View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10591_high_1 (Length: 494)

Name: NF10591_high_1
Description: NF10591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10591_high_1
NF10591_high_1
[»] chr3 (57 HSPs)
chr3 (12-478)||(53754054-53754521)
chr3 (26-228)||(48409485-48409687)
chr3 (12-132)||(29858854-29858975)
chr3 (12-130)||(51164950-51165069)
chr3 (12-132)||(41287259-41287379)
chr3 (12-130)||(1334771-1334889)
chr3 (14-132)||(21585402-21585520)
chr3 (12-130)||(54021448-54021566)
chr3 (12-180)||(53050975-53051143)
chr3 (12-130)||(38600796-38600914)
chr3 (42-170)||(32977810-32977938)
chr3 (43-171)||(39329771-39329899)
chr3 (60-170)||(46194244-46194354)
chr3 (42-227)||(50736003-50736183)
chr3 (42-227)||(50776672-50776852)
chr3 (48-132)||(1923087-1923171)
chr3 (56-157)||(47496141-47496242)
chr3 (43-130)||(9218144-9218231)
chr3 (43-129)||(11529132-11529218)
chr3 (63-132)||(27668368-27668437)
chr3 (43-171)||(21296524-21296652)
chr3 (43-130)||(32023122-32023209)
chr3 (42-170)||(30261521-30261650)
chr3 (12-73)||(36315723-36315784)
chr3 (20-132)||(3862171-3862282)
chr3 (43-171)||(42547127-42547255)
chr3 (14-132)||(44219027-44219143)
chr3 (64-130)||(54845558-54845624)
chr3 (67-132)||(45746363-45746428)
chr3 (32-88)||(39144686-39144742)
chr3 (43-130)||(33994656-33994743)
chr3 (69-132)||(45241008-45241071)
chr3 (45-132)||(52325174-52325261)
chr3 (20-95)||(54458307-54458382)
chr3 (64-130)||(53876478-53876544)
chr3 (12-129)||(8498254-8498371)
chr3 (45-130)||(32827327-32827412)
chr3 (43-132)||(34081076-34081165)
chr3 (43-130)||(5245411-5245498)
chr3 (7-132)||(8706145-8706268)
chr3 (7-132)||(9058032-9058155)
chr3 (62-101)||(49122174-49122213)
chr3 (43-130)||(54122245-54122332)
chr3 (64-130)||(15280604-15280670)
chr3 (67-129)||(17777039-17777101)
chr3 (67-129)||(19078340-19078402)
chr3 (52-94)||(35300672-35300714)
chr3 (64-130)||(43639558-43639624)
chr3 (66-132)||(50150411-50150477)
chr3 (202-235)||(9218039-9218072)
chr3 (42-95)||(53583580-53583633)
chr3 (43-95)||(14756135-14756187)
chr3 (63-127)||(29807126-29807190)
chr3 (15-95)||(31650945-31651024)
chr3 (70-130)||(36097703-36097763)
chr3 (43-95)||(44234124-44234176)
chr3 (194-234)||(47496072-47496112)
[»] chr8 (75 HSPs)
chr8 (20-227)||(40077748-40077955)
chr8 (14-170)||(29638260-29638416)
chr8 (12-235)||(14689854-14690077)
chr8 (12-170)||(28791267-28791425)
chr8 (28-170)||(32678994-32679136)
chr8 (12-129)||(11637140-11637256)
chr8 (26-180)||(14117411-14117565)
chr8 (12-121)||(39998171-39998280)
chr8 (26-171)||(41726479-41726624)
chr8 (12-171)||(886438-886597)
chr8 (20-131)||(41759628-41759739)
chr8 (12-170)||(2195427-2195584)
chr8 (31-132)||(8418311-8418412)
chr8 (15-132)||(1494241-1494356)
chr8 (46-132)||(2875110-2875196)
chr8 (21-170)||(25174584-25174733)
chr8 (12-170)||(45420929-45421088)
chr8 (54-132)||(2797037-2797115)
chr8 (54-132)||(14748738-14748816)
chr8 (46-130)||(2119715-2119799)
chr8 (44-128)||(18725910-18725994)
chr8 (7-130)||(5392048-5392171)
chr8 (26-132)||(8618125-8618231)
chr8 (12-101)||(5878217-5878305)
chr8 (44-121)||(18733393-18733470)
chr8 (7-131)||(15559115-15559239)
chr8 (36-132)||(43844897-43844992)
chr8 (7-130)||(32241409-32241532)
chr8 (43-130)||(44790443-44790530)
chr8 (42-132)||(7258387-7258477)
chr8 (12-130)||(38201382-38201499)
chr8 (20-170)||(45197570-45197720)
chr8 (35-88)||(25266814-25266867)
chr8 (64-129)||(31410650-31410715)
chr8 (142-218)||(25267177-25267253)
chr8 (64-171)||(4274341-4274448)
chr8 (46-101)||(23764994-23765049)
chr8 (43-130)||(32967298-32967385)
chr8 (43-126)||(42558602-42558685)
chr8 (43-130)||(44615386-44615473)
chr8 (20-114)||(325114-325208)
chr8 (26-132)||(10728927-10729032)
chr8 (70-212)||(32231768-32231910)
chr8 (12-122)||(33743783-33743893)
chr8 (46-132)||(42412407-42412493)
chr8 (63-132)||(1230403-1230472)
chr8 (63-132)||(33826228-33826297)
chr8 (43-132)||(44225942-44226031)
chr8 (43-130)||(5962494-5962581)
chr8 (55-170)||(37459309-37459424)
chr8 (46-96)||(9734191-9734241)
chr8 (68-130)||(12653686-12653748)
chr8 (60-132)||(17005945-17006014)
chr8 (60-132)||(17571234-17571303)
chr8 (42-132)||(27868345-27868435)
chr8 (64-130)||(28802766-28802832)
chr8 (68-130)||(33925130-33925192)
chr8 (64-130)||(45425484-45425550)
chr8 (12-121)||(5423154-5423263)
chr8 (46-111)||(8394279-8394344)
chr8 (20-101)||(27571580-27571661)
chr8 (62-171)||(34287119-34287228)
chr8 (54-132)||(44975779-44975859)
chr8 (45-117)||(3384546-3384618)
chr8 (12-80)||(26570142-26570210)
chr8 (46-131)||(26677067-26677156)
chr8 (14-130)||(31132729-31132845)
chr8 (7-171)||(33190894-33191058)
chr8 (42-93)||(32472130-32472181)
chr8 (43-130)||(37219785-37219872)
chr8 (64-130)||(39171542-39171608)
chr8 (63-132)||(29567202-29567271)
chr8 (62-122)||(17790110-17790170)
chr8 (66-130)||(29615797-29615861)
chr8 (64-132)||(39416308-39416375)
[»] chr6 (30 HSPs)
chr6 (7-234)||(33921454-33921681)
chr6 (12-234)||(3166098-3166319)
chr6 (26-132)||(33017948-33018054)
chr6 (20-162)||(3874048-3874189)
chr6 (43-207)||(8232332-8232495)
chr6 (12-132)||(9354430-9354553)
chr6 (13-132)||(15371855-15371973)
chr6 (46-132)||(4552906-4552992)
chr6 (43-130)||(31265778-31265865)
chr6 (46-132)||(15321249-15321335)
chr6 (20-169)||(34803703-34803854)
chr6 (12-102)||(34915803-34915893)
chr6 (13-130)||(7301071-7301188)
chr6 (20-73)||(20027638-20027691)
chr6 (56-132)||(15351417-15351493)
chr6 (20-132)||(20383843-20383953)
chr6 (54-169)||(2310320-2310435)
chr6 (43-130)||(3604621-3604708)
chr6 (43-130)||(9755168-9755255)
chr6 (70-170)||(34441851-34441950)
chr6 (20-129)||(14312646-14312755)
chr6 (12-101)||(15355603-15355691)
chr6 (43-132)||(28538993-28539082)
chr6 (56-132)||(15325144-15325220)
chr6 (63-126)||(7739559-7739622)
chr6 (68-130)||(30063995-30064057)
chr6 (20-129)||(14306239-14306348)
chr6 (43-130)||(4238421-4238507)
chr6 (70-132)||(8569787-8569849)
chr6 (26-79)||(34442134-34442187)
[»] chr2 (76 HSPs)
chr2 (20-217)||(18460400-18460597)
chr2 (12-180)||(1908484-1908652)
chr2 (26-170)||(7931500-7931644)
chr2 (21-170)||(9472381-9472530)
chr2 (26-170)||(24356070-24356214)
chr2 (12-171)||(7213433-7213592)
chr2 (20-228)||(28843958-28844171)
chr2 (12-130)||(9724879-9724995)
chr2 (14-169)||(37529063-37529218)
chr2 (12-234)||(6972529-6972756)
chr2 (46-132)||(2048289-2048375)
chr2 (12-132)||(4283009-4283129)
chr2 (20-180)||(43182223-43182381)
chr2 (12-236)||(31348404-31348628)
chr2 (12-233)||(13221965-13222185)
chr2 (51-132)||(39166725-39166806)
chr2 (27-132)||(928543-928646)
chr2 (42-132)||(14384298-14384388)
chr2 (42-132)||(19515878-19515968)
chr2 (20-132)||(24451781-24451891)
chr2 (12-132)||(8550632-8550752)
chr2 (12-132)||(31592547-31592666)
chr2 (12-132)||(3199895-3200012)
chr2 (54-132)||(43427118-43427196)
chr2 (20-105)||(314451-314536)
chr2 (73-130)||(33880157-33880214)
chr2 (43-132)||(39095628-39095717)
chr2 (12-132)||(44424253-44424373)
chr2 (20-132)||(4794570-4794682)
chr2 (12-132)||(18181203-18181323)
chr2 (12-84)||(38280186-38280258)
chr2 (63-170)||(10069626-10069733)
chr2 (12-162)||(25604328-25604476)
chr2 (43-130)||(28108396-28108483)
chr2 (76-228)||(38282477-38282631)
chr2 (20-171)||(41436037-41436188)
chr2 (54-120)||(2427369-2427435)
chr2 (70-132)||(3487391-3487453)
chr2 (14-132)||(6213842-6213960)
chr2 (46-132)||(6723884-6723969)
chr2 (20-77)||(14890369-14890426)
chr2 (12-132)||(734002-734121)
chr2 (64-132)||(11726764-11726832)
chr2 (26-130)||(23684958-23685062)
chr2 (65-132)||(6685706-6685773)
chr2 (43-130)||(28301433-28301520)
chr2 (12-95)||(36748182-36748265)
chr2 (43-130)||(37247905-37247992)
chr2 (43-130)||(44534504-44534591)
chr2 (45-130)||(13375212-13375298)
chr2 (46-132)||(26273756-26273842)
chr2 (12-101)||(40710605-40710693)
chr2 (63-132)||(44024715-44024784)
chr2 (7-127)||(3100402-3100522)
chr2 (63-123)||(29937955-29938015)
chr2 (20-131)||(38872920-38873029)
chr2 (20-95)||(39807242-39807322)
chr2 (66-130)||(43077770-43077834)
chr2 (43-130)||(10818620-10818707)
chr2 (68-171)||(15859388-15859491)
chr2 (43-130)||(24775829-24775916)
chr2 (43-130)||(28526963-28527050)
chr2 (64-171)||(31546060-31546167)
chr2 (64-130)||(5212000-5212066)
chr2 (12-130)||(8031740-8031858)
chr2 (66-132)||(16864978-16865044)
chr2 (64-130)||(30757610-30757676)
chr2 (7-93)||(33755293-33755379)
chr2 (82-132)||(44736716-44736766)
chr2 (63-132)||(2756671-2756740)
chr2 (63-132)||(7420918-7420987)
chr2 (64-128)||(435120-435184)
chr2 (76-132)||(6075495-6075551)
chr2 (20-84)||(12949963-12950026)
chr2 (65-132)||(33602269-33602339)
chr2 (63-95)||(43056409-43056441)
[»] chr7 (63 HSPs)
chr7 (12-180)||(2849204-2849372)
chr7 (26-234)||(18731337-18731542)
chr7 (16-170)||(27337867-27338020)
chr7 (7-132)||(32775980-32776105)
chr7 (59-235)||(5068335-5068511)
chr7 (12-170)||(30659470-30659628)
chr7 (12-170)||(37264272-37264430)
chr7 (20-227)||(36070003-36070214)
chr7 (20-132)||(10355733-10355845)
chr7 (12-132)||(24288420-24288540)
chr7 (12-132)||(34064212-34064331)
chr7 (26-170)||(39343675-39343819)
chr7 (26-161)||(43007862-43007997)
chr7 (12-132)||(38589731-38589851)
chr7 (43-237)||(37496418-37496612)
chr7 (14-227)||(3667870-3668082)
chr7 (12-117)||(45218148-45218253)
chr7 (12-92)||(23111079-23111159)
chr7 (63-173)||(28333127-28333237)
chr7 (12-169)||(30462620-30462777)
chr7 (12-132)||(32972008-32972128)
chr7 (12-132)||(6591527-6591651)
chr7 (7-130)||(37490603-37490726)
chr7 (54-132)||(9602858-9602936)
chr7 (54-132)||(9830429-9830507)
chr7 (46-132)||(14648943-14649029)
chr7 (20-169)||(29997027-29997176)
chr7 (12-121)||(21412025-21412134)
chr7 (42-132)||(25778741-25778831)
chr7 (12-130)||(38181864-38181982)
chr7 (12-173)||(8149915-8150075)
chr7 (37-101)||(6838090-6838154)
chr7 (43-171)||(31581464-31581592)
chr7 (12-132)||(47238214-47238334)
chr7 (43-130)||(40590846-40590933)
chr7 (64-130)||(29257546-29257612)
chr7 (46-130)||(23186167-23186251)
chr7 (43-126)||(1643359-1643442)
chr7 (43-130)||(30463015-30463102)
chr7 (7-130)||(44604463-44604585)
chr7 (43-129)||(7425899-7425985)
chr7 (43-169)||(17265987-17266113)
chr7 (63-129)||(25940790-25940856)
chr7 (64-130)||(34963853-34963919)
chr7 (63-123)||(11726787-11726847)
chr7 (43-95)||(21387501-21387553)
chr7 (12-132)||(21446433-21446553)
chr7 (7-130)||(2842037-2842160)
chr7 (67-171)||(40023772-40023875)
chr7 (64-130)||(23703915-23703981)
chr7 (54-132)||(30459059-30459137)
chr7 (64-130)||(46288473-46288539)
chr7 (12-101)||(9658866-9658954)
chr7 (61-122)||(19505809-19505870)
chr7 (63-132)||(39171135-39171204)
chr7 (63-132)||(39498671-39498740)
chr7 (76-132)||(1101997-1102053)
chr7 (43-130)||(11616560-11616648)
chr7 (66-130)||(29434624-29434688)
chr7 (63-127)||(34001900-34001964)
chr7 (66-130)||(36117660-36117724)
chr7 (64-120)||(46095462-46095518)
chr7 (43-95)||(49100523-49100575)
[»] scaffold0685 (1 HSPs)
scaffold0685 (12-170)||(6390-6549)
[»] chr1 (100 HSPs)
chr1 (12-170)||(52382377-52382536)
chr1 (12-169)||(36232780-36232937)
chr1 (12-132)||(27209958-27210078)
chr1 (12-218)||(5115816-5116023)
chr1 (20-170)||(14352525-14352675)
chr1 (14-114)||(37280990-37281090)
chr1 (265-463)||(8571696-8571894)
chr1 (42-180)||(12267652-12267790)
chr1 (7-171)||(11425855-11426019)
chr1 (12-171)||(16040035-16040194)
chr1 (55-234)||(50333830-50334009)
chr1 (20-129)||(705348-705457)
chr1 (54-235)||(2886065-2886246)
chr1 (12-169)||(31798378-31798535)
chr1 (14-111)||(37495847-37495944)
chr1 (12-173)||(47293590-47293750)
chr1 (12-162)||(37925237-37925387)
chr1 (12-132)||(4466145-4466265)
chr1 (12-170)||(26583687-26583845)
chr1 (12-132)||(28706614-28706735)
chr1 (12-132)||(27932824-27932944)
chr1 (12-132)||(29756133-29756253)
chr1 (15-170)||(29225402-29225556)
chr1 (12-225)||(37541104-37541321)
chr1 (7-173)||(40061765-40061931)
chr1 (26-127)||(21304811-21304912)
chr1 (27-228)||(29225654-29225854)
chr1 (12-130)||(2219439-2219557)
chr1 (7-169)||(17342788-17342950)
chr1 (72-170)||(20988533-20988631)
chr1 (12-114)||(26924111-26924213)
chr1 (12-169)||(24131391-24131548)
chr1 (12-132)||(46363401-46363522)
chr1 (73-170)||(5359319-5359415)
chr1 (12-128)||(33149274-33149390)
chr1 (12-119)||(40754403-40754511)
chr1 (20-132)||(46273157-46273269)
chr1 (12-88)||(50926788-50926864)
chr1 (7-130)||(51749169-51749292)
chr1 (54-127)||(50086011-50086084)
chr1 (52-132)||(10587612-10587692)
chr1 (20-132)||(45305850-45305961)
chr1 (12-120)||(51049517-51049624)
chr1 (64-171)||(43895805-43895912)
chr1 (64-171)||(48242633-48242740)
chr1 (62-132)||(44580513-44580583)
chr1 (73-170)||(16451590-16451687)
chr1 (73-170)||(16460743-16460840)
chr1 (26-170)||(2571323-2571465)
chr1 (16-132)||(13500724-13500840)
chr1 (32-132)||(18186217-18186317)
chr1 (53-124)||(167489-167560)
chr1 (42-129)||(3718870-3718957)
chr1 (43-130)||(7785296-7785383)
chr1 (43-130)||(25983650-25983737)
chr1 (12-170)||(27831804-27831963)
chr1 (28-87)||(31634300-31634359)
chr1 (43-130)||(50267460-50267547)
chr1 (65-132)||(52146699-52146766)
chr1 (43-132)||(25842596-25842685)
chr1 (26-132)||(30903233-30903338)
chr1 (63-132)||(19349036-19349105)
chr1 (13-130)||(32587764-32587881)
chr1 (13-130)||(46496017-46496134)
chr1 (76-132)||(4659428-4659484)
chr1 (14-90)||(16956582-16956658)
chr1 (64-128)||(21304385-21304449)
chr1 (46-94)||(27142948-27142996)
chr1 (63-131)||(34877132-34877200)
chr1 (46-130)||(45889273-45889357)
chr1 (43-130)||(5442339-5442426)
chr1 (62-132)||(7075441-7075514)
chr1 (43-130)||(8327716-8327803)
chr1 (12-75)||(36326196-36326259)
chr1 (7-130)||(52432311-52432434)
chr1 (35-132)||(26040638-26040738)
chr1 (54-132)||(48391744-48391822)
chr1 (64-130)||(49494206-49494272)
chr1 (63-132)||(2246319-2246388)
chr1 (43-128)||(12691906-12691990)
chr1 (27-68)||(20986588-20986629)
chr1 (64-129)||(46536340-46536405)
chr1 (46-114)||(5503435-5503503)
chr1 (12-100)||(25819338-25819425)
chr1 (14-130)||(42926133-42926249)
chr1 (7-95)||(52830400-52830488)
chr1 (63-122)||(141743-141802)
chr1 (21-88)||(9590553-9590620)
chr1 (43-130)||(28277060-28277147)
chr1 (43-130)||(28839338-28839425)
chr1 (45-132)||(40988272-40988359)
chr1 (63-129)||(34813917-34813983)
chr1 (64-130)||(38664400-38664466)
chr1 (86-132)||(40019756-40019802)
chr1 (64-130)||(46880415-46880480)
chr1 (26-64)||(47792224-47792262)
chr1 (12-58)||(50086107-50086153)
chr1 (43-91)||(25869721-25869769)
chr1 (12-132)||(39420581-39420703)
chr1 (20-64)||(26040734-26040778)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-132)||(352451-352571)
[»] chr4 (77 HSPs)
chr4 (20-130)||(35998115-35998225)
chr4 (27-130)||(39052906-39053009)
chr4 (26-180)||(44633105-44633259)
chr4 (29-132)||(55360355-55360458)
chr4 (20-234)||(42051654-42051870)
chr4 (16-180)||(28279786-28279950)
chr4 (280-478)||(28940695-28940893)
chr4 (26-132)||(32949853-32949959)
chr4 (59-170)||(29550764-29550875)
chr4 (12-171)||(38319869-38320028)
chr4 (26-132)||(10099729-10099835)
chr4 (13-130)||(34790942-34791060)
chr4 (12-125)||(48400621-48400734)
chr4 (37-132)||(22872403-22872498)
chr4 (27-132)||(3505719-3505823)
chr4 (12-101)||(35029063-35029152)
chr4 (12-159)||(25149421-25149569)
chr4 (12-132)||(28330791-28330911)
chr4 (54-228)||(36047132-36047308)
chr4 (16-132)||(37786958-37787074)
chr4 (12-132)||(38160142-38160262)
chr4 (54-161)||(42132781-42132888)
chr4 (45-132)||(47277705-47277792)
chr4 (45-130)||(48740519-48740604)
chr4 (12-132)||(51076401-51076524)
chr4 (12-132)||(20964278-20964398)
chr4 (20-132)||(22020509-22020620)
chr4 (54-170)||(37315954-37316070)
chr4 (20-131)||(27977145-27977256)
chr4 (12-130)||(42544208-42544326)
chr4 (12-169)||(4354408-4354565)
chr4 (43-130)||(3686010-3686097)
chr4 (12-95)||(49401690-49401773)
chr4 (46-132)||(49218807-49218892)
chr4 (7-132)||(49448838-49448963)
chr4 (20-101)||(53848674-53848755)
chr4 (55-228)||(54217243-54217416)
chr4 (14-234)||(4360400-4360619)
chr4 (54-130)||(8759778-8759854)
chr4 (25-101)||(30680441-30680517)
chr4 (43-130)||(18849780-18849867)
chr4 (43-130)||(49306586-49306673)
chr4 (46-132)||(11583895-11583981)
chr4 (64-130)||(29644354-29644420)
chr4 (15-101)||(33093453-33093538)
chr4 (64-130)||(37309697-37309763)
chr4 (64-130)||(41710186-41710252)
chr4 (26-95)||(55293509-55293579)
chr4 (63-132)||(5499470-5499539)
chr4 (63-132)||(25250634-25250703)
chr4 (375-463)||(17346341-17346429)
chr4 (45-169)||(41436441-41436565)
chr4 (16-132)||(46958719-46958834)
chr4 (64-132)||(47846896-47846964)
chr4 (64-132)||(51572270-51572338)
chr4 (20-95)||(25902460-25902535)
chr4 (43-130)||(39979779-39979866)
chr4 (43-130)||(41203736-41203823)
chr4 (27-93)||(13719811-13719877)
chr4 (64-130)||(26799258-26799324)
chr4 (64-130)||(38976990-38977056)
chr4 (63-132)||(9052091-9052160)
chr4 (27-132)||(29990478-29990582)
chr4 (66-130)||(1825292-1825356)
chr4 (64-132)||(17237040-17237108)
chr4 (20-80)||(17317668-17317728)
chr4 (12-132)||(40020938-40021058)
chr4 (43-130)||(28974305-28974392)
chr4 (371-446)||(42015289-42015364)
chr4 (64-130)||(1796284-1796350)
chr4 (21-87)||(5291706-5291772)
chr4 (64-130)||(39258314-39258380)
chr4 (64-130)||(54729526-54729591)
chr4 (12-101)||(13529890-13529978)
chr4 (63-120)||(25125117-25125174)
chr4 (12-132)||(29136779-29136899)
chr4 (82-130)||(29815157-29815205)
[»] chr5 (71 HSPs)
chr5 (7-132)||(5357803-5357928)
chr5 (12-228)||(39060945-39061161)
chr5 (20-236)||(36006891-36007104)
chr5 (12-169)||(10044629-10044785)
chr5 (12-132)||(25111139-25111259)
chr5 (12-132)||(25170230-25170350)
chr5 (12-132)||(15898188-15898308)
chr5 (12-131)||(13087733-13087851)
chr5 (12-171)||(31090262-31090421)
chr5 (12-132)||(25108570-25108690)
chr5 (12-132)||(25167662-25167782)
chr5 (14-97)||(5147489-5147572)
chr5 (12-131)||(13016355-13016473)
chr5 (62-132)||(19889574-19889644)
chr5 (47-169)||(42818864-42818985)
chr5 (46-128)||(38978905-38978987)
chr5 (42-95)||(4044498-4044551)
chr5 (63-132)||(31956727-31956796)
