||||    
T  19856970 catattcatcatcttataataatactacaac-acatattcatcatcttataataatataa-caacaacata 19857038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 5758036 - 5757971
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||| || | ||||||| |||||    
T  5758036 catattcatcttcttgtattaatataacaacaacatattcatcatcttatgaaaatataatcaaca 5757971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 11480232 - 11480166
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||| | || |||||||||||||||||||| || |||  |||||||||||||||    
T  11480232 tcatcatcttatattaacataagcaacaacatattcatcatcttataatatcataagcaacaacata 11480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 15876877 - 15876947
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||||||| ||| | || ||||||||||||||| |||| || ||||||||| |||||||||    
T  15876877 catattcatcatcttataataacataagcaacaacatattcataatcttataataatataaacaacaacat 15876947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 17995012 - 17994942
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||||||| ||| | || |||||||||||||||||| | || ||||||||| |||||||||    
T  17995012 catattcatcatcttataataacataagcaacaacatattcatcattttataataatataaacaacaacat 17994942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 4562511 - 4562446
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  4562511 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 4562446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 9555410 - 9555475
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  9555410 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 9555475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 12841125 - 12841170
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||    
T  12841125 aacaacaacataatcatcatctcataataatataaacaacaacata 12841170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 14758652 - 14758587
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  14758652 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 14758587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 14955417 - 14955352
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  14955417 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 14955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 25688783 - 25688848
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  25688783 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 25688848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 33741180 - 33741245
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  33741180 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 33741245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 9922842 - 9922886
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||    
T  9922842 aacaacaacataatcatcatctcataataatataaacaacaacat 9922886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 11480279 - 11480235
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||    
T  11480279 aacaacaacataatcatcatctcataataatataaacaacaacat 11480235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 15007755 - 15007791
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15007755 acaacatattcatcatctcataataatataagcaaca 15007791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 22634850 - 22634787
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||| ||| ||||| |||||||||||||||||||||  || ||||||||| ||||||||||    
T  22634850 catcatctcataataatataacaacaacatattcatcatcatataataatataa-caacaacata 22634787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 631641 - 631582
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||| | ||||| ||||| |||||||||||||||||||| | || |||||||||    
T  631641 catattcatctttttataataatataacaacaacatattcatcattttataataatataa 631582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 12423252 - 12423311
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||||||||||||||||   ||| ||||| | |||| ||||||||||||||||||||||    
T  12423252 catattcatcatcttataaatatataacaaaagcataatcatcatctcatcataatataa 12423311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 12841133 - 12841204
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||| ||| ||||| || |||||||||||| ||||||| || ||||||||| ||||||||||    
T  12841133 cataatcatcatctcataataatataaacaacaacatatttatcatcttataataatataaacaacaacata 12841204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 15098694 - 15098737
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatca 308  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||    
T  15098694 catattcatcatcttataataatataacaacaacataatcatca 15098737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 15876871 - 15876914
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  15876871 caacaacatattcatcatcttataataacataagcaacaacata 15876914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 17995018 - 17994975
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  17995018 caacaacatattcatcatcttataataacataagcaacaacata 17994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 12423189 - 12423250
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    |||| ||||||| ||||| |||||||||||||||||||| | || ||||||||| ||||||||    
T  12423189 catcgtcttataataatataacaacaacatattcatcattttataataatataa-caacaaca 12423250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 12486558 - 12486600
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  12486558 acaacaacaacatattcatcatcttatcaaaatataatcaaca 12486600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 17049027 - 17048966
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    |||||||||||| ||||| ||||||||||| |||||||| | || ||||||||| ||||||||    
T  17049027 catcatcttataataatataacaacaacatgttcatcattttataataatataa-caacaaca 17048966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 21102994 - 21102952
Alignment:
Q  293 aacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||| || |||| |||||||||||||||    
T  21102994 aacaacatattcatcatcttataataacataagcaacaacata 21102952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 12841091 - 12841136
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||| ||||||| ||||||||| ||||||||||    
T  12841091 aacaacaacataatcattatctcataataatataaacaacaacata 12841136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 15989433 - 15989478
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||||| || ||||||||| || |||||||    
T  15989433 aacaacaacatattcatcatcttataataatataaacagcaacata 15989478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 22634848 - 22634787
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacata 301  Q
    ||||||||| |||||||||| ||  ||||||||||||| |||| ||||| ||||||||||||    
T  22634848 tcatctcataataatataacaacaacatattcatcatcatataataatataacaacaacata 22634787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 54604842 - 54604883
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||| |||||||||||| ||||||||| ||||||||||    
T  54604842 acaacataatcatcatctcataataatataaacaacaacata 54604883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 7641752 - 7641716
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  7641752 catattcatcatcttatattgatataacaacaacata 7641716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 15355892 - 15355856
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  15355892 catattcatcatcttatattgatataacaacaacata 15355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 15884803 - 15884767
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  15884803 acaacataatcatcatctcataataatataagcaaca 15884767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 6e-25; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 362191 - 362285
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| |||||||||| || |||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| | ||||||||    
T  362191 tcatctcataataatataacaacacatatttatcatcttataataatataacaacaacatattcatcatctcataataatataaacgacaacata 362285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 362028 - 362111