chr5 (26-91)||(35968758-35968823)
chr5 (15-95)||(16926085-16926165)
chr5 (7-130)||(33988199-33988322)
chr5 (62-237)||(43525372-43525545)
chr5 (26-171)||(6629398-6629543)
chr5 (12-130)||(35646080-35646198)
chr5 (63-132)||(16883973-16884042)
chr5 (43-123)||(791982-792062)
chr5 (54-130)||(20189891-20189967)
chr5 (7-91)||(39060408-39060492)
chr5 (64-132)||(39183670-39183738)
chr5 (7-130)||(6610836-6610959)
chr5 (43-130)||(8369718-8369805)
chr5 (12-132)||(17741160-17741284)
chr5 (66-132)||(34534919-34534985)
chr5 (42-132)||(35988631-35988721)
chr5 (20-132)||(15254762-15254874)
chr5 (64-132)||(17699330-17699398)
chr5 (63-131)||(32659814-32659882)
chr5 (20-132)||(36469093-36469205)
chr5 (63-170)||(72147-72254)
chr5 (46-132)||(7871311-7871396)
chr5 (12-130)||(11099468-11099586)
chr5 (64-130)||(17242997-17243063)
chr5 (63-132)||(5072947-5073016)
chr5 (63-120)||(7311222-7311279)
chr5 (26-95)||(16954899-16954967)
chr5 (63-132)||(39212593-39212662)
chr5 (46-130)||(858334-858418)
chr5 (62-122)||(15564929-15564989)
chr5 (26-86)||(30437744-30437804)
chr5 (43-130)||(3725185-3725272)
chr5 (43-130)||(7613706-7613793)
chr5 (63-173)||(14184091-14184201)
chr5 (54-173)||(39035888-39036007)
chr5 (63-121)||(25344780-25344838)
chr5 (64-130)||(35334569-35334635)
chr5 (12-130)||(42575629-42575747)
chr5 (63-132)||(6173022-6173091)
chr5 (43-171)||(8692840-8692968)
chr5 (64-132)||(16283630-16283698)
chr5 (43-130)||(41184116-41184203)
chr5 (12-86)||(4194975-4195049)
chr5 (43-129)||(6735379-6735465)
chr5 (64-130)||(13135752-13135818)
chr5 (83-173)||(13422414-13422503)
chr5 (69-118)||(146748-146797)
chr5 (43-124)||(6239118-6239199)
chr5 (26-111)||(31196337-31196422)
chr5 (63-128)||(42158688-42158753)
chr5 (12-87)||(20364580-20364656)
chr5 (63-95)||(22398313-22398345)
chr5 (43-95)||(25814398-25814450)
[»] scaffold0262 (1 HSPs)
scaffold0262 (21-131)||(12435-12545)
[»] scaffold0086 (1 HSPs)
scaffold0086 (12-130)||(5817-5935)
[»] scaffold0221 (2 HSPs)
scaffold0221 (12-132)||(10781-10901)
scaffold0221 (45-130)||(8886-8971)
[»] scaffold0155 (1 HSPs)
scaffold0155 (46-169)||(7978-8101)
[»] scaffold0020 (1 HSPs)
scaffold0020 (63-132)||(171223-171292)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-113)||(220009-220110)
[»] scaffold0006 (1 HSPs)
scaffold0006 (43-130)||(229822-229909)
[»] scaffold0001 (1 HSPs)
scaffold0001 (43-130)||(394777-394864)
[»] scaffold0576 (1 HSPs)
scaffold0576 (12-101)||(593-681)
[»] scaffold0007 (1 HSPs)
scaffold0007 (50-130)||(230255-230335)
[»] scaffold0034 (1 HSPs)
scaffold0034 (68-130)||(98824-98886)
[»] scaffold0058 (1 HSPs)
scaffold0058 (66-130)||(14455-14519)
[»] scaffold0028 (1 HSPs)
scaffold0028 (43-130)||(26612-26699)


Alignment Details
Target: chr3 (Bit Score: 392; Significance: 0; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 12 - 478
Target Start/End: Original strand, 53754054 - 53754521
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  53754054 agagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattaagaatagtaaaagta 53754153  T
Q  112 atattaattagagttataattnnnnnnnng-taattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactc 210  Q
     ||||||||||||||||||||          |||||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||    
T  53754154 gtattaattagagttataattgaaaaaaaaataattaatgttgtattgaaaactgaaatgagtcaagattactgtgacaataattttttataaatgactc 53754253  T
Q  211 agttattacgggacggagcgagtataaaagaaggcaagttaattaattgtatcataccgtatggttggacttgtaccaatcaccaataaggacagtgtaa 310  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53754254 agttattatgggacggagcgagtataaaagaaggcaagttaattaattgtatcataccgtatggttggacttgtaccaatcaccaataaggacagtgtaa 53754353  T
Q  311 tctccagctggttcagggaaagggactggaattctaggtctactgagtatcctaatgcctccaaaaccaccagctgctttttgaaatgctagagatggaa 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53754354 tctccagctggttcagggaaagggactggaattctaggtctactgagtatcctaatgcctccaaaaccaccagctgctttttgaaatgctagagatggaa 53754453  T
Q  411 agtagtaaaagcttccaatttgatccttcacttgaagaatatatgtgaagttcctccctggtgggatg 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53754454 agtagtaaaagcttccaatttgatccttcacttgaagaatatatgtgaagttcctccctggtgggatg 53754521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 48409687 - 48409485
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||| |||||||  |||| || |||||| |||||||||||||    
T  48409687 ttttgagtgtctttgtcaagtattggtggattcttctttatcataaatgtaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagagt 48409588  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacg 225  Q
    |||||||        ||||||||||||||||||||||||||||||  | |||||| |   |||| || ||||||| ||||| ||||||||||||||||||    
T  48409587 tataattggaaaaaagtaattaatgttgtattgaaaactgaaatgggtcaagattcctaggacaatatttttttacaaatggctcagttattacgggacg 48409488  T
Q  226 gag 228  Q
    |||    
T  48409487 gag 48409485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 29858854 - 29858975
Alignment:
Q  12 agagagaga-aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||    
T  29858854 agagagagagaatggttttgagtgtttttgtcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattatgagtggtgaaagt 29858953  T
Q  111 aatattaattagagttataatt 132  Q
    | ||||||||||| ||||||||    
T  29858954 agtattaattagaattataatt 29858975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 51165069 - 51164950
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  51165069 agagagaaaaataattttgagtgtctttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatttggagtagtgaaagta 51164970  T
Q  112 ata-ttaattagagttataa 130  Q
     || ||||||||||||||||    
T  51164969 gtacttaattagagttataa 51164950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 41287379 - 41287259
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| | |||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||| ||||| || ||| ||    
T  41287379 agagagaaaaatggttttgactatctttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaatta 41287280  T
Q  112 atattaattagagttataatt 132  Q
    |||||||||||||||||||||    
T  41287279 atattaattagagttataatt 41287259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 1334771 - 1334889
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||| ||||||| || ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||    
T  1334771 agagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagta 1334870  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  1334871 gtattaattagagttataa 1334889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 21585402 - 21585520
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| |||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||| |||||||||||| |||   ||| || ||||||||    
T  21585402 agagaaaaatgattttgagtgtctttgttaattattggttcattcttctttatcataaatgtaaaatagaatatattgtattggaagtggtgaaagtaat 21585501  T
Q  114 attaattagagttataatt 132  Q
    |||||||||||||||||||    
T  21585502 attaattagagttataatt 21585520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 54021448 - 54021566
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||||||||  ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||  |||| || ||||||    
T  54021448 agagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgtaaagtagaatatattgaattcggagtggtgaaagta 54021547  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||| ||||||    
T  54021548 gtattaattagaattataa 54021566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 53051143 - 53050975
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||| ||||  |||||||| || ||||||| |||||||||||||||||||| |||||||||||||  |||| || ||||||    
T  53051143 agagagaaaaatagttttgagtgcctttttcaagtatttgtgcattcttgtttatcataaatgtaaagtataatatattgaattgggagttgtgaaagta 53051044  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
     ||||||||||||||||||||        ||||||||| ||| |||||||| ||||||| || ||||||    
T  53051043 gtattaattagagttataattggagaaaagtaattaatattgcattgaaaagtgaaatggatcaagatt 53050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 38600796 - 38600914
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||  ||||  ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |  ||||  | ||||||    
T  38600796 agagagaaaaatgattttgagtccctttatcaagtattggtgcattcttctttaccataaatgtaaagtataatatattgaactgggagtgatgaaagta 38600895  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  38600896 gtattaattagagttataa 38600914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 32977810 - 32977938
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnng 141  Q
    ||||||||| | |||| |||||||||||||||||||  |||||||||||||||| ||||| || |||||| ||||||||||||||||||||             
T  32977810 caagtattgatgcatttttctttatcataaatgtaatttagaatatattgaattgagagttgtgaaagtagtattaattagagttataattggagaaaaa 32977909  T
Q  142 taattaatgttgtattgaaaactgaaatg 170  Q
    |||||||||||| |||||||| |||||||    
T  32977910 taattaatgttgcattgaaaagtgaaatg 32977938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 39329771 - 39329899
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||  | |||||| ||||||||||| ||||||||        ||    
T  39329771 aagtattggtgcattctttcttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaattagaattataattggaaaaaagt 39329870  T
Q  143 aattaatgttgtattgaaaactgaaatga 171  Q
    ||||| |||||||||||||| ||||||||    
T  39329871 aattattgttgtattgaaaagtgaaatga 39329899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 46194244 - 46194354
Alignment:
Q  60 tctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattga 159  Q
    ||||||||||||||| |||||||||||||||||||| ||||| || |||||| |||||||||| |||||||||        ||||||||| |||||||||    
T  46194244 tctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattga 46194343  T
Q  160 aaactgaaatg 170  Q
    ||| |||||||    
T  46194344 aaagtgaaatg 46194354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 50736183 - 50736003
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnng 141  Q
    ||||||||||| |||||||||||||     || | |||||||||||||||||||   |||||| |||||| ||||||||||||||||| ||        |    
T  50736183 caagtattggtgcattcttctttat-----atatcaagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaag 50736089  T
Q  142 taattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacgga 227  Q
    ||||||||||| |||||||||||||||||| | ||||||   | || | || ||||||| |||| ||||| |||||||||||||||    
T  50736088 taattaatgttctattgaaaactgaaatgagtcaagatttatgcgataatatttttttacaaataactcaattattacgggacgga 50736003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 50776672 - 50776852
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnng 141  Q
    ||||||||||| |||||||||||||     || | |||||||||||||||||||   |||||| |||||| ||||||||||||||||| ||        |    
T  50776672 caagtattggtgcattcttctttat-----atatcaagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaag 50776766  T
Q  142 taattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacgga 227  Q
    ||||||||||| |||||||||||||||||| | ||||||   | || | || ||||||| |||| ||||| |||||||||||||||    
T  50776767 taattaatgttctattgaaaactgaaatgagtcaagatttatgcgataatatttttttacaaataactcaattattacgggacgga 50776852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 1923171 - 1923087
Alignment:
Q  48 ttggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||  |||| || |||||| |||||||||| |||||||||    
T  1923171 ttggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataatt 1923087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 47496242 - 47496141
Alignment:
Q  56 ttcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgta 155  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||  | |||||| ||||||||||||||||||||        |||||||||||||||    
T  47496242 ttcttttttatcataaatgtaaagtctaatatattgaattaagagtgatgaaagtagtattaattagagttataatttgaaaaaagtaattaatgttgta 47496143  T
Q  156 tt 157  Q
    ||    
T  47496142 tt 47496141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 9218231 - 9218144
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||||  |||||||||||| ||||||||||||| |||||| |||||  | |||||| ||||||||||||||||||    
T  9218231 aagtattggtgcattctttcttatcataaatgcaaagtagaatataatgaattgagagtgatgaaagtagtattaattagagttataa 9218144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 11529132 - 11529218
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||| |||||||| |  ||||||||||| ||||| ||||||||| ||||| ||||  ||||||||||||||||||||||||||    
T  11529132 aagtattgatacattctccaatatcataaatgcaaagtggaatatattaaattatgagtgataaaagtaatattaattagagttata 11529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 27668368 - 27668437
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| |||||  |||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  27668368 ttatcataaatgcaaagtgaaatatattgaattaagagtgataaaagtagtattaattagagttataatt 27668437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 21296524 - 21296652
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| |||| |||  ||||||||||| ||||||||||||||||||||   ||| || |||||| ||||||||||||||||||          ||    
T  21296524 aagtattggtgcatttttcactatcataaatgcaaagtagaatatattgaattggaagttgtgaaagtagtattaattagagttataaaaggaaaaaagt 21296623  T
Q  143 aattaatgttgtattgaaaactgaaatga 171  Q
    ||||||| |||||||||||| ||||||||    
T  21296624 aattaatattgtattgaaaagtgaaatga 21296652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 32023122 - 32023209
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||| ||||||| ||||| |||||||||||||| |||||  | |||||||||||||||||||||||||    
T  32023122 aagtattggtgcattctccactattataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataa 32023209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 30261521 - 30261650
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaag-agtagtaaaagtaatattaattagagttataattnnnnnnnn 140  Q
    ||||||||||| ||||| |  |||||||||||||||||| ||||||||||||||  | |||  | |||||| ||||||||||||||||||||            
T  30261521 caagtattggtgcattccttcttatcataaatgtaaagtggaatatattgaatttgggagtgatgaaagtagtattaattagagttataattaggaaaaa 30261620  T
Q  141 gtaattaatgttgtattgaaaactgaaatg 170  Q
    ||||||| | |||||||||||| |||||||    
T  30261621 gtaattattattgtattgaaaagtgaaatg 30261650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 36315723 - 36315784
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaat 73  Q
    ||||||| ||| ||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  36315723 agagagaaaaacgatttcgagtgtctttgttaagtattggtacattcttctttatcataaat 36315784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 3862171 - 3862282
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| |||||||||||||| | |||| |||| | |||||  | |||||||||||| ||| || |||||| |||||| |||||  | ||||||||||||||    
T  3862171 aaattattttgagtgtctt-gtcaaggattgatgcattccacattatcataaatgcaaattaaaatatactgaattgagagtgatgaaagtaatattaat 3862269  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  3862270 tagagttataatt 3862282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 42547127 - 42547255
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| |||||||  |||||||||||| |||  |||||||||||||||  ||||  | |||||| |||||||||||| |||||||         |    
T  42547127 aagtattggtgcattctttcttatcataaatgcaaaagagaatatattgaattgggagtgatgaaagtagtattaattagagctataatttgaataaaat 42547226  T
Q  143 aattaatgttgtattgaaaactgaaatga 171  Q
    ||||| |||||||||||||| ||||||||    
T  42547227 aattattgttgtattgaaaagtgaaatga 42547255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 44219027 - 44219143
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| ||||| |||||||||||||  | |||| ||||| |||||  | |||||||||||  ||||||||||||||||||||   |||| | ||| || |    
T  44219027 agagaaaaatggttttgagtgtctt--gtaagtgttggtgcattccccattatcataaatacaaagtagaatatattgaattggaagtaatgaaaatagt 44219124  T
Q  114 attaattagagttataatt 132  Q
    |||||||||||||||||||    
T  44219125 attaattagagttataatt 44219143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 54845558 - 54845624
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| |||||||||||||||  |||| | |||||| ||||||||||||||||||    
T  54845558 tatcataaatgcaaagtggaatatattgaattagaagtaatgaaagtagtattaattagagttataa 54845624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 45746428 - 45746363
Alignment:
Q  67 cataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| |||||||||||||| || ||||||||  | |||||| ||||||||||||||||||||    
T  45746428 cataaatgcaaagtagaatatatggagttaagagtgatgaaagtagtattaattagagttataatt 45746363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 39144742 - 39144686
Alignment:
Q  32 gtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatata 88  Q
    |||||||||  |||||||||| |||||| |||||||||| |||||||||||||||||    
T  39144742 gtgtctttgttaagtattggtgcattctcctttatcatagatgtaaagtagaatata 39144686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 33994743 - 33994656
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||||||||| |||||||||||| | ||| |  | |||||  ||||||||||||||||||    
T  33994743 aagtattggtgcattctccactatcataaatgtaaagtggaatatattgaactgagaatgatgaaagtggtattaattagagttataa 33994656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 45241071 - 45241008
Alignment:
Q  69 taaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||| ||||||||||| |||||| |||||||  |||||||| ||||||||| ||||||||||    
T  45241071 taaatgcaaagtagaatacattgaactaagagtgataaaagtagtattaattatagttataatt 45241008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 52325261 - 52325174
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| |||||| |  ||||||||||| ||||| |||||||||||||| ||| |    |||||| ||||||||||||||||||||    
T  52325261 gtattggtgcattctacgctatcataaatgcaaagtggaatatattgaattgagaatgacgaaagtagtattaattagagttataatt 52325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 54458307 - 54458382
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||||||||| ||||  ||||  |||||| ||| |||||| | |||||||||||||||||| ||||||||||||||    
T  54458307 aaatgattttaagtgattttgttaagtatgggtgcattctccattatcataaatgtaaagtggaatatattgaatt 54458382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 53876478 - 53876544
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||||||  ||||||||||||| |||||  | ||||||| |||||||||| ||||||    
T  53876478 tatcataaatgtaaagtgaaatatattgaattgagagtgatgaaagtaaaattaattagaattataa 53876544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 8498371 - 8498254
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| | || ||||||||||| || |  |||||||||| ||||| || ||| | |||||| | |||| ||||||||||||| ||||| |||||||||    
T  8498371 agagagaaatataattttgagtgttttggttaagtattggtgcattcctccttaccttaaatgcagagtaaaatatattgaattgagagtggtaaaagta 8498272  T
Q  112 atattaattagagttata 129  Q
      |||| ||| |||||||    
T  8498271 gaattacttatagttata 8498254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 32827327 - 32827412
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||| |||||| |  |||||||||||||||||  ||||||||||||||  | |  | |||||| ||||||||||||||||||    
T  32827327 gtattggtgcattctccactatcataaatgtaaagtgaaatatattgaattagaaatgatgaaagtagtattaattagagttataa 32827412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 34081076 - 34081165
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| |||||||| |  ||| ||||||||||||||| |||||||| |||| ||| |  |||||||| ||||||||| | ||||||||    
T  34081076 aagtattagtacattccttcttaccataaatgtaaagtataatatattaaattgagaatgataaaagtagtattaattaaatttataatt 34081165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 5245498 - 5245411
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||  ||||| |||||||||||||| |||||  | |||||  ||||||||||||||||||    
T  5245498 aagtattggtgtattctccaatatcataaatacaaagtggaatatattgaattgagagtgatgaaagtggtattaattagagttataa 5245411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 8706268 - 8706145
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatat--tgaattaagagtagt 104  Q
    |||| |||||||||||||||||| ||||   |||  |||||||| | ||||||||     |||||||| ||||| ||||||||  |||| |||||||  |    
T  8706268 gaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattcttca----cataaatgcaaagtggaatatatattgaactaagagtgat 8706173  T
Q  105 aaaagtaatattaattagagttataatt 132  Q
     |||||| ||||||||||||||||||||    
T  8706172 gaaagtagtattaattagagttataatt 8706145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 9058155 - 9058032
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatat--tgaattaagagtagt 104  Q
    |||| |||||||||||||||||| ||||   |||  |||||||| | ||||||||     |||||||| ||||| ||||||||  |||| |||||||  |    
T  9058155 gaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattcttca----cataaatgcaaagtggaatatatattgaactaagagtgat 9058060  T
Q  105 aaaagtaatattaattagagttataatt 132  Q
     |||||| ||||||||||||||||||||    
T  9058059 gaaagtagtattaattagagttataatt 9058032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 49122174 - 49122213
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  49122174 tttatcataaatgcaaagtagaatatattgaattatgagt 49122213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 54122245 - 54122332
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||| |||||  |||||||||||||   ||| || |||||| |||| |||||||||||||    
T  54122245 aagtattggtgcattctccactatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattgattagagttataa 54122332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 15280670 - 15280604
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||  ||||  | |||||| |||||||||| |||||||    
T  15280670 tatcataaatggaaagtggaatatattgaattgggagtgatgaaagtagtattaattagggttataa 15280604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 17777039 - 17777101
Alignment:
Q  67 cataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||| ||||| |||||||||||||  |||||  | ||| ||||||||||||||||||||    
T  17777039 cataaatgcaaagtggaatatattgaatcgagagtgatgaaaataatattaattagagttata 17777101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 19078340 - 19078402
Alignment:
Q  67 cataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||| ||||| |||||||||||||  |||||  | ||| ||||||||||||||||||||    
T  19078340 cataaatgcaaagtggaatatattgaatcgagagtgatgaaaataatattaattagagttata 19078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 35300714 - 35300672
Alignment:
Q  52 tacattcttctttatcataaatgtaaagtagaatatattgaat 94  Q
    ||||||| || ||||||||||||||||||| ||||||||||||    
T  35300714 tacattcatcgttatcataaatgtaaagtaaaatatattgaat 35300672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 43639558 - 43639624
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| |||||  |||||||||||||   ||| || |||||| ||||||||||||||||||    
T  43639558 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattaattagagttataa 43639624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 50150411 - 50150477
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||| || |||||||| ||||  |||| || ||| |||||||||||||| ||||||||    
T  50150411 tcataaatgtaaattaaaatatattaaattgggagtggtgaaaataatattaattagaattataatt 50150477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 9218072 - 9218039
Alignment:
Q  202 aaatgactcagttattacgggacggagcgagtat 235  Q
    ||||||||||||||||||||||||||| ||||||    
T  9218072 aaatgactcagttattacgggacggagggagtat 9218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 53583580 - 53583633
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||||| | |||||||| |||| ||||||| |||||||||||||| |||||    
T  53583580 caagtattgatgcattcttcattattataaatgcaaagtagaatatatggaatt 53583633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 14756135 - 14756187
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||| ||||||||||| |  ||||||||||| ||||||||||||||| ||||    
T  14756135 aagtactggtacattctccactatcataaatgcaaagtagaatatattaaatt 14756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 29807126 - 29807190
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtta 127  Q
    |||||||||||||||| || ||||||||||||| | |||  ||||| ||||||||| | ||||||    
T  29807126 ttatcataaatgtaaaataaaatatattgaattgaaagtgataaaaataatattaactcgagtta 29807190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 31651024 - 31650945
Alignment:
Q  15 gagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||| |||||||||| |||||||| | |||||||| || |||| ||| |||||||||||  ||| ||||||||||| ||||    
T  31651024 gagaaaaatgattttaagtgtctt-gtcaagtatttgtgcatttttcattatcataaatacaaattagaatatattaaatt 31650945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 36097703 - 36097763
Alignment:
Q  70 aaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||| ||||| |||||||||||||| |||||  | |||||||||||||| || |||||||    
T  36097703 aaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaatcagcgttataa 36097763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 44234176 - 44234124
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||||||||||| |||||| ||||| |||||| |||||  |||||||||||||    
T  44234176 aagtattggtacgttcttcattatcgtaaatgcaaagtgaaatatattgaatt 44234124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 47496112 - 47496072
Alignment:
Q  194 ttttttataaatgactcagttattacgggacggagcgagta 234  Q
    ||||||| |||||||||||||||||| |||||||| |||||    
T  47496112 ttttttacaaatgactcagttattacaggacggagggagta 47496072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 40077748 - 40077955
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||    
T  40077748 aaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatttggagttgtgaaagtaatattaat 40077847  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattac 219  Q
    | |||||||||||        ||||||||||||||||  ||||||||||||  | ||||||   | |||| || ||||||  |||||| ||||||||| |    
T  40077848 ttgagttataattgaaaaaaagtaattaatgttgtatcaaaaactgaaatgggtcaagatttttgagacaatattttttttaaaatgattcagttatttc 40077947  T
Q  220 gggacgga 227  Q
    ||||||||    
T  40077948 gggacgga 40077955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 29638416 - 29638260
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| ||||| |||||| || ||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||| || ||||||||    
T  29638416 agagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaatgtaaagtataatatattgaattaggagtggtgaaagtaat 29638317  T
Q  114 attaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||||||||||||||        |||||||||||||||||||||| |||||||    
T  29638316 attaattagagttataattgagaaaaggtaattaatgttgtattgaaaagtgaaatg 29638260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 14690077 - 14689854
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| ||||||||||| ||  ||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||| || ||||||    
T  14690077 agagagaaaaatggttttgagtgtccttatcaactattggtgcattcttttttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagta 14689978  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactca 211  Q
     |||||||||| |||||||||        ||||||||| |||||||||||| |||||||  | ||  || | | |||| || ||||||  ||||||||||    
T  14689977 gtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgggtcaatttttctgggacaatatttttttgcaaatgactca 14689878  T
Q  212 gttattacgggacggagcgagtat 235  Q
    ||||||| ||||||||| ||||||    
T  14689877 gttattatgggacggagggagtat 14689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 28791425 - 28791267
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||| ||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||| || ||||||    
T  28791425 agagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatgtaaactagaatatattgaattgggagttgtgaaagta 28791326  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
     ||||||||||||||||||||        ||||||||||||| |||||||| |||||||    
T  28791325 gtattaattagagttataattggagaaaagtaattaatgttgcattgaaaagtgaaatg 28791267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 32679136 - 32678994
Alignment:
Q  28 ttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtta 127  Q
    ||||||| ||||  ||||||||||| |||| ||||||||||||||||||||||| |||||||| |||| ||||| ||||||||| |||||||||||||||    
T  32679136 ttgagtgcctttttcaagtattggtgcattattctttatcataaatgtaaagtaaaatatattaaattgagagttgtaaaagtagtattaattagagtta 32679037  T
Q  128 taattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||        |||||||||||||||||||||| |||||||    
T  32679036 taattgaaaaaaggtaattaatgttgtattgaaaagtgaaatg 32678994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 11637256 - 11637140
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  11637256 agagagaaaaatg-ttttgagtgtctttgccaagtattgatacattattctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagta 11637158  T
Q  112 atattaattagagttata 129  Q
     ||||||||| |||||||    
T  11637157 gtattaattatagttata 11637140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 14117565 - 14117411
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||| ||||  |||||||||||  |||||||||||||||||||||||||| |||||||||||||| | ||| || ||||||||||||||||||||    
T  14117565 ttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagttgaatatattgaattgaaagttgtgaaagtaatattaattagagt 14117466  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
    |||||||          |||||||||||||||||||| |||||||| | ||||||    
T  14117465 tataattgaaaaaaaaaaattaatgttgtattgaaaagtgaaatgagtcaagatt 14117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 39998280 - 39998171
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||||||| |||||||||  |||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  39998280 agagagaaaaatgattttaagtgtctttatcaagtatttgagcattcttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagta 39998181  T
Q  112 atattaatta 121  Q
     |||||||||    
T  39998180 gtattaatta 39998171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 41726624 - 41726479
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||| ||||  ||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||| || ||| || ||||||||| |||    
T  41726624 ttttgagtgcctttttcaagtattgttgcattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaattagtattaattacagt 41726525  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    |||||||        ||||||||| |||||||||||| ||||||||    
T  41726524 tataattgaaaaaaagtaattaatattgtattgaaaagtgaaatga 41726479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 886438 - 886597
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||| ||||||| ||||| |||| ||  ||| |||  || ||||||||||||||||||||| |||||||||||||| ||||| ||| |  ||||||||    
T  886438 agagagggaaatgagtttgattgtccttatcaactatctgtgcattcttctttatcataaatgcaaagtagaatatatcgaattgagaatgataaaagta 886537  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    ||||||||||| |||||||||        ||||||||| |||||||||||| ||||||||    
T  886538 atattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtgaaatga 886597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 41759628 - 41759739
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||||| |||||||||| ||| ||| ||||||| ||||||||||||||||||||  |||||| |||||||||||||  ||||||| ||||||||||||||    
T  41759628 aaatgagtttgagtgtccttgtcaattattggtgcattcttctttatcataaatacaaagtaaaatatattgaattgggagtagtgaaagtaatattaat 41759727  T
Q  120 tagagttataat 131  Q
    ||  ||||||||    
T  41759728 taatgttataat 41759739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 2195584 - 2195427
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||||||| |  |||||||||| |||||||  |||||||||||| ||||||||||||||||||||  ||||  | ||||||    
T  2195584 agagagaaaaatagttttgagtgtctt-gttaagtattggtgcattctttcttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagta 2195486  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
     ||||||||||||||||||||        ||||||| |||||||||||||| |||||||    
T  2195485 gtattaattagagttataattggaaaaaagtaattattgttgtattgaaaagtgaaatg 2195427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 8418311 - 8418412
Alignment:
Q  31 agtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||| |||| ||||||||| | |||| |||||||||||||||||||||||||||||| |||||| |||||  | |||||| ||||||||||||||||||    
T  8418311 agtgtttttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagttataa 8418410  T
Q  131 tt 132  Q
    ||    
T  8418411 tt 8418412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 1494241 - 1494356
Alignment:
Q  15 gagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaata 114  Q
    |||| ||||||||||||||| | ||  ||| ||||| | ||||||||||||||||||||| |||||||||||||||  ||||  |||||| |||||||||    
T  1494241 gagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcataaatgcaaagtagaatatatt--attagaagtagtgaaagtaata 1494338  T
Q  115 ttaattagagttataatt 132  Q
    |||||||| |||||||||    
T  1494339 ttaattagtgttataatt 1494356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 2875110 - 2875196
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| |||||||||| |||||||||||| |||||||||||||||||||| |||| | | |||||| ||||||||||||||||||||    
T  2875110 tattgatacattcttccttatcataaatgcaaagtagaatatattgaatttagaggaatgaaagtagtattaattagagttataatt 2875196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 25174584 - 25174733
Alignment:
Q  21 aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    |||||||||||||| | ||   || ||||||| |||| |||||||| ||||||| |||||||||||||||||||| |||||||  |||||||||||||||    
T  25174584 aatgattttgagtgcccttattaactattggtgcattattctttattataaatgcaaagtagaatatattgaattgagagtagggaaagtaatattaatt 25174683  T
Q  121 agagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    || |||||| ||        ||||||||| || ||||||||| |||||||    
T  25174684 agtgttatagttggaaaaatgtaattaatattatattgaaaagtgaaatg 25174733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 45420929 - 45421088
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagt-aaaagt 110  Q
    ||||||| |||||  |||||||| | ||| ||| | ||||  ||||||||||||||||||||| |||||| |||||||||||| | |||| || ||||||    
T  45420929 agagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcataaatgcaaagtaaaatatattgaatcaggagtggtgaaaagt 45421028  T
Q  111 aatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    | |||||||||| |||||||||        ||||||||| |||||||||||| |||||||    
T  45421029 agtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatg 45421088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 2797115 - 2797037
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||  |||||||||||| ||||||||||||||||||||  ||||| | |||||||||||||||||||||||||||    
T  2797115 cattcttacttatcataaatgcaaagtagaatatattgaattgggagtaatgaaagtaatattaattagagttataatt 2797037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 14748738 - 14748816
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | || |||||| |||||||||| |||||||||    
T  14748738 cattcttctttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtattaattagtgttataatt 14748816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 2119799 - 2119715
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||  ||| || ||| ||| |||||||||||||||||    
T  2119799 tattggtacattcttcattatcataaatgtaaagtggaatatactgaattagaagttgtgaaaataagattaattagagttataa 2119715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 18725994 - 18725910
Alignment:
Q  44 agtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    ||||||| | |||| ||| |||| ||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||||    
T  18725994 agtattgatgcatttttcattattataaatgtaaagtagaatatatttaattaagagtaatgaaagtaatattaattaaagttat 18725910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 5392171 - 5392048
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||| |||| ||||  |||| ||||||||||| |||||| |  ||||||||||| ||||| ||||||||||||||  ||||  | |    
T  5392171 gaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgcattctccactatcataaatgcaaagtggaatatattgaattgggagtgttga 5392072  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||| ||||||||||||||||||    
T  5392071 aagtagtattaattagagttataa 5392048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 8618231 - 8618125