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  362028 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatttcatcataatataa 362111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 362093 - 362186
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||||| || |||||| ||||||||| | ||| | |||||||| |||||||||||||||||||||||||| ||||||||||    
T  362093 tcatttcatcataatataacaacacatatttatcatcttagaataacataacaacaaaatattcatcatctcatcataatataa-caacaacata 362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 362020 - 362088
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  362020 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 362088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 362158 - 362251
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| ||  |||||||||||||| ||| ||||| |||||| ||||||| ||||||| || ||||||||| ||||||||||    
T  362158 tcatctcatcataatataacaacaacatattcatcatctcataataatataacaac-acatatttatcatcttataataatataa-caacaacata 362251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 362151 - 362209
Alignment:
Q  266 atattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||||| |||||||||    
T  362151 atattcatcatctcatcataatataacaacaacatattcatcatctcataataatataa 362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 79954 - 79871
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||||||| |||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||    
T  79954 tcatctcataataatataacaacacatattcatcatcttataataatataacaataacatattcatcatctcgtcataatataa 79871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 9043 - 9126
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  9043 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatcatctcatcataatataa 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 9011 - 9103
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||| ||| || |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  9011 tcatcttataataatacaacaacacatattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 9103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 9003 - 9058
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataata 321  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||    
T  9003 catattcatcatcttataataatacaacaac-acatattcatcatcttataataata 9058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 24292 - 24206
Alignment:
Q  238 tcctcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||||||||||||||||||||| || |||| | |||||||||||  |||| ||||||| ||||||| |||||||||||||||||||    
T  24292 tcctcatctcatcataatataacaacacatacttatcatcttataacaatataacaacatcatattcctcatctcatcataatataa 24206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 21359 - 21276
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||| |||||||||| ||| || |||||||||||||||||| ||||| ||| ||| ||||||| |||||||||||||||||||    
T  21359 tcatcacatcataatacaacaacacatattcatcatcttataataatataactacatcatattcctcatctcatcataatataa 21276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 24354 - 24271
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||| ||||| |||||||| || ||||| |||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||    
T  24354 tcatcacatcaaaatataacaacacatatacatcatcttataataatataacaacatcatattcctcatctcatcataatataa 24271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 21297 - 21239
Alignment:
Q  238 tcctcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaaca 296  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||    
T  21297 tcctcatctcatcataatataacaacacatattcatcatcttatagtaatataacaaca 21239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 24227 - 24169
Alignment:
Q  238 tcctcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaaca 296  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||    
T  24227 tcctcatctcatcataatataacaacacatattcatcatcttatagtaatataacaaca 24169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 49390379 - 49390309
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||| ||||||||||||    
T  49390379 catattcatcatcttataataatataacaacaacatattcatcatcttataataatatgagcaacaacata 49390309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 18440632 - 18440565
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  18440632 tattcatcatcttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 18440565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 19485706 - 19485639
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  19485706 tattcatcatcttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 19485639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 14667894 - 14667963
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  14667894 catattcatcttcttatattaatataacaacaacatattcatcatcttataaaaatataa-caacaacata 14667963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 18440556 - 18440487
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||||| ||||||||||    
T  18440556 catattcatcatcttataataatatagcaacaacatattcatcatcttataataatataa-caacaacata 18440487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 19485630 - 19485561
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||||| ||||||||||    
T  19485630 catattcatcatcttataataatatagcaacaacatattcatcatcttataataatataa-caacaacata 19485561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 11301516 - 11301457
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  11301516 catattaatcatcttataataatataacaacaacatatacatcatctcgtcataatataa 11301457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 14664656 - 14664715
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  14664656 catattaatcatcttataataatataacaacaacatatacatcatctcgtcataatataa 14664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 22651578 - 22651648
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||| | |||||||    
T  22651578 cataatcatcatcttataataatataaacaacaacatattcatcatctcataataatataaacgacaacat 22651648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 5220075 - 5220134
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| || |||||||||| ||||||||| |||||||||||    
T  5220075 catattaatcatcttataataatataataacaacatatacatcatctcgtcataatataa 5220134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 14667820 - 14667879
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||    
T  14667820 catattaatcatcttataataatataacaacaacatatacatcatcttgtcataatataa 14667879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 16613556 - 16613627
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||| |||||| ||||| || |||||| ||| |||||||||||| ||||||||| ||||||||||    
T  16613556 catattcatcagcttataataatataaacaacaatataatcatcatctcataataatataaacaacaacata 16613627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22045697 - 22045626
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||| |||||| ||||| || |||||| ||| |||||||||||| ||||||||| ||||||||||    
T  22045697 catattcatcagcttataataatataaacaacaatataatcatcatctcataataatataaacaacaacata 22045626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 24513325 - 24513396
Alignment:
Q  265 catattcatcatcttatattaatacaacaa-caacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||| | || || ||||||||||||||||| || |||| |||||||||||||||    
T  24513325 catattcatcatcttataataacataagaaacaacatattcatcatcttataataacataagcaacaacata 24513396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 11301442 - 11301396
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  11301442 catattcatcttcttatattaatataacaacaacgtattcatcatct 11301396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 12853126 - 12853057
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| | ||| ||||| |||||||||||||||||||| | || ||||||||| ||||||||||    
T  12853126 catattcatcatttaatagtaatataacaacaacatattcatcattttataataatataa-caacaacata 12853057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 14664730 - 14664799
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||||||| || | ||||||| ||||||||||    
T  14664730 catattcatcttcttatattaatataacaaaaacgtattcatcatcttataaaaatataa-caacaacata 14664799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 16978591 - 16978657
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||| ||||| || ||| |||||| |||||||||||| ||||||||| |||||    
T  16978591 catattcatcatcttataataatataaacaataacataatcatcatctcataataatataaacaaca 16978657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 7108579 - 7108644
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  7108579 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 7108644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 7112514 - 7112579
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  7112514 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 7112579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 11069031 - 11069096
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  11069031 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11069096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 11166754 - 11166689
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  11166754 catattcatcctcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11166689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 14498288 - 14498353
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  14498288 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 14498353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 15616518 - 15616583
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  15616518 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 15616583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 22320547 - 22320612
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  22320547 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22320612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 22335602 - 22335667
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  22335602 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22335667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 28948725 - 28948790
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  28948725 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 28948790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 30064730 - 30064795
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  30064730 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 30064795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 55021868 - 55021933
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  55021868 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 55021933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 12853093 - 12853049
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcat 309  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||    
T  12853093 catattcatcattttataataatataacaacaacatattcatcat 12853049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 8490282 - 8490210
Alignment:
Q  265 catattcatcatcttatattaata---caacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||| |||||   ||||||||||||||||||||| | || ||||||||| ||||||||||    
T  8490282 catattcatcattttataataatataacaacaacaacatattcatcattttataataatataa-caacaacata 8490210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 15076555 - 15076508
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaata 288  Q
    |||||||||||||||||||  || |||||||||||||||||| |||||    
T  15076555 tcatctcatcataatataataacacatattcatcatcttataataata 15076508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 15464146 - 15464197
Alignment:
Q  251 ataatataacgacgcatattcatcatcttatattaatacaacaacaacatat 302  Q
    |||||||||| || ||||||||||||| |||| ||||| |||||||||||||    
T  15464146 ataatataacaacacatattcatcatcatatagtaatataacaacaacatat 15464197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 22651544 - 22651615
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||| ||| ||||| || |||||||||| ||||||||| || ||||||||| ||||||||||    
T  22651544 cataatcatcatctcataataatataaacaacaacataatcatcatcttataataatataaacaacaacata 22651615  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 24180716 - 24180673
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  24180716 caacaacatattcatcatcttataataacataagcaacaacata 24180673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 11914759 - 11914717
Alignment:
Q  293 aacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||| || |||| |||||||||||||||    
T  11914759 aacaacatattcatcatcttataataacataagcaacaacata 11914717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 15464096 - 15464154
Alignment:
Q  266 atattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||| |||| ||||| |||||||||||||||||| ||  || |||||||||    
T  15464096 atattcatcatcatatagtaatataacaacaacatattcatcgtcatataataatataa 15464154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 15963812 - 15963854
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  15963812 acaacaacaacatattcatcatcttatcaaaatataatcaaca 15963854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 15967736 - 15967778
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  15967736 acaacaacaacatattcatcatcttatcaaaatataatcaaca 15967778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 15971660 - 15971702
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  15971660 acaacaacaacatattcatcatcttatcaaaatataatcaaca 15971702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 16613493 - 16613559
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| ||| ||||| || |||||||||| ||||||||| || |||| |||||||||||||||    
T  16613493 tcatcatctcataataatataaacaacaacataatcatcatcttataataacataagcaacaacata 16613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 22045760 - 22045694
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||| ||| ||||| || |||||||||| ||||||||| || |||| |||||||||||||||    
T  22045760 tcatcatctcataataatataaacaacaacataatcatcatcttataataacataagcaacaacata 22045694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 14670173 - 14670236
Alignment:
Q  270 tcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||| ||||| | ||||||| |||||||||||| |||| ||||||| ||||||||||    
T  14670173 tcatcatcttataataatatatcaacaac-tattcatcatcttatcaaaatataa-caacaacata 14670236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 14871521 - 14871472
Alignment:
Q  266 atattcatcatcttatattaatacaa-caacaacatattcatcatctcat 314  Q
    ||||||||||||||||| ||||| || |||||||||| ||||||||||||    
T  14871521 atattcatcatcttataataatataaacaacaacataatcatcatctcat 14871472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 15464304 - 15464333
Alignment:
Q  23 catcatcacataataacttagaccacacaa 52  Q
    ||||||||||||||||||||||||||||||    
T  15464304 catcatcacataataacttagaccacacaa 15464333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 16795684 - 16795737
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||| ||||| |||||| ||||||||||||| | || |||||||||    
T  16795684 catcatcttataataatataacaaccacatattcatcattttataataatataa 16795737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 18440626 - 18440565
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||| || |||||||||| ||  |||||||||||||||||| ||||| ||||||||||||    
T  18440626 tcatcttataataatataacaacaacatattcatcatcttataataatataacaacaacata 18440565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 19485700 - 19485639
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||| || |||||||||| ||  |||||||||||||||||| ||||| ||||||||||||    
T  19485700 tcatcttataataatataacaacaacatattcatcatcttataataatataacaacaacata 19485639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 302
Target Start/End: Original strand, 21618034 - 21618071
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatat 302  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  21618034 catattcatcatcttatattgatataacaacaacatat 21618071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 22651540 - 22651581