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    |||| ||||| ||||  |||||||||| |||| |||||||||||||||||||| || |||||||||||||   ||| |||||| || ||||||||| |||    
T  8618231 ttttaagtgtttttgttaagtattggtgcattattctttatcataaatgtaaaatataatatattgaattggaagtggtaaaaatagtattaattaaagt 8618132  T
Q  126 tataatt 132  Q
    |||||||    
T  8618131 tataatt 8618125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 5878217 - 5878305
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| ||||| |||| | |||||||| |||||||| || |||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  5878217 agagagaaaaatggttttaaatgtctttgtcaagtattagttcattctactt-atcataaatgtaaagtagaatatattgaattgagagt 5878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 18733470 - 18733393
Alignment:
Q  44 agtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatta 121  Q
    ||||||| |||||| ||| |||| ||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||    
T  18733470 agtattgatacatttttcattattataaatgcaaagtagaatatatttaattaagagtaattaaagtaatattaatta 18733393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 15559115 - 15559239
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||| | |||||||||| |||||  ||| |||||||||||  |||   | |||||||||||| ||||||||||||||||||||| ||||  | |    
T  15559115 gaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgcaaagtagaatatattgaattaggagtgatga 15559214  T
Q  107 aagtaatattaattagagttataat 131  Q
    ||||  |||||||||||||||||||    
T  15559215 aagtggtattaattagagttataat 15559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 43844897 - 43844992
Alignment:
Q  36 ctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||| |||||| | ||||  |||| || ||||||  |||||||||||||||||||    
T  43844897 ctttgtcaagtattggtatactcttctttatcataaatgtaaagtaaaatataattaatt-ggagttgttaaagtagaattaattagagttataatt 43844992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 32241409 - 32241532
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||| | |||||||||| |||||  |||  |||||||| | ||||||||  ||||||||||| ||||| ||||||| ||||||   ||| || |    
T  32241409 gaaggagagataaaaatgattttaagtgttcttgttaagtattgatgcattcttcactatcataaatgcaaagtggaatataatgaattggaagttgtga 32241508  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||||||||||||||||||||||    
T  32241509 aagtaatattaattagagttataa 32241532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 44790443 - 44790530
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||||||||| ||||||||||||||  || | || |||||| ||||||||||||||||||    
T  44790443 aagtattggtgcattctccactatcataaatgtaaagtggaatatattgaattgggaatggtgaaagtagtattaattagagttataa 44790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 7258387 - 7258477
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||||  || |||||||||||| ||| ||||||||||||||||  ||||  | |||||| ||||||||||||||||||||    
T  7258387 caagtattggtgcatttatcattatcataaatgcaaactagaatatattgaattgggagtgatgaaagtagtattaattagagttataatt 7258477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 38201382 - 38201499
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||| ||||||| ||||||   ||| |||| || ||||| | ||||||||||||| ||| |||| |||||||||||  ||||| | ||||||    
T  38201382 agagagaaaaataattttgaatgtcttat-caaatatttgtgcattcatttttatcataaatgcaaattagagtatattgaattgggagtaatgaaagta 38201480  T
Q  112 atattaattagagttataa 130  Q
    |||||||||||||||||||    
T  38201481 atattaattagagttataa 38201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 45197720 - 45197570
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||||||||| ||||| ||||  |||||||| | ||||||||  | ||||||||||||| |  ||||||||||||| |||||  | ||| || |||||||    
T  45197720 aaatgattttaagtgtttttgttaagtattgatgcattcttcactgtcataaatgtaaaatgaaatatattgaattgagagtgatgaaattactattaat 45197621  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    ||||| |||||||        ||||||||| |||||||||||| |||||||    
T  45197620 tagagctataatttaataaaagtaattaatattgtattgaaaagtgaaatg 45197570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 25266814 - 25266867
Alignment:
Q  35 tctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatata 88  Q
    |||||| || |||||||| |||||||||||||||||||||||||||||||||||    
T  25266814 tctttgtcatgtattggtgcattcttctttatcataaatgtaaagtagaatata 25266867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 31410650 - 31410715
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    ||||||||||| ||||| ||||||||||||||||||||| | |||||| ||||||||| |||||||    
T  31410650 tatcataaatgcaaagtggaatatattgaattaagagtaatgaaagtagtattaattaaagttata 31410715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 25267177 - 25267253
Alignment:
Q  142 taattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttatta 218  Q
    |||||||||||||||||||||||||||||  | |||||| |  ||||| || ||||||| |||||||||||||||||    
T  25267177 taattaatgttgtattgaaaactgaaatgggtcaagattcctatgacaatatttttttagaaatgactcagttatta 25267253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 4274341 - 4274448
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaac 163  Q
    ||||||||||| |||||  ||||||||||||| ||||| || ||| ||||||||||||||||||||| |        |||||||||| |||||||||||     
T  4274341 tatcataaatgcaaagtgaaatatattgaattgagagtggtgaaaataatattaattagagttataaatgaaaaaaagtaattaatgatgtattgaaaag 4274440  T
Q  164 tgaaatga 171  Q
     |||||||    
T  4274441 cgaaatga 4274448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 23765049 - 23764994
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||    
T  23765049 tattggtgcactcttctttatcataaatgtaaagtaaaatatattgaattgagagt 23764994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 32967298 - 32967385
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  |||||||||| |||||| |||||||||||||| ||| |  | |||||| ||||||||||||||||||    
T  32967298 aagtattggtccattctccactatcataaatttaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataa 32967385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 42558602 - 42558685
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    ||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||||||||  | |||||| ||||||||||||||    
T  42558602 aagtattggtttattctccactatcataaatgcaaagtggaatatattgaattaagagtgatgaaagtagtattaattagagtt 42558685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 44615386 - 44615473
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||| ||||||| |||||||||||||||||||| |||||  | ||| |||||||||||||||||||||    
T  44615386 aagtattggtgaattctccactattataaatgcaaagtagaatatattgaattgagagtgatgaaaataatattaattagagttataa 44615473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 325114 - 325208
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaata 114  Q
    ||||| |||||| || ||||| ||||||||||| |||||  | ||||||||||| |||||| |||||||||||||| |||||  ||||| |||||    
T  325114 aaatggttttgattgcctttgtcaagtattggtgcattcaccgttatcataaatataaagtggaatatattgaattgagagtgataaaattaata 325208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 10728927 - 10729032
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||| |  ||||||| || |||||||  |||||||||||| ||||| ||||||||||||||  ||||  | |||||| |||||||||||||    
T  10728927 ttttgagtgtctt-gttaagtatttgtgcattctttcttatcataaatgcaaagtggaatatattgaattgggagtgattaaagtagtattaattagagt 10729025  T
Q  126 tataatt 132  Q
    || ||||    
T  10729026 tacaatt 10729032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 32231768 - 32231910
Alignment:
Q  70 aaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    ||||| |||||| |||||||||||||  |||| || |||||| |||||||||| |||||||||        ||||||||| |||||||||||| ||||||    
T  32231768 aaatgcaaagtaaaatatattgaattgggagtggtgaaagtattattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaat 32231867  T
Q  170 gaataaagattacggtgacagtaattttttataaatgactcag 212  Q
    || | ||  ||   | |||| || |||||||||||||||||||    
T  32231868 gagtcaatttttttgggacaatatttttttataaatgactcag 32231910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 33743893 - 33743783
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||||  ||  ||| |||| || ||||||||||||||||||||  ||||||||||||||| ||||  ||||  | ||||||    
T  33743893 agagagaaaaatgggtttgagtgtacttatcaactatttgtgcattcttctttatcataaatacaaagtagaatatattaaattgtgagtgatgaaagta 33743794  T
Q  112 atattaattag 122  Q
    |||||||||||    
T  33743793 atattaattag 33743783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 42412407 - 42412493
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| |||||| | |||||||||||| ||||| ||||||||||||||  ||||  | |||||| |||||||||||| |||||||    
T  42412407 tattggtgcattctccattatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagctataatt 42412493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 1230403 - 1230472
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| |||||||||||||||||||| |||||  |  || |||||||||||| ||||||||||    
T  1230403 ttatcataaatgcaaagtagaatatattgaattgagagtgatggaaataatattaattaaagttataatt 1230472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 33826297 - 33826228
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||| ||||||||||||||| ||| |  | |||||| |||| |||||||||||||||    
T  33826297 ttatcataaatgtaaagcagaatatattgaattgagaatgatgaaagtagtattgattagagttataatt 33826228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 44225942 - 44226031
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||| ||||| | || |||||||||| ||||||||||||||| |||  ||||   | ||| |||||||||||||||||||||||    
T  44225942 aagtattggtgcattcattttcatcataaatgcaaagtagaatatattaaatagagagcgatgaaaataatattaattagagttataatt 44226031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 5962494 - 5962581
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||| ||||||| ||||| ||||||||||||||  ||||  | ||| |||||||||||||||||||||    
T  5962494 aagtattggtgcattctccactattataaatgcaaagtggaatatattgaattgggagtgatgaaattaatattaattagagttataa 5962581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 37459424 - 37459309
Alignment:
Q  55 attcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgt 154  Q
    |||||||||||||||||||| ||||| ||||||||| ||||  |||| || |||||| ||| ||||||  ||||||||        ||||||||| ||||    
T  37459424 attcttctttatcataaatgcaaagttgaatatattaaattgggagtggtgaaagtagtatcaattagtattataattagaaaaaagtaattaatattgt 37459325  T
Q  155 attgaaaactgaaatg 170  Q
    ||| |||| |||||||    
T  37459324 attaaaaagtgaaatg 37459309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 9734191 - 9734241
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaatta 96  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| |||||    
T  9734191 tattggtgcattcttctttatcataaatgcaaagtaaaatatattaaatta 9734241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 12653748 - 12653686
Alignment:
Q  68 ataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||| |||||||||||||| ||| |  | |||||||||||||| ||||||||||    
T  12653748 ataaatgtaaagtggaatatattgaattgagaatgatgaaagtaatattaatcagagttataa 12653686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 17006014 - 17005945
Alignment:
Q  60 tctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||| ||||||||||||||||||||  ||||  | ||||   ||||||||||||||||||||    
T  17006014 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaaag---tattaattagagttataatt 17005945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 17571234 - 17571303
Alignment:
Q  60 tctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||| ||||||||||||||||||||  ||||  | ||||   ||||||||||||||||||||    
T  17571234 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaaag---tattaattagagttataatt 17571303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 27868345 - 27868435
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||| | ||||  || |||||||||||| |||||||||||||||||||| ||| |  | |||||| ||||||||| | ||||||||    
T  27868345 caagtattgatccatttatcattatcataaatgcaaagtagaatatattgaattgagaatgatgaaagtagtattaattaaaattataatt 27868435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 28802832 - 28802766
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| |||||||||||||| |||||  | ||| || ||||||||||||||||||    
T  28802832 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaaatattattaattagagttataa 28802766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 33925130 - 33925192
Alignment:
Q  68 ataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||| ||||| |||||||||||||| | ||| || |||||| ||||||||||||||||||    
T  33925130 ataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 33925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 45425550 - 45425484
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||| ||||| || |  | |||||||||||||||||||||||||    
T  45425550 tatcataaatgcaaagtggaatatattaaattaggaatgatgaaagtaatattaattagagttataa 45425484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 5423154 - 5423263
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||||| ||| |||| ||||||  |||   | |||||||||||  ||||| ||| |||||||||| ||| |  ||||||||    
T  5423154 agagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccattatcataaatacaaagtggaagatattgaattgagaatgataaaagta 5423253  T
Q  112 atattaatta 121  Q
     |||||||||    
T  5423254 gtattaatta 5423263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 8394279 - 8394344
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||| |||||||||||||||  |||||| ||||||||||||| ||||| || ||||||    
T  8394279 tattggtgcattattctttatcataaatacaaagtaaaatatattgaattgagagtggtgaaagta 8394344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 27571661 - 27571580
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    |||||||||| ||| ||||||||||||| |||| |||||  | || |||||||||||||||  || |||||||||| |||||    
T  27571661 aaatgattttaagtatctttggcaagtaatggtgcattcaccattttcataaatgtaaagtgaaaaatattgaattgagagt 27571580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 34287119 - 34287228
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaa 161  Q
    |||||| |||||||||||| |||||||||||||||  | |  | |||||||||||||||||| ||||||          || ||||||||||||||||||    
T  34287119 tttatcgtaaatgtaaagtggaatatattgaattagaaatgatgaaagtaatattaattagaattataaaggaaaaaaagtgattaatgttgtattgaaa 34287218  T
Q  162 actgaaatga 171  Q
    | ||||||||    
T  34287219 agtgaaatga 34287228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 44975779 - 44975859
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatat--attgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| |||||||| ||||||||| |||||||||  |||||||| || ||  | |||||| ||||||||||||||||||||    
T  44975779 cattcctctttatcgtaaatgtaatgtagaatatgtattgaattgagcgtgatgaaagtagtattaattagagttataatt 44975859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 3384618 - 3384546
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatatta 117  Q
    ||||||||| |||||||  ||||||||||| ||||| |||||||||||||| | |||  | ||||||||||||    
T  3384618 gtattggtatattcttcactatcataaatgcaaagttgaatatattgaattgaaagtgatgaaagtaatatta 3384546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 26570142 - 26570210
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagt 80  Q
    |||||||||||| ||||||||||  |||| ||||||||| | ||||| || |||||||||||| |||||    
T  26570142 agagagagaaataattttgagtgattttgtcaagtattgatgcattcgtcattatcataaatgcaaagt 26570210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 26677156 - 26677067
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatat----tgaattaagagtagtaaaagtaatattaattagagttataat 131  Q
    ||||||| |||||  | |||||||||||| ||||||||||||||    ||||||||||||  | ||| |||||||||||| |||||||||    
T  26677156 tattggtgcattcaccattatcataaatgcaaagtagaatatataaattgaattaagagtgatgaaattaatattaattaaagttataat 26677067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 31132845 - 31132729
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| |||||||||| ||||   |||  ||||||||||| ||||| |  ||||||||||| ||| | ||||||| | |||| | ||| || |||||| |    
T  31132845 agagaaaaatgattttaagtgctcttgttaagtattggtatattctccagtatcataaatgcaaaatggaatataatcaattgaaagttgtgaaagtagt 31132746  T
Q  114 attaattagagttataa 130  Q
    |||||||||||||||||    
T  31132745 attaattagagttataa 31132729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 33190894 - 33191058
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||||||| |||||  |||  |||||||  | |||||| |  ||||||||||| | ||| ||||||||||||||   ||| || |    
T  33190894 gaagaagagagaaaaatgattttaagtgttcttgttaagtattaatgcattctccactatcataaatgcatagtggaatatattgaattggaagttgtga 33190993  T
Q  107 aagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    ||||| || |||||||||||||||          ||||||||| |||||||||||| ||||||||    
T  33190994 aagtagtactaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatga 33191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 32472181 - 32472130
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaa 93  Q
    |||||||| ||| ||||| | |||||||||||| ||||||||||||||||||    
T  32472181 caagtattagtatattctccattatcataaatgaaaagtagaatatattgaa 32472130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 37219785 - 37219872
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||| ||| |||||| | ||||||||||| ||||||  |||||||| |||| | ||| || |||||| |||||| |||||||||||    
T  37219785 aagtatgggtgcattctcccttatcataaatataaagtgaaatatattaaattgaaagttgtgaaagtattattaactagagttataa 37219872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 39171608 - 39171542
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||  ||||  | ||| || ||||||||||||||||||    
T  39171608 tatcataaatgcaaagtggaatatattgaattgtgagtgatgaaaatagtattaattagagttataa 39171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 29567271 - 29567202
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||  |||||| ||||||||| |||||||||  | |||||| ||||||||| | ||||||||    
T  29567271 ttatcataaatacaaagtaaaatatattgcattaagagttatgaaagtagtattaattaaatttataatt 29567202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 17790110 - 17790170
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattag 122  Q
    |||||||||||| |||||||||||||||||| ||   ||| || ||| |||||||||||||    
T  17790110 tttatcataaatataaagtagaatatattgatttggaagtggtgaaaataatattaattag 17790170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 29615861 - 29615797
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| ||||||||||||||  || |  | |||||| ||||||||| ||||||||    
T  29615861 tcataaatgtaaagtggaatatattgaattgggaatgatgaaagtagtattaattaaagttataa 29615797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 39416375 - 39416308
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||| | |||||| ||||||| | |||  ||||| |||||||||||||||||||||||    
T  39416375 tatcataaatgcaaattggaatat-ttgaattgaaagtgataaaactaatattaattagagttataatt 39416308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 234
Target Start/End: Original strand, 33921454 - 33921681
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||| |||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  33921454 gaaggagagagaaaaatggttttgagtgtgtttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtaa 33921553  T
Q  107 aagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatg 206  Q
    ||||| ||||||||||||||||||||        ||||||||| |||| ||| ||| |||||||  | ||  || | | |||| || ||||||| |||||    
T  33921554 aagtagtattaattagagttataattggaaaaaagtaattaatattgttttggaaagtgaaatgggtcaatttttctgggacaatatttttttaaaaatg 33921653  T
Q  207 actcagttattacgggacggagcgagta 234  Q
     ||||||||||||||||||||| |||||    
T  33921654 gctcagttattacgggacggagggagta 33921681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 3166098 - 3166319
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||||||||  ||||||||| |  ||| |||||||||||||||||||||||||||||||||||| | || | || ||||||    
T  3166098 agagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagtagaatatattgaatgaggattggtgaaagta 3166197  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactca 211  Q
     ||||||||||||||||||||        |||||||||||||||||||||| ||||||| || ||||||   | |||| | |||||||| |||||  |||    
T  3166198 gtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaattgaaatggatcaagattcttgggacaat-attttttacaaatggttca 3166296  T
Q  212 gttattacgggacggagcgagta 234  Q
    |||||||||| |||||| |||||    
T  3166297 gttattacggaacggagggagta 3166319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 33017948 - 33018054
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || |||||| |||||||||||||    
T  33017948 ttttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagt 33018047  T
Q  126 tataatt 132  Q
    |||||||    
T  33018048 tataatt 33018054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 3874048 - 3874189
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||    
T  3874048 aaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagttgaatatattgaattaggagtagtgaaagtaatatt-at 3874146  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaa 162  Q
    || || |||||||        |||||||||| |||||||||||    
T  3874147 tatagatataattggaaaaaagtaattaatgctgtattgaaaa 3874189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 8232332 - 8232495
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| | || |||||| ||||||||||| ||||||||        ||    
T  8232332 aagtattggtgcattcttctttatcataaatgtaaagta-aatatattgaattgagacttgtgaaagtactattaattagaattataattggaaaaaagt 8232430  T
Q  143 aattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatga 207  Q
    |||||||||||||||||||| ||||||| || ||||||   | |||| || ||||||||||||||    
T  8232431 aattaatgttgtattgaaaagtgaaatggatcaagattcttgagacaatatttttttataaatga 8232495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 9354430 - 9354553
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaata---tattgaattaagagtagtaaaa 108  Q
    ||||||| ||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||| |||||||||   |||||||||| |||| || |||    
T  9354430 agagagaaaaatggttttgagtgtctttgttaaatattggtccattcttctttatcataaatgtagagtagaatatactattgaattaggagttgtgaaa 9354529  T
Q  109 gtaatattaattagagttataatt 132  Q
    ||| ||||||||||||||||||||    
T  9354530 gtagtattaattagagttataatt 9354553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 15371855 - 15371973
Alignment:
Q  13 gagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaa 112  Q
    |||||| ||||| |||||||||||||   ||| |||| || ||||||||||||||||||||| ||||||||||||||||||||  |||| || ||||||     
T  15371855 gagagaaaaatggttttgagtgtcttat-caactattagtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtag 15371953  T
Q  113 tattaattagagttataatt 132  Q
    |||||||||| |||||||||    
T  15371954 tattaattagtgttataatt 15371973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 4552992 - 4552906
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||| ||||  |||| || ||||||||||||||||| |||||||||    
T  4552992 tattggtgcattcttctttatcataaatgcaaattagaatatattaaattgggagtggtgaaagtaatattaattagtgttataatt 4552906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 31265865 - 31265778
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||||||||| ||||||||||||||   ||| || |||||||||||||||||||||||||    
T  31265865 aagtattggtgcattctccactatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 31265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 15321249 - 15321335
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||||||| ||| |  | |||||| |||||||||| |||||||||    
T  15321249 tattggtgcgttcttctttatcataaatgcaaagtagaatatattgaattgagaatgttgaaagtagtattaattagtgttataatt 15321335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 34803703 - 34803854
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttat--cataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatatta 117  Q
    ||||| ||||||||||||||  ||| ||||| | ||||| |||||||  |||||||| ||| || ||||||||||||| ||||| || |||||| |||||    
T  34803703 aaatggttttgagtgtctttatcaactattgatgcattcctctttatatcataaatgcaaaataaaatatattgaattgagagttgtgaaagtagtatta 34803802  T
Q  118 attagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    |||| ||||||||||        |||||| || |||||||||||| ||||||    
T  34803803 attatagttataattgaaaaaaagtaattgatattgtattgaaaagtgaaat 34803854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 34915803 - 34915893
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagta 102  Q
    |||||||||||||||||| ||||| |  |  |||||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |||||    
T  34915803 agagagagaaatgattttaagtgtttacgttaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaattatgagta 34915893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 7301071 - 7301188
Alignment:
Q  13 gagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaa 112  Q
    |||||| ||||  |||| ||||| ||||  ||||||| || |||||| | |||||||||||||||||| |||||||||||||| | | |  | |||||||    
T  7301071 gagagaaaaatagttttaagtgtgtttgttaagtatttgtgcattctccattatcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtaa 7301170  T
Q  113 tattaattagagttataa 130  Q
    ||||| ||||||||||||    
T  7301171 tattagttagagttataa 7301188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 20027691 - 20027638
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaat 73  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  20027691 aaatgattttgagtgtctttgttaagtattggtgcattcttctttatcataaat 20027638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 15351417 - 15351493
Alignment:
Q  56 ttcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||  || |||||| |||||||||| ||| |||||    
T  15351417 ttcttctttatcataaatgcaaggtagaatatattgaattgagagcggtgaaagtagtattaattagtgttgtaatt 15351493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 20383953 - 20383843
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||||||| | ||||||||||| ||||| || ||||| |||||| ||| ||||||||| ||||||   |||| | ||||| ||||||||    
T  20383953 aaatggttttgagtgtctt-gtcaagtattggtgcattcctcattatcttaaatgaaaaatagaatata-tgaattggaagtacttaaagtgatattaat 20383856  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  20383855 tagagttataatt 20383843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 2310320 - 2310435
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttg 153  Q
    ||||||||||||||||||||| || ||| |||||||||||||  ||||  | |||||| |||||||||  |||||||||        ||||||||| |||    
T  2310320 cattcttctttatcataaatgcaaggtataatatattgaattgggagtgatgaaagtagtattaattaatgttataattgaaaaaaagtaattaatattg 2310419  T
Q  154 tattgaaaactgaaat 169  Q
    ||||||||| ||||||    
T  2310420 tattgaaaagtgaaat 2310435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 3604621 - 3604708
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| | ||||  |||||| ||||| ||||||||||||||   ||| || |||||||||||||||||||||||||    
T  3604621 aagtattggtgcattctccattattgtaaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 3604708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 9755168 - 9755255
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||||| |  ||||||||||||| |||||||||||||||||| | | |  | ||| |||||||||||| ||||||||    
T  9755168 aagtattggtacattctccactatcataaatgtagagtagaatatattgaattgaaaatgatgaaaataatattaattacagttataa 9755255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 34441950 - 34441851
Alignment:
Q  70 aaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    ||||||||| ||||||||||| ||||||||||  | |||||| ||||||||| ||||||||||        |||||||||||||||||||||| ||||||    
T  34441950 aaatgtaaattagaatatattaaattaagagtgatgaaagtagtattaattaaagttataatt-gaaaaaagtaattaatgttgtattgaaaagtgaaat 34441852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 14312646 - 14312755
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| |||| ||||| ||||  |||||||||| |||||| | ||||||||||||||||||  ||| ||||||||| |||||  | ||  || |||||||    
T  14312646 aaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtgaaatgtattgaattgagagtgatgaacatattattaat 14312745  T
Q  120 tagagttata 129  Q
    ||||||||||    
T  14312746 tagagttata 14312755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 15355691 - 15355603
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| || || |||||||||||||   ||| ||||||| ||||||||||||||||||||  ||||||||||||| |||||| |||||    
T  15355691 agagagaaaattggttttgagtgtcttat-caactattggtgcattcttctttatcataaatccaaagtagaatataatgaattgagagt 15355603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 28539082 - 28538993
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| || || ||||| |||| ||||||| ||||||||||||||| |||||| |||  | |||||  ||||||||||||||||||||    
T  28539082 aagtattagtgcaatcttccttattataaatgcaaagtagaatatattaaattaaaagtgatgaaagtggtattaattagagttataatt 28538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 15325220 - 15325144
Alignment:
Q  56 ttcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| |||||| |||||||||||||||| ||| ||||| || ||| || ||||||||||  ||||||||    
T  15325220 ttcttctttatcgtaaatgcaaagtagaatatattggattgagagtggtgaaactagtattaattagtattataatt 15325144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 7739559 - 7739622
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    |||| ||||||||||||||||| |||||||||| ||| |  |||||||| ||||||||||||||    
T  7739559 ttattataaatgtaaagtagaagatattgaattgagaatgataaaagtagtattaattagagtt 7739622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 30063995 - 30064057
Alignment:
Q  68 ataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||| ||||| ||||||||||||||  ||||  | |||||||||||||||||||||||||    
T  30063995 ataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 30064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 14306239 - 14306348
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| |||| ||||| ||||  |||||||||| |||||| | ||||||||||||||||||  ||| |||| |||| |||||  | ||  || |||||||    
T  14306239 aaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtgaaatgtattaaattgagagtgatgaacatattattaat 14306338  T
Q  120 tagagttata 129  Q
    ||||||||||    
T  14306339 tagagttata 14306348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 4238507 - 4238421
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| ||||||||  |||||||||||||||||  ||| ||||||||| | ||| ||  ||||| ||||||||| ||||||||    
T  4238507 aagtattggtgcattcttcactatcataaatgtaaagtgaaatctattgaattgaaagttgt-gaagtagtattaattaaagttataa 4238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 8569787 - 8569849
Alignment:
Q  70 aaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| |||||  |||||||| |||| ||||| || ||||||||||||||||||| |||||||    
T  8569787 aaatgcaaagtgaaatatattaaattgagagtggtgaaagtaatattaattagagctataatt 8569849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 34442187 - 34442134
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaag 79  Q
    |||||| |||| ||| | ||||||||| |||||||||||||||||||| |||||    
T  34442187 ttttgattgtccttgtctagtattggtgcattcttctttatcataaatataaag 34442134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 3e-43; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 18460597 - 18460400
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  18460597 aaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaatgtaaagtagaatatattgaattgagagttgtagaagtaatattaat 18460498  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttatt 217  Q
    |||||||||||||         |||||||||||||| ||||||  ||||| | | ||||||   | |||| || ||||| | ||||||||||||||||    
T  18460497 tagagttataattggaaaaaaataattaatgttgtagtgaaaagagaaattagtcaagattcttgggacaatattttttaacaaatgactcagttatt 18460400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 1908484 - 1908652
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||   ||| || ||| ||    
T  1908484 agagagaaaaatggttttgagtgtcttttgcaagtattagtgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaaata 1908583  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
    |||||||||||||||||||||        |||||||||||||||||||||| ||||||| || ||||||    
T  1908584 atattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatggatcaagatt 1908652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 7931500 - 7931644
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||  |||||||| || |||||||||||||||||||||||||||| ||||||||||||| ||||| || |||||| |||||||||||||    
T  7931500 ttttgagtgtctttttcaagtattagtgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagttgtgaaagtagtattaattagagt 7931599  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||        |||||||||||||||||||||| |||||||    
T  7931600 tataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatg 7931644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 9472530 - 9472381
Alignment:
Q  21 aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    |||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| | ||| || |||||| ||||||||    
T  9472530 aatggtttagagtgtctttgtcaagtattgatacattcttctttatcataaatgtatagtagaatatattgaattgatagtggtgaaagtagtattaatt 9472431  T
Q  121 agagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    | ||||||||||        || ||||||||||||||||||| |||||||    
T  9472430 atagttataattgaaaaaaagtgattaatgttgtattgaaaagtgaaatg 9472381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 24356214 - 24356070
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||| ||||  ||||||||| | |||||||||||||||||||||||||||||||||| |||||||  |||| || |||||| |||||||||||||    
T  24356214 ttttgagtgcctttttcaagtattgatgcattcttctttatcataaatgtaaagtagaatatgttgaattgggagtcgtgaaagtagtattaattagagt 24356115  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||        |||||||||||||||||||||| |||||||    
T  24356114 tataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatg 24356070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 7213592 - 7213433
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||| ||||  ||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||| || ||||||    
T  7213592 agagagaaaaatgattttgagtgcctttatcaaatattggtgcattcttctttattataaatgtaaagtggaatatattgaattgagagttgtgaaagta 7213493  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
     ||||||||||||||||||          ||||||||| |||||||||||| ||||||||    
T  7213492 gtattaattagagttataaaagggaaaaagtaattaatattgtattgaaaagtgaaatga 7213433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 28844171 - 28843958
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggt---acattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatatt 116  Q
    |||| ||||||| ||||||||||||||||||||   | ||||||||||||||||||||||||||| ||||||||||||| ||||| || |||||| ||||    
T  28844171 aaataattttgaatgtctttggcaagtattggtgtaatattcttctttatcataaatgtaaagtataatatattgaattgagagtggtgaaagtattatt 28844072  T
Q  117 aattagagttataatt--nnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagtt 214  Q
     |||||||||||||||            |||||||||||||||||||||||||||| || || |||     |||| || ||||||| |||||||||| ||    
T  28844071 tattagagttataattagaaaaaaaaaaaattaatgttgtattgaaaactgaaatggatcaaaattcttaggacaatatttttttacaaatgactcaatt 28843972  T
Q  215 attacgggacggag 228  Q
    ||||||||| ||||    
T  28843971 attacgggagggag 28843958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 9724995 - 9724879
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||||||||||||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | |  || ||||||    
T  9724995 agagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt--ggggggtgaaagta 9724898  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  9724897 gtattaattagagttataa 9724879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 37529063 - 37529218
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| ||||| |||||||||||||||  ||||||||||  ||| |||||||||||||||||||||||||||| ||||||||   ||| || ||||||||    
T  37529063 agagaaaaatggttttgagtgtctttgttaagtattggtctatttttctttatcataaatgtaaagtagaataaattgaattggaagtggtgaaagtaat 37529162  T
Q  114 attaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    |||||||||||||||||||        ||||||||| |||||||| ||| ||||||    
T  37529163 attaattagagttataattgaaaaaaagtaattaatattgtattggaaagtgaaat 37529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 6972529 - 6972756