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||| |||||||||||| ||||||||| ||||||||||    
T  22651540 acaacataatcatcatctcataataatataaacaacaacata 22651581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 27410992 - 27410951
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcat 306  Q
    |||||||||| ||||||||||||| ||||||||||| |||||    
T  27410992 catattcatcttcttatattaatataacaacaacatgttcat 27410951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 302
Target Start/End: Original strand, 36166140 - 36166177
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatat 302  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  36166140 catattcatcatcttatattgatataacaacaacatat 36166177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 6469725 - 6469689
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  6469725 catattcatcatcttatattgatataacaacaacata 6469689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 14067750 - 14067706
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    ||||||||||||||||  |||| ||||||||| ||||||||||||    
T  14067750 tattcatcatcttataaaaatataacaacaacgtattcatcatct 14067706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 15977071 - 15977107
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  15977071 catattcatcatcttatattgatataacaacaacata 15977107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 16978551 - 16978587
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  16978551 acaacataatcatcatctcataataatataagcaaca 16978587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 28849205 - 28849169
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  28849205 catattcatcatcttatattgatataacaacaacata 28849169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 43400654 - 43400690
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  43400654 acaacataatcatcatctcataataatataagcaaca 43400690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 45578417 - 45578381
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  45578417 catattcatcatcttatattgatataacaacaacata 45578381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 49390386 - 49390343
Alignment:
Q  291 acaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||    
T  49390386 acaacaacatattcatcatcttataataatataa-caacaacata 49390343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 7757 - 7828
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||| ||||||||||    
T  7757 catattcatcatcttataataatataaacaacaacataatcatcatctcataataatataaacaacaacata 7828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 7651 - 7717
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||| |||||    
T  7651 catattcatcatcttataataatataaacaacaacataatcatcatctcataataatataaacaaca 7717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 7751 - 7794
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || ||||||||| ||||||||||    
T  7751 caacaacatattcatcatcttataataatataaacaacaacata 7794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 7647 - 7688
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  7647 acaacatattcatcatcttataataatataaacaacaacata 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 18319110 - 18319193
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||| ||||| |||| ||| || |||||||||||||||||| ||||| ||| ||| ||||||| |||||||||||||||||||    
T  18319110 tcatcacatcaaaatacaacaacacatattcatcatcttataataatataactacatcatattcctcatctcatcataatataa 18319193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 31630952 - 31630893
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||    
T  31630952 catattcatcatcttataataatataacgacaatatattcatcatctcatcataatataa 31630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 18319172 - 18319230
Alignment:
Q  238 tcctcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaaca 296  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||    
T  18319172 tcctcatctcatcataatataacaacacatattcatcatcttatagtaatataacaaca 18319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 18913298 - 18913366
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  18913298 catattcatcatcttataataatacaacaac-acatattcatcatcttataataatataa-caacaacata 18913366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 18913306 - 18913373
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatca 308  Q
    |||||| || |||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||    
T  18913306 tcatcttataataatacaacaacacatattcatcatcttataataatataacaacaacatattcatca 18913373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 22075237 - 22075178
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  22075237 catattaatcatcttataataatataacaacaacatatacatcatctcgtcataatataa 22075178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 25621622 - 25621551
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| || ||||| |||| |||||||||||| ||||||||| ||||||||||    
T  25621622 catattcatcatcttataataatataaacaacaccataatcatcatctcataataatataaacaacaacata 25621551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 2200820 - 2200890
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||||||| ||| | || |||||||||||||||||||| || ||||||||| |||||||||    
T  2200820 catattcatcatcttataataacataagcaacaacatattcatcatcttataataatataaacaacaacat 2200890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 15174870 - 15174810
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||| |||||||||    
T  15174870 catattcatcatcttataataatataaacaacaacataatcatcatctcataataatataa 15174810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 15874929 - 15875000
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||| ||||| || | ||||||||||||||||||||| ||||||||| | ||||||||    
T  15874929 catattcatcattttataataatataaacgacaacatattcatcatctcataataatataaacgacaacata 15875000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22075163 - 22075094
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||||| || | ||||||| ||||||||||    
T  22075163 catattcatcttcttatattaatataacaacaacntattaatcatcttataaaaatataa-caacaacata 22075094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 18927315 - 18927381
Alignment:
Q  270 tcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||| | || |||||||||||||||||||| || |||  |||||||||||||||    
T  18927315 tcatcatcttatattaacataagcaacaacatattcatcatcttataatatcataagcaacaacata 18927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 8242754 - 8242819
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  8242754 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 8242819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 11565742 - 11565807
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  11565742 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11565807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 12620068 - 12620003
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  12620068 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12620003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 22420595 - 22420664
Alignment:
Q  266 atattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    ||||||||||||||||| ||| | || |||||| ||||||||||||| || ||||||||| |||||||||    
T  22420595 atattcatcatcttataataacataagcaacaatatattcatcatcttataataatataaacaacaacat 22420664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 22947997 - 22948062
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  22947997 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22948062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 22951953 - 22952018
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  22951953 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22952018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 23870441 - 23870506
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  23870441 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 23870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 23874397 - 23874462
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  23874397 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 23874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 23988840 - 23988905
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  23988840 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 23988905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 31630911 - 31630842
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaa-tacaacaacaacatattcatcat 309  Q
    |||||||||||||||||||| || |||||||||||||| ||| ||| |  ||||||||||||||| ||||    
T  31630911 tcatctcatcataatataacaacacatattcatcatctcataataacttaaacaacaacatattcgtcat 31630842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 18927268 - 18927312
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||    
T  18927268 aacaacaacataatcatcatctcataataatataaacaacaacat 18927312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 22075128 - 22075061
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| |||||||||||  |||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  22075128 tattaatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataa-caacaacata 22075061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 2200814 - 2200857
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  2200814 caacaacatattcatcatcttataataacataagcaacaacata 2200857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 27555767 - 27555826
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| || |||||||||| ||||||||  |||||||||||    
T  27555767 catattaatcatcttataataatataataacaacatatacatcatcttgtcataatataa 27555826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 31630944 - 31630850
Alignment:
Q  241 tcatctcatcataatataacgacgc-atattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||| || |||||||||||||   ||||||||||||| ||  ||||| ||||||| ||||||||||||||||| ||||  ||| ||||||||||    
T  31630944 tcatcttataataatataacgacaatatattcatcatctcatcataatataacaaca-catattcatcatctcataataacttaaacaacaacata 31630850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 1643548 - 1643606
Alignment:
Q  266 atattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||  |||||||||||| ||||||||| |||||||||||| || | |||||||    
T  1643548 atattcatctccttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1643606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 16623141 - 16623187
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  16623141 catattcatcactttataataatataacaacaacatattcatcatct 16623187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 18918474 - 18918406
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| |||||||||| || ||||||||| |||||||||||| || | ||||||| ||||||||||    
T  18918474 catattcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa-caacaacata 18918406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 19869502 - 19869544
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  19869502 acaacaacaacatattcatcatcttatcaaaatataatcaaca 19869544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 23393956 - 23393998
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  23393956 acaacaacaacatattcatcatcttatcaaaatataatcaaca 23393998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 23413864 - 23413906
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  23413864 acaacaacaacatattcatcatcttatcaaaatataatcaaca 23413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 15174874 - 15174833
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  15174874 acaacatattcatcatcttataataatataaacaacaacata 15174833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 18953275 - 18953234
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcat 306  Q
    |||||||||| ||||||||||||| ||||||||||| |||||    
T  18953275 catattcatcttcttatattaatataacaacaacatgttcat 18953234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 24266360 - 24266405
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||||| || ||||| ||| ||||||||||    
T  24266360 aacaacaacatattcatcatcttataataatgtaaacaacaacata 24266405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 5889868 - 5889799
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||| || ||||||||| ||||||||||    
T  5889868 catattcatcatcttataataatataacaacatcatattcatcatcttataataatataa-caacaacata 5889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 20912174 - 20912090
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| || |||||||||| ||  |||||||||| ||||||||||||| |||||||| |||||||||||| ||| |||||||||    
T  20912174 tcatcttataataatataacaacaacatattcatcttcttatattaatataacaacaatatattcatcatcacataataatataa 20912090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 262659 - 262730
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| | ||||||||    
T  262659 cataatcatcatcttataataacacaagcaacaacatattcatcatctcataataatataaacgacaacata 262730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 24768369 - 24768310
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  24768369 catattaatcatcttataataatataacaacaacatatacatcatctcgtcataatataa 24768310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 17010402 - 17010468
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||| |||||    
T  17010402 catattcatcatcttataataatataaacaacaacataatcatcatctcataataatataaacaaca 17010468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22108216 - 22108147
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| | || ||||||||| ||||||||||    
T  22108216 catattcatcatcttataaaaatataacaacaacatattcatcattttataataatataa-caacaacata 22108147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22108249 - 22108180
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  22108249 catattcatcattttataataatataacaacaacatattcatcatcttataaaaatataa-caacaacata 22108180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 5889904 - 5889842
Alignment:
Q  265 catattcatcatcttatattaata---caacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| |||||   ||||||||||||||||||||||| || |||||||||    
T  5889904 catattcatcatcttataataatataacaacaacaacatattcatcatcttataataatataa 5889842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 18355050 - 18355096
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  18355050 catattcatcttcttatattaatataacaacaacgtattcatcatct 18355096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22120361 - 22120292
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||  |||| |||||||||||| ||||||| | || ||||||||| ||||||||||    
T  22120361 catattcatcatcttatagaaatataacaacaacatactcatcattttataataatataa-caacaacata 22120292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 22120394 - 22120348
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  22120394 catattcatcattttataataatataacaacaacatattcatcatct 22120348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 24768295 - 24768249
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  24768295 catattcatcttcttatattaatataacaacaacgtattcatcatct 24768249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 19473910 - 19473845
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  19473910 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 19473845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 20294781 - 20294846
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  20294781 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 20294846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 21742312 - 21742268
Alignment:
Q  291 acaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||||||| || |||||| ||||||||||    
T  21742312 acaacaacatattcatcatctcataatcatataaacaacaacata 21742268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 11226427 - 11226478
Alignment:
Q  279 tatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||| ||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  11226427 tataataatataacaacaacatattcatcatcttatcaaaatataatcaaca 11226478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 21742305 - 21742235
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||| ||| | ||| || |||||||||||||||||||| || ||||||||| ||||||||||    
T  21742305 catattcatcatctcataatcatataaacaacaacatattcatcatcttataataatataa-caacaacata 21742235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 24211985 - 24212028
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  24211985 caacaacatattcatcatcttataataacataagcaacaacata 24212028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 27768104 - 27768032
Alignment:
Q  266 atattcatcatcttatattaata----caacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    ||||||||||||||||| |||||     |||||||||||| |||||||||||| ||||||||| | |||||||    
T  27768104 atattcatcatcttataataatataataaacaacaacataatcatcatctcataataatataaacgacaacat 27768032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 5889918 - 5889870
Alignment:
Q  284 taatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    ||||| |||||||||||||||||||||| || ||||||||| ||||||||    
T  5889918 taatataacaacaacatattcatcatcttataataatataa-caacaaca 5889870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 6765333 - 6765378
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||| |||||||||| || ||||||||| ||||||||||    
T  6765333 aacaacaacattttcatcatcttataataatataaacaacaacata 6765378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 17010398 - 17010439
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  17010398 acaacatattcatcatcttataataatataaacaacaacata 17010439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 20299104 - 20299149
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||    
T  20299104 aacaacaacataatcatcatcttataataacataagcaacaacata 20299149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 20912176 - 20912123
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||| ||||| |||||||||||||||||| ||| ||  ||||||||    
T  20912176 catcatcttataataatataacaacaacatattcatcttcttatattaatataa 20912123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 18354995 - 18355035
Alignment:
Q  284 taatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||| ||||||||||||| ||||||||| |||||||||||    
T  18354995 taatataacaacaacatatacatcatctcgtcataatataa 18355035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 22120328 - 22120284
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcat 309  Q
    |||| ||||||| ||||| ||||| ||||||||||||||||||||    
T  22120328 catactcatcattttataataatataacaacaacatattcatcat 22120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 27768145 - 27768109
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  27768145 acaacataatcatcatctcataataatataagcaaca 27768109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 39244709 - 39244745
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  39244709 catattcatcatcttatattgatataacaacaacata 39244745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 8605 - 8537
Alignment:
Q  266 atattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||    
T  8605 atattcatcattttataataatataacaacaacatattcatcatcttataataatataa-caacaacata 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 8672 - 8613
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||| || |||||||||    
T  8672 catattcatcatcttctaataatataacaacaacatattcatcatcttataataatataa 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 8639 - 8570
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||| | || ||||||||| ||||||||||    
T  8639 catattcatcatcttataataatataacaacaatatattcatcattttataataatataa-caacaacata 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 8573 - 8537
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  8573 catattcatcatcttataataatataacaacaacata 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 711 - 652
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  711 catattaatcatcttataataatataacaacaacatatacatcatctcgtcataatataa 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22140 - 22069
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||| ||||| || |||||||||| |||||||||||| ||||||||| ||||||||||    
T  22140 catattcatcctcttataataatataaacaacaacataatcatcatctcatgataatataaacaacaacata 22069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22174 - 22103
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| ||| | || |||||||||||||||| ||| || ||||||||| ||||||||||    
T  22174 cataatcatcatcttataataacataagcaacaacatattcatcctcttataataatataaacaacaacata 22103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 22182 - 22137
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||    
T  22182 aacaacaacataatcatcatcttataataacataagcaacaacata 22137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 10866 - 10807
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||    
T  10866 catattaatcatcttataataatataacaacaacatatacatcatctcgtcataatataa 10807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 10792 - 10746
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  10792 catattcatcttcttatattaatataacaacaacgtattcatcatct 10746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 6487 - 6553
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||| |||||    
T  6487 catattcatcatcttataataatataaacaacaacataatcatcatctcataataatataaacaaca 6553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 6483 - 6524
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  6483 acaacatattcatcatcttataataatataaacaacaacata 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 3370 - 3334
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  3370 acaacataatcatcatctcataataatataagcaaca 3334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 6447 - 6483
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  6447 acaacataatcatcatctcataataatataagcaaca 6483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19123 - 19192
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| || | ||||||| ||||||||||    
T  19123 catattcatcttcttatattaatataacaacaacgtattcatcatcttataaaaatataa-caacaacata 19192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 19049 - 19108
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| |||||||| |||| ||||||||| |||||||||||    
T  19049 catattaatcatcttataataatataacaacaaaatatacatcatctcgtcataatataa 19108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19227 - 19296
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||| ||||||||||||  ||||||||| |||||||||||| || | ||||||| ||||||||||    
T  19227 catattcatcttcttatattaatctaacaacaacgtattcatcatcttataaaaatataa-caacaacata 19296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 21215 - 21146
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||| || | ||||||| ||||||||||    
T  21215 catattcatcatcttataaaaatataacaacaacatattcatcatcttataaaaatataa-caacaacata 21146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 25491 - 25428
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||| |||||||||||||||||||||  || ||||||||| ||||||||||    
T  25491 catcatcttatagtaatataacaacaacatattcatcatcatataataatataa-caacaacata 25428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 25464 - 25419
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatc 310  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||    
T  25464 catattcatcatcatataataatataacaacaacatattcatcatc 25419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 8806 - 8865
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| ||||| ||||||||||||| || |||||| |||||||||||    
T  8806 catattaatcatcttataataatataacaacaacatatacaacatctcgtcataatataa 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 950 - 1009
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| || | |||||||    
T  950 catattcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 11056 - 11115