Alignment:
Q  12 agagagagaaa-tgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||||||| || ||||||||| | ||  ||| |||| || ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  6972529 agagagagaaaatggttttgagtgcccttatcaactatttgtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtaaaagt 6972628  T
Q  111 aatattaattagagttataatt----nnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatg 206  Q
    |||||||||||| |||||||||            ||||||||| |||||||||||| ||||||| |||||  || | | |||| || |||||   |||||    
T  6972629 aatattaattagtgttataattgaagaaaaaaaagtaattaatattgtattgaaaagtgaaatggataaatttttctgggacaatattttttagcaaatg 6972728  T
Q  207 actcagttattacgggacggagcgagta 234  Q
     ||| ||||||||||||||||| |||||    
T  6972729 gctcggttattacgggacggagggagta 6972756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 2048375 - 2048289
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  2048375 tattggtgcattcttgtttatcataaatgcaaagtagaatatattgaattgagagtagtgaaaataatattaattagagttataatt 2048289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 4283009 - 4283129
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| || | ||  ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  4283009 agagagaaaaatggttttgaatgcccttatcaagtattggtgcattcctctttatcataaatgtaaaatagaatatattgaattgagagtggtaaaagta 4283108  T
Q  112 atattaattagagttataatt 132  Q
     ||| |||||||||| |||||    
T  4283109 gtataaattagagttgtaatt 4283129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 43182381 - 43182223
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| |||||||||||||||| ||| ||||||| ||||||||||||| ||||||||  |||| |||||||||||||   ||| || ||| || |||||||    
T  43182381 aaataattttgagtgtctttgtcaaatattggtgcattcttctttattataaatgt--agtataatatattgaattggaagtggtgaaaatagtattaat 43182284  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
    || ||||||||||        |||||||||||||||||||||| ||||||| || ||||||    
T  43182283 taaagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatggatcaagatt 43182223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 31348628 - 31348404
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||| | ||  ||| ||||||| ||||||| ||||||||||||| | ||||||||||||||||||| || | || ||||||    
T  31348628 agagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagtagaatatattgaattaggaatggtgaaagta 31348529  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactca 211  Q
     |||||||||| |||||||||        ||||||||| |||||||||||| |||||||  | ||  || |   |||| || ||||||  ||||| ||||    
T  31348528 gtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaattgaaatgggtcaatttttctaggacaatatttttttgcaaatggctca 31348429  T
Q  212 gttattacgggacggagcgagtata 236  Q
    ||||||| ||||||||| |||||||    
T  31348428 gttattatgggacggagggagtata 31348404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 233
Target Start/End: Complemental strand, 13222185 - 13221965
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||| | ||  ||| |||||||  |||||||||||||||||||| |||||| |||||||||||||   ||| || ||||||    
T  13222185 agagagaaaaatgggtttgagtgcccttatcaactattggtgtattcttctttatcataaatgcaaagtaaaatatattgaattggaagtggtgaaagta 13222086  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactca 211  Q
    ||||||||||| |||||||||         |||||||| |||||||||||| |||||||   ||   ||| || |||| || ||||||  ||||||||||    
T  13222085 atattaattagtgttataattgaaaaaaaataattaatattgtattgaaaagtgaaatggtcaatttttatgg-gacaatatttttttgcaaatgactca 13221987  T
Q  212 gttattacgggacggagcgagt 233  Q
    ||||||| ||||||||| ||||    
T  13221986 gttattatgggacggagggagt 13221965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 39166725 - 39166806
Alignment:
Q  51 gtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||| |||||||||||||||||||| |||||||||||||  ||||||| |||||||||| ||||| ||| ||||||    
T  39166725 gtacattcttttttatcataaatgtaaagtataatatattgaattgggagtagtgaaagtaatataaattaaagtcataatt 39166806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 928543 - 928646
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    |||||||| ||||  ||| ||||||| ||||||||||||||||||||| ||| |||||||||||  ||| ||||| || |||||| |||||||||| |||    
T  928543 tttgagtgcctttatcaactattggtgcattcttctttatcataaatgcaaaatagaatatatt--attgagagtggtgaaagtagtattaattagtgtt 928640  T
Q  127 ataatt 132  Q
    ||||||    
T  928641 ataatt 928646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 14384298 - 14384388
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||||| || ||||||||||||||||||| ||||||||||||| |||||    |||||| ||||||||||| ||||||||    
T  14384298 caagtattggtgcattcatcattatcataaatgtaaagtataatatattgaattgagagtgaagaaagtagtattaattagaattataatt 14384388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 19515968 - 19515878
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| |||| ||| |||||||||||| |||||| |||||||||||||   |||| | |||||| ||||||||||||||||||||    
T  19515968 caagtattggttcatttttcattatcataaatgcaaagtaaaatatattgaattgtaagtaatgaaagtagtattaattagagttataatt 19515878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 24451891 - 24451781
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||||||||    | ||||||| |||||||||||||||||||||||  ||||||||||||| |||   ||  || ||||||||||||||    
T  24451891 aaatggttttgagtgtctttattgaatattggttcattcttctttatcataaatgta--gtagaatatattgtattggaaggggtgaaagtaatattaat 24451794  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  24451793 tagagttataatt 24451781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 8550632 - 8550752
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| || || |||| |||||  ||| |||||||| || |||||| | |||||||||||| |||||  |||||||||||||||||||  | ||||||    
T  8550632 agagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattctccattatcataaatgcaaagtctaatatattgaattaagagtgatgaaagta 8550731  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||| ||||||||||    
T  8550732 gtattaattatagttataatt 8550752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 31592666 - 31592547
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||| ||||||||| | ||||||||| | |||||||  |||||||||||  |||||||||||||||||||| |||||  | ||| ||    
T  31592666 agagagaaaaatagtttcgagtgtctt-gtcaagtattgctgcattctttcttatcataaatacaaagtagaatatattgaattgagagtgatgaaaata 31592568  T
Q  112 atattaattagagttataatt 132  Q
    |||||||||| ||||||||||    
T  31592567 atattaattaaagttataatt 31592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 3200012 - 3199895
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| ||||||||||| |||  || |||| || ||   || ||||||||||||| |||||| |||||||||||||  |||| || ||||||    
T  3200012 agagagaaaaatggttttgagtgtcattgttaactatttgtgca---ttttttatcataaatgcaaagtataatatattgaattgggagtggtgaaagta 3199916  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||||||||||||    
T  3199915 gtattaattagagttataatt 3199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 43427118 - 43427196
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||||| ||| ||||||||||||||||  ||||  | |||||| |||||||||| |||||||||    
T  43427118 cattcttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaagtagtattaattagtgttataatt 43427196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 314536 - 314451
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagta 105  Q
    ||||| ||||||||| | ||  ||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  314536 aaatggttttgagtgcccttatcaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattgaaagtagta 314451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 33880214 - 33880157
Alignment:
Q  73 tgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||||||||||||  |||| || |||||||||||||||||||||||||    
T  33880214 tgtaaagtagaatatattgaattgggagtggtgaaagtaatattaattagagttataa 33880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 39095717 - 39095628
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| |||||||| | |||||||||||| ||||| ||||||||||||||   |||  | |||||||||||||||| ||||||||||    
T  39095717 aagtattgatacattctccattatcataaatgcaaagtggaatatattgaattgtcagtgatgaaagtaatattaattaaagttataatt 39095628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 44424253 - 44424373
Alignment:
Q  12 agagagagaaa-tgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||||||| || |||||| |||||| | ||||||||| | |||| ||  |||||||||||| ||||| |||||||||||||| ||| |  | |||||    
T  44424253 agagagagaaaatggttttgaatgtctt-gtcaagtattgatgcattttttattatcataaatgcaaagttgaatatattgaattgagaatgatgaaagt 44424351  T
Q  111 aatattaattagagttataatt 132  Q
    | ||||||||||||||||||||    
T  44424352 agtattaattagagttataatt 44424373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 4794682 - 4794570
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| |||||||||||  ||| ||| ||||| | |||| ||  |||||||||||| ||||| |||||||||||||| | |||  | |||||| |||||||    
T  4794682 aaataattttgagtgttcttgtcaaatattgatgcattttttattatcataaatgcaaagtggaatatattgaattgaaagtgatgaaagtagtattaat 4794583  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  4794582 tagagttataatt 4794570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 18181203 - 18181323
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||| ||||  ||||  | |||||||| |||||| |  ||||||||||| |||||||||||| |||||||  || || | ||||||    
T  18181203 agagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgcaaagtagaatattttgaattgggaataatgaaagta 18181302  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||||||||||||    
T  18181303 gtattaattagagttataatt 18181323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 38280186 - 38280258
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaa 84  Q
    ||||||| ||||| ||||||||| ||||   || ||||||| |||||||||||||||||||||||||||||||    
T  38280186 agagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaatgtaaagtagaa 38280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 10069626 - 10069733
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaa 162  Q
    |||||||||||| ||||| |||||||||||||| |||||  | |||||| |||||||||||||||| |||        ||||||||| ||| ||||||||    
T  10069626 ttatcataaatgcaaagtcgaatatattgaattgagagtgatgaaagtattattaattagagttatcattgtaaaaaagtaattaatattgcattgaaaa 10069725  T
Q  163 ctgaaatg 170  Q
     |||||||    
T  10069726 gtgaaatg 10069733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 25604476 - 25604328
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||||||||||||  | |||||||||| |||||||  |||||||||||| ||| ||||||||||||||||  ||||| |  |  ||    
T  25604476 agagagaaaaatagttttgagtgtctt--gtaagtattggtgcattctttcttatcataaatgcaaattagaatatattgaattgggagtaatgtagata 25604379  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaa 162  Q
    |||||||||||| ||||| ||        ||||||||||||| ||||||||    
T  25604378 atattaattagaattatagttggaaaaaagtaattaatgttggattgaaaa 25604328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 28108396 - 28108483
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||| ||||||||| |||||||||||||| ||| |  | |||||| ||||||||||||||||||    
T  28108396 aagtattggtgcattctccactatcatacatgtaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataa 28108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 228
Target Start/End: Original strand, 38282477 - 38282631
Alignment:
Q  76 aaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa--ttnnnnnnnngtaattaatgttgtattgaaaactgaaatgaat 173  Q
    ||||||||||||||| ||||  |||| || |||||||||||||||||| ||||||  ||         |||||||||||||||| |||| ||| ||||||    
T  38282477 aaagtagaatatattaaattgggagtggtgaaagtaatattaattagaattataaaattgtaaaaaaataattaatgttgtattaaaaagtgagatgaat 38282576  T
Q  174 aaagattacggtgacagtaattttttataaatgactcagttattacgggacggag 228  Q
     ||||||   | |||| || |||||||||||||  |||||||||| |||||||||    
T  38282577 caagattcttgggacaatatttttttataaatggttcagttattatgggacggag 38282631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 41436188 - 41436037
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| ||||| ||||| ||||  |||||||| |  |||||||  ||||||||||| ||||| |||||||||||||| ||| |  | |||||| |||||||    
T  41436188 aaataattttaagtgtttttgttaagtattgatgtattcttcactatcataaatgcaaagtggaatatattgaattgagaatgatgaaagtagtattaat 41436089  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    |||||||||||          ||||||||| |||||||||||| ||||||||    
T  41436088 tagagttataaaagggaaaaagtaattaatattgtattgaaaagtgaaatga 41436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 2427435 - 2427369
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||| || |||||| ||||||||    
T  2427435 cattcttctttgtcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaatt 2427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 3487453 - 3487391
Alignment:
Q  70 aaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| |||||||||||||||||||| |||||  | |||||||||||||||||||| ||||||    
T  3487453 aaatgcaaagtagaatatattgaattgagagtgatgaaagtaatattaattagagtaataatt 3487391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 6213842 - 6213960
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| |||||||||| |||||  | | ||||||||| | ||||   | |||||||||||| ||||||||||||||| ||||||||||  | |||||| |    
T  6213842 agagaaaaatgattttaagtgttctcgtcaagtattgcttcatttaccattatcataaatgcaaagtagaatatattcaattaagagtgatgaaagtagt 6213941  T
Q  114 attaattagagttataatt 132  Q
    |||||||| ||||| ||||    
T  6213942 attaattaaagttaaaatt 6213960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 6723884 - 6723969
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| ||||| || ||||||||||| ||||||||||| |||||||||  ||||  | ||||| |||||||||||||||||||||    
T  6723884 tattggtgcattcctcattatcataaatataaagtagaatttattgaatt-ggagtgatgaaagttatattaattagagttataatt 6723969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 14890426 - 14890369
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaa 77  Q
    ||||| ||||||||||||||  |||||||| || ||||||||||||||||||||||||    
T  14890426 aaatggttttgagtgtctttatcaagtattagtgcattcttctttatcataaatgtaa 14890369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 734002 - 734121
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||||||||| | | |||| ||| ||||||| |||||    |||||||||||||| |||| |||||||||| ||  ||||  | ||||||    
T  734002 agagagaaaaatgattttgaatatttttgtcaaatattggtgcattcactattatcataaatgtatagtaaaatatattgagttgggagtgatgaaagta 734101  T
Q  112 atattaattagagttataatt 132  Q
    ||||| |||||||||||||||    
T  734102 atatt-attagagttataatt 734121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 11726764 - 11726832
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| || ||||||||||||||||||||||||||  | |||||| ||||||||| | ||||||||    
T  11726764 tatcataattgcaaagtagaatatattgaattaagagtgatgaaagtagtattaattaaaattataatt 11726832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 23685062 - 23684958
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    |||| ||||| ||||  ||||||| || |||||| |  ||||||||||| |||||  ||||||||||||| |||||  | |||||| |||||||||||||    
T  23685062 ttttaagtgtttttgttaagtattagtgcattctccactatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagt 23684963  T
Q  126 tataa 130  Q
    |||||    
T  23684962 tataa 23684958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 6685706 - 6685773
Alignment:
Q  65 atcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||||||||||||||||   ||| || |||||  ||||||||||| ||||||||    
T  6685706 atcataaatgtaaagtagaatatattgaattggaagtggtgaaagttgtattaattagaattataatt 6685773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 28301520 - 28301433
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||| |||||  ||||||||||||| |||||  | |||||| ||||||||||||||||||    
T  28301520 aagtattggtctattctccactatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataa 28301433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 36748265 - 36748182
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||| ||||  ||||||||  ||||  ||||||||||| | || ||||||||||||||| ||||||| |||||||||||||    
T  36748265 agagagaaaaatagttttgagttcctttttcaagtattggtgcgttattctttatcataaatttaaagtaaaatatattgaatt 36748182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 37247905 - 37247992
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||| |||||  ||||||||||||| || ||  | |||||||||||||||||||||||||    
T  37247905 aagtattggtctattctccactatcataaatgcaaagtgaaatatattgaattgagtgtgatgaaagtaatattaattagagttataa 37247992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 44534504 - 44534591
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||||| |  ||||||||||| ||||| ||||||||||||||   ||  || ||| || ||||||||||||||||||    
T  44534504 aagtattggtacattctccactatcataaatgcaaagtggaatatattgaattggaagctgtgaaattagtattaattagagttataa 44534591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 13375212 - 13375298
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagt-agaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||| |||||| |  ||||||||||||||||| | ||||||||||||| ||| |  | ||| |||||||||||||||||||||    
T  13375212 gtattggtgcattctccactatcataaatgtaaagtgaaaatatattgaattgagaatgatgaaaataatattaattagagttataa 13375298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 26273842 - 26273756
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| ||||||  || |||||||||||| ||||||||||||||||||||  ||||  | |||||| ||||||||| | ||||||||    
T  26273842 tattgatacatttatcattatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaattaaatttataatt 26273756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 40710693 - 40710605
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| ||||  |||||||||| |||| ||| |||| || |||||||| |||||||| ||| ||||||| |||||||||||| |||||    
T  40710693 agagagaaaaatagttttgagtgt-tttgtcaaatattcgtgcattcttccttatcatacatgcaaagtagcatatattgaattgagagt 40710605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 44024784 - 44024715
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| ||||||||||||||||| |||||| |  | ||| || ||||||||| ||||||||||    