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||| || | |||||||    
T  11056 catattcatcttcttatattaatataacaacaacgtattcatcatcttataaaaatataa 11115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 11161 - 11190
Alignment:
Q  23 catcatcacataataacttagaccacacaa 52  Q
    ||||||||||||||||||||||||||||||    
T  11161 catcatcacataataacttagaccacacaa 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 11091 - 11158
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||  |||| ||||||||  |||||||||||| || | ||||||| ||||||||||    
T  11091 tattcatcatcttataaaaatataacaacaatgtattcatcatcttatgaaaatataa-caacaacata 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 11124 - 11176
Alignment:
Q  267 tattcatcatcttatattaatacaacaacaacatattcatcatctcatcataa 319  Q
    |||||||||||||||   |||| ||||||||||||||||||||| ||| ||||    
T  11124 tattcatcatcttatgaaaatataacaacaacatattcatcatcacataataa 11176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 22286 - 22228
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataa 324  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||| || |||||||||    
T  22286 catatttatcatcttataataatacaacaac-acatattcatcatcttataataatataa 22228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 26918 - 26847
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| ||||| || |||||||||| ||||||||| || ||||||||| ||||||||||    
T  26918 cataatcatcatcttataataatataaacaacaacataatcatcatcttataataatataaacaacaacata 26847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 26960 - 26915
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||    
T  26960 aacaacaacataatcatcatctcataataatataaacaacaacata 26915  T

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Target: scaffold0076; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 26884 - 26817
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaa 331  Q
    |||| ||||||||||||| ||||| || |||||||||| ||||||||| || |||| |||||||||||    
T  26884 cataatcatcatcttataataatataaacaacaacataatcatcatcttataataacataagcaacaa 26817  T

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Target: scaffold0076; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 26952 - 26881
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||| ||| ||||| || |||||||||| ||||||||| || ||||||||| ||||||||||    
T  26952 cataatcatcatctcataataatataaacaacaacataatcatcatcttataataatataaacaacaacata 26881  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 27485755 - 27485684
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||| || ||| |||||| |||||||||||| ||||||||| | ||||||||    
T  27485755 catattcatcatcttataataatataaacaaaaacataatcatcatctcataataatataaacgacaacata 27485684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 20634540 - 20634470
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||||||| ||| | || |||||||||||||||||| | || ||||||||| |||||||||    
T  20634540 catattcatcatcttataataacataagcaacaacatattcatcattttataataatataaacaacaacat 20634470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 21082450 - 21082384
Alignment:
Q  269 ttcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||| | |||||||    
T  21082450 ttcatcatcttataataatataaacaacaacataatcatcatctcataataatataaacgacaacat 21082384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 10103034 - 10102969
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  10103034 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 10102969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 24629705 - 24629640
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  24629705 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 24629640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 27600712 - 27600777
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  27600712 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 27600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 30346241 - 30346176
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  30346241 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 30346176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 13102105 - 13102062
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  13102105 caacaacatattcatcatcttataataacataagcaacaacata 13102062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 20634546 - 20634503
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  20634546 caacaacatattcatcatcttataataacataagcaacaacata 20634503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 27485789 - 27485718
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||| ||| ||||| || |||||||||||||||||||| || ||||||||| ||| ||||||    
T  27485789 cataatcatcatctaataataatataaacaacaacatattcatcatcttataataatataaacaaaaacata 27485718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 41532206 - 41532164
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  41532206 acaacaacaacatattcatcatcttatcaaaatataatcaaca 41532164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 27384624 - 27384559
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||| ||||| |||||||||||| || | ||||||| |||||    
T  27384624 catattcatcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaaca 27384559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 27471957 - 27472002
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||    
T  27471957 aacaacaacataatcatcatcttataataacataagcaacaacata 27472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 34874853 - 34874793
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||| ||||||||||||| ||| | || |||||||||||||||||||| || |||||||||    
T  34874853 cataatcatcatcttataataacataagcaacaacatattcatcatcttataataatataa 34874793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 45030435 - 45030399
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  45030435 catattcatcatcttatattgatataacaacaacata 45030399  T

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Target: scaffold0674 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 3000 - 3070
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||||||||| ||| | || |||||||||||||||||| | || ||||||||| |||||||||    
T  3000 catattcatcatcttataataacataagcaacaacatattcatcattttataataatataaacaacaacat 3070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 2994 - 3037
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  2994 caacaacatattcatcatcttataataacataagcaacaacata 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 4598 - 4528
Alignment:
Q  266 atattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||| ||||  || |||||||||| ||||||||| || ||||||||| ||||||||||    
T  4598 atattcatcatcttataataatgtaaacaacaacataatcatcatcttataataatataaacaacaacata 4528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 4565 - 4495
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||| ||||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||| || |||||||    
T  4565 cataatcatcatcttataataatataaacaacaacatat-catcatctcataataatataaacagcaacata 4495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 15049 - 15115
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||| ||| ||||| || |||||||||| |||||||||||| ||||||||| |||||    
T  15049 catattcatcatctaataataatataaacaacaacataatcatcatctcataataatataaacaaca 15115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 15045 - 15086
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  15045 acaacatattcatcatctaataataatataaacaacaacata 15086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 63527 - 63593
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||| ||||| || ||||| |||| |||||||||||| ||||||||| |||||    
T  63527 catattcatcatcttataataatataaacaacatcataatcatcatctcataataatataaacaaca 63593  T

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Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 63451 - 63487
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  63451 acaacataatcatcatctcataataatataagcaaca 63487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 126506 - 126576
Alignment:
Q  266 atattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||| ||||||||| ||| | || |||||||||||||||||||| || |||| |||||||||||||||    
T  126506 atattcaccatcttataataacataagcaacaacatattcatcatcttataataacataagcaacaacata 126576  T

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Target: scaffold0356 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 1091 - 1046
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||    
T  1091 aacaacaacatattcatcatctcataataacataaacaacaacata 1046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 11397 - 11462
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  11397 catattcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 20 - 80
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||||||||||||||||| ||||| || |||||||||| |||||||||||| |||| ||||    
T  20 catattcatcatcttataataatataaacaacaacataatcatcatctcataataacataa 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 14 - 57
Alignment:
Q  292 caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||||| || ||||||||| ||||||||||    
T  14 caacaacatattcatcatcttataataatataaacaacaacata 57  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 1950 - 2020
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||||  || |||||||| || ||||||||||| ||||||||| ||||||||||    
T  1950 catattcatcatcttataataatgtaaacaacaacaaat-catcatctcataataatataaacaacaacata 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 6505 - 6434
Alignment:
Q  265 catattcatcatcttatattaatacaacaac-aacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||| | || ||  |||||||||||||||| || |||| |||||||||||||||    
T  6505 catattcatcatcttataataacataagaaataacatattcatcatcttataataacataagcaacaacata 6434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 10115 - 10186
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||||| ||| | || |||||| ||||||||||||| || |||| |||| ||||||||||    
T  10115 catattcatcatcttataataacataagcaacaatatattcatcatcttataataacataaacaacaacata 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 6239 - 6180
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||| ||||||||||||| ||||||||| |||||||||||| || | ||||||| |||||    
T  6239 catcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 6180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 2886 - 2948
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||| ||||| ||||||||||| |||||||| | || ||||||||| |||||||||    
T  2886 catcatcttataataatataacaacaacatgttcatcattttataataatataa-caacaacat 2948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 6949 - 7011
Alignment:
Q  271 catcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||||||||| ||||| ||||||||||| |||||||| | || ||||||||| |||||||||    
T  6949 catcatcttataataatataacaacaacatgttcatcattttataataatataa-caacaacat 7011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 2888 - 2981
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||| || |||||||||| ||  ||| |||||||| ||||| ||||| ||||||||||| || ||||| | |||||||||||| |||||||||    
T  2888 tcatcttataataatataacaacaacatgttcatcattttataataatataacaacaacatgtttatcattttatcataatataa-caacaacat 2981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 6951 - 7044
Alignment:
Q  241 tcatctcatcataatataacgacg-catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacat 334  Q
    |||||| || |||||||||| ||  ||| |||||||| ||||| ||||| ||||||||||| || ||||| | |||||||||||| |||||||||    
T  6951 tcatcttataataatataacaacaacatgttcatcattttataataatataacaacaacatgtttatcattttatcataatataa-caacaacat 7044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 5084 - 5038
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| | || |||||||| ||||||||||||||||||||||    
T  5084 catattcatctttttgtattaatataacaacaacatattcatcatct 5038  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 33919 - 33877
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  33919 acaacaacaacatattcatcatcttatcaaaatataatcaaca 33877  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 15338 - 15296
Alignment:
Q  288 acaacaacaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  15338 acaacaacaacatattcatcatcttatcaaaatataatcaaca 15296  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 37114 - 37046
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    ||||||||||||||||||  |||| | |||||||||||||||||||| || | ||||||| ||||||||||    
T  37114 catattcatcatcttataaaaatata-caacaacatattcatcatcttataaaaatataa-caacaacata 37046  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 79423 - 79469
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacatattcatcatct 311  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||||    
T  79423 catattcatcttcttatattaatataacaacaatgtattcatcatct 79469  T

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Target: scaffold0125 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 2563 - 2518
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||| |||||||||||| ||||||| | ||||||||||    
T  2563 aacaacaacataatcatcatctcataataatatcaacaacaacata 2518  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 54517 - 54472
Alignment:
Q  290 aacaacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||| ||||| || |||| |||||||||||||||    
T  54517 aacaacaacatattcaccatcttataataacataagcaacaacata 54472  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 116005 - 116041
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  116005 catattcatcatcttatattgatataacaacaacata 116041  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 165 - 236
Alignment:
Q  264 gcatattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||| || ||||  || |||||||| || ||||||||||| ||||||||| ||||||||||    
T  165 gcatattcatcatcttttaataatgtaaacaacaacaaat-catcatctcataataatataaacaacaacata 236  T

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Target: scaffold0335; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 9244 - 9315
Alignment:
Q  264 gcatattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataagcaacaacata 335  Q
    |||||||||||||||| || ||||  || |||||||| || ||||||||||| ||||||||| ||||||||||    
T  9244 gcatattcatcatcttttaataatgtaaacaacaacaaat-catcatctcataataatataaacaacaacata 9315  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 6221 - 6249
Alignment:
Q  24 atcatcacataataacttagaccacacaa 52  Q
    |||||||||||||||||||||||||||||    
T  6221 atcatcacataataacttagaccacacaa 6249  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 71079 - 71043
Alignment:
Q  294 acaacatattcatcatctcatcataatataagcaaca 330  Q
    |||||||| |||||||||||| |||||||||||||||    
T  71079 acaacatagtcatcatctcataataatataagcaaca 71043  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 105993 - 106085
Alignment:
Q  241 tcatctcatcataatataacgacgcatattcatcatcttatattaatacaacaacaacatattcatcatctcatcataatataagcaacaaca 333  Q
    |||||| || |||||||| | || |||||||||||||| ||| |||   ||||||||| |||| |||||||||| ||||  ||| ||||||||    
T  105993 tcatcttataataatatagcaacacatattcatcatctcataataacttaacaacaacgtatttatcatctcataataacttaaacaacaaca 106085  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 66741 - 66801
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||| ||||||||||||| ||| | || |||||||||||||||||||| || |||||||||    
T  66741 cataatcatcatcttataataacataagcaacaacatattcatcatcttataataatataa 66801  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 75861 - 75921
Alignment:
Q  265 catattcatcatcttatattaatacaa-caacaacatattcatcatctcatcataatataa 324  Q
    |||| ||||||||||||| ||| | || |||||||||||||||||||| || |||||||||    
T  75861 cataatcatcatcttataataacataagcaacaacatattcatcatcttataataatataa 75921  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 71514 - 71550
Alignment:
Q  265 catattcatcatcttatattaatacaacaacaacata 301  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  71514 catattcatcatcttatattgatataacaacaacata 71550  T

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