T  44024784 ttatcataaatgcaaagtagaatatattgagttaagaatgatgaaaatagtattaattatagttataatt 44024715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 3100522 - 3100402
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||||||| ||||   |||  |||||||| | |||||| |  ||||||||||| ||||| ||||||||| ||||   ||| || |    
T  3100522 gaaggagagagaaaaatgattttaagtgatcttgttaagtattgctgcattctccactatcataaatgcaaagtggaatatattaaattggaagttgtga 3100423  T
Q  107 aagtaatattaattagagtta 127  Q
    ||||| |||||||||||||||    
T  3100422 aagtagtattaattagagtta 3100402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 29937955 - 29938015
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattaga 123  Q
    |||||||||||  |||||| ||||||||||||| ||| |  ||||||||||||||||||||    
T  29937955 ttatcataaatacaaagtaaaatatattgaattgagaatgataaaagtaatattaattaga 29938015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 38872920 - 38873029
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||||| ||  ||| ||||| | ||||| |||||||||||||| ||||||  |||||||||||||  |||| || |||||| |||   |    
T  38872920 aaatggttttgagtgtccttatcaactattgatgcattcctctttatcataaatataaagt--aatatattgaattgggagtggtgaaagtagtatcggt 38873017  T
Q  120 tagagttataat 131  Q
    ||||||||||||    
T  38873018 tagagttataat 38873029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 39807322 - 39807242
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcata-----aatgtaaagtagaatatattgaatt 95  Q
    ||||| ||||||||| |||||  |||||||||| ||||||||||||| |||     ||||||| |||||||||||||||||    
T  39807322 aaatggttttgagtgcctttgtgaagtattggtgcattcttctttataataaatataatgtaatgtagaatatattgaatt 39807242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 43077770 - 43077834
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||||  ||||||||||||| | | |  | |||||||||||||||||||||||||    
T  43077770 tcataaatgtaaagtgaaatatattgaattgaaaatgatgaaagtaatattaattagagttataa 43077834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 10818707 - 10818620
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| ||||||    ||||||||||| |||||  ||| |||||||||| ||||  | ||||| |||||||||||||||||||    
T  10818707 aagtattggtgcattctctagtatcataaatgcaaagtgaaatgtattgaattaggagtgatgaaagtgatattaattagagttataa 10818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 15859388 - 15859491
Alignment:
Q  68 ataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaa 167  Q
    ||||||| |||||  ||||||||||||||  ||| || |||||||| ||||||||||||||||          ||||||||| |||||||||||| ||||    
T  15859388 ataaatgcaaagtgaaatatattgaattagaagttgtgaaagtaatgttaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaa 15859487  T
Q  168 atga 171  Q
    ||||    
T  15859488 atga 15859491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 24775829 - 24775916
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  |||||||||||||||||  ||||||||||||||| | |  | |||||| ||||||| ||||||||||    
T  24775829 aagtattggtgtattctccactatcataaatgtaaagtgaaatatattgaattaaaaatgatgaaagtagtattaatcagagttataa 24775916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 28527050 - 28526963
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||| || ||||||||  || |||| ||||||||| || |||||||||||   ||| || |||||||||||||||| ||||||||    
T  28527050 aagtattcgtgcattcttcactaccatatatgtaaagtggactatattgaattggaagttgtgaaagtaatattaattatagttataa 28526963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 31546060 - 31546167
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaac 163  Q
    ||||| ||||| ||||| ||||||||| | ||||||||  | |||||| |||| |||||||||||||||        ||||||||| ||||||| ||||     
T  31546060 tatcacaaatgcaaagtggaatatatttagttaagagtgatgaaagtagtattgattagagttataattgaaaaaaagtaattaatattgtatttaaaag 31546159  T
Q  164 tgaaatga 171  Q
    ||||||||    
T  31546160 tgaaatga 31546167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 5212000 - 5212066
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| |||||||||||||| | ||| || |||||| ||||||||| | ||||||    
T  5212000 tatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattaaatttataa 5212066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 8031858 - 8031740
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||  ||||  |||  |||||||| |  ||||| | |||||||||||| |||||  |||||||||||||  || |  ||||||||    
T  8031858 agagagaaaaatgattttatgtgttcttgttaagtattgatgtattctccattatcataaatgcaaagttaaatatattgaattgtgaatgataaaagta 8031759  T
Q  112 atattaattagagttataa 130  Q
     ||||||||| ||||||||    
T  8031758 gtattaattaaagttataa 8031740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 16864978 - 16865044
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||  |||||||||||||  || |  | ||||| |||||||||||||||||||||    
T  16864978 tcataaatgtaaagtgaaatatattgaattgtgaatgatgaaagtgatattaattagagttataatt 16865044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 30757610 - 30757676
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| | ||||||||||||||  || |  | |||||| ||||||||||||||||||    
T  30757610 tatcataaatgtaaattggaatatattgaattgggaatgatgaaagtagtattaattagagttataa 30757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 33755379 - 33755293
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaa 93  Q
    |||| ||||||| |||||||||| |||||  |||  ||||||||||  |||||| | ||||||||||| ||| | ||||||||||||    
T  33755379 gaaggagagagaaaaatgattttaagtgttattgttaagtattggtctattcttttctatcataaatgcaaaatggaatatattgaa 33755293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 44736766 - 44736716
Alignment:
Q  82 gaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||  |||||  |||||||| ||||||||||||||||||||    
T  44736766 gaatatattgaatcgagagtgataaaagtagtattaattagagttataatt 44736716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 2756740 - 2756671
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||||||||||||| ||||   |||  |  || || ||||||||||||||||||||    
T  2756740 ttatcataaatgtaaagtagaatatattaaattggaagtgatgtaaatagtattaattagagttataatt 2756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 7420918 - 7420987
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| |||||| |||||||| |||  ||||||   ||| |||||||||||| ||||||||||    
T  7420918 ttatcataaatgaaaagtaaaatatatttaatagagagtaacgaaattaatattaattaaagttataatt 7420987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 435120 - 435184
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    |||||||||||||||||  ||||||||||||| ||| |  | |||||| ||||||||| ||||||    
T  435120 tatcataaatgtaaagtgaaatatattgaattgagaatgatgaaagtagtattaattaaagttat 435184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 6075551 - 6075495
Alignment:
Q  76 aaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||| ||||  ||||  | |||||| ||||||||||||||||||||    
T  6075551 aaagtagaatatattaaattgggagtgatgaaagtagtattaattagagttataatt 6075495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 12949963 - 12950026
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaa 84  Q
    |||| |||||||||||||| | |||||||||||  |||| | ||||||||||||| |||||||||    
T  12949963 aaataattttgagtgtctt-gtcaagtattggtgaattcctttttatcataaatgcaaagtagaa 12950026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 33602269 - 33602339
Alignment:
Q  65 atcataaatgtaaagtagaatata---ttgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||| ||||| |||||||   ||||||| |||||  | ||||||| |||||||||||||||||||    
T  33602269 atcataaatgcaaagtggaatataatattgaattgagagtgatgaaagtaacattaattagagttataatt 33602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 43056441 - 43056409
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||||||||||||||| |||||||||||||    
T  43056441 ttatcataaatgtaaagtataatatattgaatt 43056409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 2849372 - 2849204
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  2849372 agagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagta 2849273  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
     ||||||||||| ||||||||        |||||||||||||||||||||| ||||||| || ||||||    
T  2849272 gtattaattagaattataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatggatcaagatt 2849204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 18731542 - 18731337
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||  ||||||||| |  |||||||||||||||||||||||||||||||||||||||||   ||| || ||||   |||||||||||||    
T  18731542 ttttgagtgtctttatcaagtattgatgaattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaag---tattaattagagt 18731446  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacg 225  Q
    |||||||        | |||||||||||||||| ||||||||||| || |||||||| | |||| || ||||||| ||| ||||||||||| | ||||||    
T  18731445 tataattggaaaaaagcaattaatgttgtattggaaactgaaatggatcaagattactgggacaatatttttttacaaacgactcagttatcatgggacg 18731346  T
Q  226 gagcgagta 234  Q
    ||| |||||    
T  18731345 gagggagta 18731337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 27337867 - 27338020
Alignment:
Q  16 agagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatat 115  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  27337867 agagaaatagttttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagtataatatattgaattgggagtggtaaaagtaatat 27337966  T
Q  116 taattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||| ||||||||||         ||||||||||||||||||||| |||||||    
T  27337967 taattaaagttataattggaaaaaa-taattaatgttgtattgaaaagtgaaatg 27338020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 32776105 - 32775980
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||| ||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || |    
T  32776105 gaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtga 32776006  T
Q  107 aagtaatattaattagagttataatt 132  Q
    ||||| ||||| ||||||||||||||    
T  32776005 aagtagtattatttagagttataatt 32775980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 5068335 - 5068511
Alignment:
Q  59 ttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattg 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||        ||||||| | |||||||     
T  5068335 ttctttatcataaatgtaaagtagaatatattgaattaagagtggtgaaagtaatattaattagagttataattggaaaaaagtaattagtattgtatta 5068434  T
Q  159 aaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacggagcgagtat 235  Q
    |||| |||||||| | || |||   | |||| ||  |||||| |||||||||| |||||| |||||| || ||||||    
T  5068435 aaaagtgaaatgagtcaatattcttgggacaatatatttttacaaatgactcacttattatgggacgaagggagtat 5068511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 30659470 - 30659628
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||| ||||| ||| |||| || | |||||||||||||||||| |||||||||||||||||||||   ||| || ||||||    
T  30659470 agagagaaaaatagttttgagtgcctttgtcaaatatttgtgcgttcttctttatcataaatataaagtagaatatattgaatttgaagtggtgaaagta 30659569  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
     ||||||||||||||||||||        |||||||||||||||||||||| |||||||    
T  30659570 gtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 30659628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 37264430 - 37264272
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| ||||||||| | ||| ||||||||| | ||||  ||||||||||||||| ||||||||||||||||||||  |||| || ||||||    
T  37264430 agagagaaaaatggttttgagtgcccttgtcaagtattgatgcattgctctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagta 37264331  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
     ||||||||||||||||||||        ||||||||| |||||||||||| |||||||    
T  37264330 gtattaattagagttataattaggaaaaagtaattaatattgtattgaaaagtgaaatg 37264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 36070214 - 36070003
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||||||||| ||| ||||||| |||| |||||||||||||| ||||||||||||||| |||||| |||||  | |||||| |||||||    
T  36070214 aaatggttttgagtgtctttgtcaaatattggtgcattattctttatcataaacgtaaagtagaatatactgaattgagagtgatgaaagtagtattaat 36070115  T
Q  120 tagagttataatt---nnnnnnnngtaattaatgttgtattg-aaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagtta 215  Q
    ||||| |||||||           |||||||||||||||| | |||||||||||| || ||| || | |||||| || ||||||| ||||  ||||||||    
T  36070114 tagagctataattgaagaaaaaaagtaattaatgttgtatggaaaaactgaaatggatcaaggttcctgtgacaatatttttttacaaatagctcagtta 36070015  T
Q  216 ttacgggacgga 227  Q
    |||||| |||||    
T  36070014 ttacggaacgga 36070003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 10355733 - 10355845
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||||| ||  ||| ||||||| ||||  ||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||    
T  10355733 aaatggttttgagtgtccttatcaactattggtgcatttctctttatcataaatgcaaagtagaatatattgaattgagaatggtaaaagtaatattaat 10355832  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  10355833 tagagttataatt 10355845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 24288540 - 24288420
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||| ||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||| | ||  || || |||    
T  24288540 agagagataaatagttttgagtgcctttttcaagtatttgtgcattcttctttatcataaatgtaaagtagaatatattgaattgaaagctgtgaatgta 24288441  T
Q  112 atattaattagagttataatt 132  Q
    |||||||||||||||||||||    
T  24288440 atattaattagagttataatt 24288420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 34064331 - 34064212
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||||||| |  |||||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||  | ||||||    
T  34064331 agagagaaaaatagttttgagtgtctt-gttaagtattggtgcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagta 34064233  T
Q  112 atattaattagagttataatt 132  Q
    |||||||||||||||||||||    
T  34064232 atattaattagagttataatt 34064212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 39343675 - 39343819
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    |||||||||  |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||  |||| || ||| || |||||||||||||    
T  39343675 ttttgagtgcatttgtcaagtatttgtgtattcttctttatcataaatgtaaagtagaatatattgaatttggagtggtgaaaatagtattaattagagt 39343774  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||        ||||||||| |||||||||||| |||||||    
T  39343775 tataattgaaaaagggtaattaatattgtattgaaaagtgaaatg 39343819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 43007997 - 43007862
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||| |||||||| || |||| ||||||||||||||| |||| |||||||||||||||| ||||| || ||| ||||||||||||||||    
T  43007997 ttttgagtgtctttgtcaagtatttgtgcatttttctttatcataaatttaaattagaatatattgaattgagagtggtgaaaataatattaattagagt 43007898  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaa 161  Q
    ||| |||        ||||||||| |||||||||||    
T  43007897 tattattggaaagaagtaattaatattgtattgaaa 43007862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 38589851 - 38589731
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| || | ||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||    
T  38589851 agagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagta 38589752  T
Q  112 atattaattagagttataatt 132  Q
     |||||||||| |||||||||    
T  38589751 gtattaattagtgttataatt 38589731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 37496418 - 37496612
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    ||||||| || |||||||  ||||||||||||||||||||||||||||||||| |||||  | |||||| ||||||||| ||||||||||        ||    
T  37496418 aagtatttgtgcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtagtattaattaaagttataattggaaaaaagt 37496517  T
Q  143 aattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacggagcgagtataa 237  Q
    |||||||||||| ||||||| |||||||  | ||  ||   | || | || ||||||  ||||||||||||||||| ||||||||| ||||||||    
T  37496518 aattaatgttgtgttgaaaagtgaaatgggtcaatttttttgggataatatttttttgcaaatgactcagttattatgggacggagggagtataa 37496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 3667870 - 3668082
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| |||| ||||||||||||||   |||||||| || |||| ||  ||||||||||||||||||||||||||||||||| |||||  | ||||||||    
T  3667870 agagaaaaataattttgagtgtcttat-caagtattagtgcattatttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaat 3667968  T
Q  114 attaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagt 213  Q
    |||||||||| ||||| ||        ||||||| |||||||||||||| |||||||  | ||  ||     |||| || ||||||| ||||||||||||    
T  3667969 attaattagaattatatttggaaaaaagtaattattgttgtattgaaaagtgaaatgggtcaatttttttaggacaatatttttttacaaatgactcagt 3668068  T
Q  214 tattacgggacgga 227  Q
    |||||||| |||||    
T  3668069 tattacggaacgga 3668082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 45218148 - 45218253
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||    
T  45218148 agagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagta 45218247  T
Q  112 atatta 117  Q
     |||||    
T  45218248 gtatta 45218253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 23111079 - 23111159
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattga 92  Q
    ||||||| |||||||||||| |||||||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  23111079 agagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattga 23111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 28333237 - 28333127
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaa 162  Q
    |||||||||||||||||||||||||||||||||  ||||  | |||||||||||||||||||||||| ||        ||||||| ||||||||||||||    
T  28333237 ttatcataaatgtaaagtagaatatattgaattgggagtgatgaaagtaatattaattagagttatatttggaaaaaagtaattattgttgtattgaaaa 28333138  T
Q  163 ctgaaatgaat 173  Q
     ||||||||||    
T  28333137 gtgaaatgaat 28333127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 30462777 - 30462620
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||||| ||  ||| |||||||||||   ||||||||| |||| || ||||||||||||||||| || ||||||||||||| |||||  | ||| ||    
T  30462777 agagagagagattgtttagagtgtctttgattagtattggtgcattattttttatcataaatgtaaaatataatatattgaattgagagtgatgaaatta 30462678  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
     ||||||||||||||||||||         ||||||||||||||||||||| ||||||    
T  30462677 gtattaattagagttataattgaaaaaaaataattaatgttgtattgaaaattgaaat 30462620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 32972008 - 32972128
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| ||||||||| | ||  ||| ||||||| ||||||| ||| ||||||||| ||||||||||||||||||||  |||| || ||||||    
T  32972008 agagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtcataaatgcaaagtagaatatattgaattgtgagtggtgaaagta 32972107  T
Q  112 atattaattagagttataatt 132  Q
     |||||||||| |||||||||    
T  32972108 ttattaattagtgttataatt 32972128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 6591527 - 6591651
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggc----aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaa 107  Q
    ||||||| |||||||||||||||| |||  |    || |||||||  ||||| | |||||||||||| ||||||||||||||||||||||||||| | ||    
T  6591527 agagagataaatgattttgagtgtttttttccttcaaatattggtcaattctccattatcataaatgcaaagtagaatatattgaattaagagtaatgaa 6591626  T
Q  108 agtaatattaattagagttataatt 132  Q
     ||||||||||||| ||||||||||    
T  6591627 cgtaatattaattatagttataatt 6591651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 37490603 - 37490726
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||||||| ||||| |||   |||||||||| |||||| |  ||||||||||| ||||| |||||||||||||| | |||  |||    
T  37490603 gaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactatcataaatgcaaagtggaatatattgaattgatagtgataa 37490702  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||||||||||||||| ||||||    
T  37490703 aagtaatattaattagaattataa 37490726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 9602936 - 9602858
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| ||||| || |||||| |||||||||| |||||||||    
T  9602936 cattcttttttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataatt 9602858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 9830507 - 9830429
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| ||||| || |||||| |||||||||| |||||||||    
T  9830507 cattcttttttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataatt 9830429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 14648943 - 14649029
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| ||||  || |||||||||||| || ||||||||||||||||| |||||  | |||||||||||||||||||||||||||    
T  14648943 tattggtgcatttctcattatcataaatgcaaggtagaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 14649029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 29997027 - 29997176
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| |||||| |||| |||  || ||||||| ||||||||||||||||||||| |||||| |||||||||| ||  || | || |||||| |||||||    
T  29997027 aaatggttttgaatgtccttgttaattattggtgcattcttctttatcataaatgcaaagtataatatattgagttgggaattgtgaaagtagtattaat 29997126  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    |||  ||||||||        ||||||||| |||||||||||| ||||||    
T  29997127 tagtattataattgaaaaaaggtaattaatattgtattgaaaaatgaaat 29997176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 21412025 - 21412134
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttcttt-atcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||||||||  |||| | |||||||| ||||||||  | ||||||||||| ||||||||||||||||| ||||||||||||| ||| | || |||||    
T  21412025 agagagagaaatagttttcaatgtctttgtcaagtatttatgcattcttcttttatcataaatgtaaagtaaaatatattgaattgaga-tggtgaaagt 21412123  T
Q  111 aatattaatta 121  Q
    | |||||||||    
T  21412124 agtattaatta 21412134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 25778831 - 25778741
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||| |  |||||||||||| |||||| |||||||||||||   |||  | |||||| ||||||||||||||||||||    
T  25778831 caagtattggtacattccttcttatcataaatgcaaagtaaaatatattgaattggaagtgatgaaagtagtattaattagagttataatt 25778741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 38181864 - 38181982
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||| |||||  |||| |||||||||| |||| | |  ||||||||||| ||| ||||||||||||||||   ||| || ||||||    
T  38181864 agagagaaaaatggttttaagtgttcttggtaagtattggtgcattttccactatcataaatgcaaaatagaatatattgaattggaagttgtgaaagta 38181963  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  38181964 gtattaattagagttataa 38181982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 8150075 - 8149915
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||| ||||| |||| ||| |||| || |||| | | ||||||||||   |||||||||||||| ||| ||  |||  | ||||||    
T  8150075 agagagaaaaatggttttaagtgt-tttgtcaaatatttgtgcattttccattatcataaaatcaaagtagaatatatcgaactagtagtgatgaaagta 8149977  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaat 173  Q
    |||||||||||||||||||||        ||||||||| |||||||||||| ||||||||||    
T  8149976 atattaattagagttataattggaaaaaagtaattaatattgtattgaaaaatgaaatgaat 8149915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 6838154 - 6838090
Alignment:
Q  37 tttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    |||| |||| |||||| |||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  6838154 tttgccaaggattggtgcattcttctttatcataaatataaagtaaaatatattgaattgagagt 6838090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 31581464 - 31581592
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| |||||| |  ||||||||||||||| | |||||||||||||| | | |  | |||||| |||||||||||||||||| |        ||    
T  31581464 aagtattggtgcattctccaatatcataaatgtaaaatggaatatattgaattgaaaatgatgaaagtagtattaattagagttataaatggaaaaaagt 31581563  T
Q  143 aattaatgttgtattgaaaactgaaatga 171  Q
    ||||||| |||||||||||| ||||||||    
T  31581564 aattaatattgtattgaaaagtgaaatga 31581592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 47238334 - 47238214
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| ||||||||| | ||  |||  |||||| ||||||||||||||||||||| |||||| || || ||||  | ||||| || ||||||    
T  47238334 agagagaaaaatggttttgagtgcccttatcaacaattggtgcattcttctttatcataaatgcaaagtacaaaatgttgagatgagagtggtgaaagta 47238235  T
Q  112 atattaattagagttataatt 132  Q
     |||||||||| |||||||||    
T  47238234 gtattaattagtgttataatt 47238214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 40590846 - 40590933
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||| | |  ||||||||||  |||||||||||||||||| | ||| || |||||||| ||||||||||||||||||    
T  40590846 aagtattggtgcattttccgctatcataaatacaaagtagaatatattgaaatgagaataataaaagtagtattaattagagttataa 40590933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 29257612 - 29257546
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||  ||||  | |||||||||||||||||||||||||    
T  29257612 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 29257546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 23186167 - 23186251
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||| |||||| |  ||||||||||  ||||||||||||||||||||  ||||  |||||||| | ||||||||||||||||    
T  23186167 tattggtgcattctccactatcataaatacaaagtagaatatattgaatttggagtgataaaagtagtgttaattagagttataa 23186251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 1643359 - 1643442
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    |||||||||| |||||||| | |||||||||| ||||| ||||||||| |||| | ||| |  |||||| ||||||||||||||    
T  1643359 aagtattggtgcattcttcataatcataaatgcaaagtggaatatattaaattgaaagttgggaaagtagtattaattagagtt 1643442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 30463102 - 30463015
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |   |||||||||||||| | |||||||||||||| | | |  | |||||||||||||||||||||||||    
T  30463102 aagtattggtgcattctccacaatcataaatgtaaaatggaatatattgaattgaaaatgatgaaagtaatattaattagagttataa 30463015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 44604463 - 44604585
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||||||| |||||  |||  ||||||||||  ||||| |  ||||||||| | ||||| ||||||||||| || |||||  | |    
T  44604463 gaaggagagagaaaaatgattttaagtgttcttgttaagtattggtttattctccactatcataaa-gcaaagtggaatatattgagttgagagtgatga 44604561  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||| ||||||||||||||||||    
T  44604562 aagtagtattaattagagttataa 44604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 7425899 - 7425985
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||||| |||||| |  ||||||||||| ||||| ||||||||||||||   ||| || |||||| |||||| ||||||||||    
T  7425899 aagtattggtgcattctccactatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtattaactagagttata 7425985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 17266113 - 17265987
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| ||||||||  ||||||||||| |||||  ||||||| |||||  ||||  | ||| ||||||||||||||| |||| ||        ||    
T  17266113 aagtattggtgcattcttcactatcataaatgcaaagtgaaatatatcgaattgggagtgatgaaaataatattaattagagatatatttggaaaaaagt 17266014  T
Q  143 aattaatgttgtattgaaaactgaaat 169  Q
    |||||||||| ||||||||| ||||||    
T  17266013 aattaatgttatattgaaaagtgaaat 17265987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 25940790 - 25940856
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||||||| ||| ||||||||||| |||| |||||  | |||||| |||||||||||||||||    
T  25940790 ttatcataaatgcaaactagaatatattaaatttagagtgatgaaagtagtattaattagagttata 25940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 34963853 - 34963919
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||||||  |||||||| |||| ||| |  | |||||||||||||||||||||||||    
T  34963853 tatcataaatgtaaagtgaaatatatttaattgagaatgatgaaagtaatattaattagagttataa 34963919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 11726847 - 11726787
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattaga 123  Q
    ||||||||||| |||||||||| |||||||||| |||||  || || ||||||||||||||    
T  11726847 ttatcataaatataaagtagaagatattgaattgagagtgatacaaataatattaattaga 11726787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 21387501 - 21387553
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||||||||| |||||| |  ||||||||||||||||| ||||||||||||||    
T  21387501 aagtattggtgcattctccactatcataaatgtaaagtggaatatattgaatt 21387553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 21446553 - 21446433
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||| |||||||||||| ||   || |||| || ||||||| |||||||||||| ||||||| |||||||| || | | | |  ||||||||    
T  21446553 agagagaaaaataattttgagtgtccttattaattattagtgcattcttttttatcataaatataaagtataatatattaaactgaaaatgataaaagta 21446454  T
Q  112 atattaattagagttataatt 132  Q
    |||| ||||||  ||||||||    
T  21446453 atatcaattagtattataatt 21446433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 2842037 - 2842160
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||| | || |||||  ||| ||||||||| | |||||| |  ||||||||||| |||||  ||||||||||||| |||||  | |    
T  2842037 gaaggagagagaaaaatggtgttaagtgttattgtcaagtattgatgcattctccactatcataaatgcaaagtgaaatatattgaatttagagtgatga 2842136  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||| ||||||||| | ||||||    
T  2842137 aagtagtattaattataattataa 2842160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 40023772 - 40023875
Alignment:
Q  67 cataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactga 166  Q
    |||||||| |||||| |||||||||||||| || |  | ||| || ||||||||||||||||||||        ||||||||| |||||||||||| |||    
T  40023772 cataaatgcaaagtaaaatatattgaattatgaatgatgaaattactattaattagagttataatt-aaaaaaagtaattaatattgtattgaaaagtga 40023870  T
Q  167 aatga 171  Q
    |||||    
T  40023871 aatga 40023875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 23703981 - 23703915
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| |  ||||||||||||| | | |  |||||||| ||||||||||||||||||    
T  23703981 tatcataaatgtaaaatgaaatatattgaattgaaaatgataaaagtagtattaattagagttataa 23703915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 30459137 - 30459059
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||| |||||||| ||||||||||| |||||||||||||||| ||| |  | ||| |  ||||||||||| ||||||||    
T  30459137 cattattctttataataaatgtaaaatagaatatattgaattgagaatgctgaaaatgttattaattagaattataatt 30459059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 46288473 - 46288539
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||| |||| ||||| |||||||||||||| | |||  | |||||| ||||||||||||||||||    
T  46288473 tatcattaatgcaaagtggaatatattgaattgaaagttatgaaagtagtattaattagagttataa 46288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 9658954 - 9658866
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| ||||| |||||||||||||  | || ||||||| |||| | | |||| ||||||||||||||||| |||| |||||| ||||    
T  9658954 agagagaaaaatggttttgagtgtcttgtg-aactattggtgcattttcccttatgataaatgtaaagtagaacatatcgaattaggagt 9658866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 19505809 - 19505870
Alignment:
Q  61 ctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattag 122  Q
    ||||||||||||||||||||| || |||||||||||  |||  | ||| |||||||||||||    
T  19505809 ctttatcataaatgtaaagtaaaagatattgaattataagtgatgaaattaatattaattag 19505870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 39171204 - 39171135
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| |||||| |||||||| ||||||||||  ||||| ||  | || ||||||||||||||    
T  39171204 ttatcataaatgcaaagtataatatattaaattaagagtgataaaaatagcaatatttagagttataatt 39171135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 39498740 - 39498671
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||  ||| || |||||||||||||  ||||  | |||||||||||||||||| ||||||||    
T  39498740 ttatcataaattcaaaatataatatattgaattgggagtgatgaaagtaatattaattagaattataatt 39498671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 1101997 - 1102053
Alignment:
Q  76 aaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||| ||||| |||||| | ||| |||||||||||| | ||||||||    
T  1101997 aaagtagaatatatcgaattgagagtaatgaaaataatattaattaaaattataatt 1102053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 11616648 - 11616560
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatata-ttgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||| ||| ||||| ||||||| |||||||  |||| || |||||  ||||||||||||||||||    
T  11616648 aagtattggtgcattctccactatcatatatgcaaagtggaatataattgaattgggagtggtgaaagttgtattaattagagttataa 11616560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 29434624 - 29434688
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||| ||||| ||||||||||||||  || |  | |||||| ||||||||||||||||||    
T  29434624 tcataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttataa 29434688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 34001900 - 34001964
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtta 127  Q
    |||||||||||| ||||| |||||||||||||| || ||  | |||||| ||||||||| |||||    
T  34001900 ttatcataaatgcaaagtggaatatattgaattgagggtgatgaaagtagtattaattacagtta 34001964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 36117724 - 36117660
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| |||||||||||||| | | |  | ||||| |||||||||| ||||||||    
T  36117724 tcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtgatattaattaaagttataa 36117660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 46095462 - 46095518
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    ||||||||||| |||||  ||||||||||||| |||||  |||||||| ||||||||    
T  46095462 tatcataaatgcaaagtgaaatatattgaattgagagtgataaaagtagtattaatt 46095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 49100523 - 49100575
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||||||  ||||| |  ||||||||||||||||| ||||||||||||||    
T  49100523 aagtattggtttattctccactatcataaatgtaaagtggaatatattgaatt 49100575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 6390 - 6549
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||||| ||||||||||||||||| | ||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||    
T  6390 agagagagagatgattttgagtgtcttagtcaagtattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagta 6489  T
Q  112 atattaattagagttataatt-nnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||||||||||||||||         |||||||||||||||||||||| |||||||    
T  6490 atattaattagagttataattgaaaaaaaagtaattaatgttgtattgaaaattgaaatg 6549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 100)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 52382377 - 52382536
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||||| ||||||||||||||||| | ||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||    
T  52382377 agagagagagatgattttgagtgtcttagtcaagtattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagta 52382476  T
Q  112 atattaattagagttataatt-nnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||||||||||||||||         |||||||||||||||||||||| |||||||    
T  52382477 atattaattagagttataattgaaaaaaaagtaattaatgttgtattgaaaattgaaatg 52382536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 36232780 - 36232937
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||   | | || ||||||    
T  36232780 agagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatataaagtagaatatattgaattggaaatggtgaaagta 36232879  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
     ||||||||||||||||||||        |||||||||||| ||||||||||||||||    
T  36232880 gtattaattagagttataattggaaaaaagtaattaatgttttattgaaaactgaaat 36232937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 27209958 - 27210078
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| || |||  |    
T  27209958 agagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatgtaaaggagaatatattgaattgagagtggtgaaaaga 27210057  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||||||||||||    
T  27210058 gtattaattagagttataatt 27210078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 218
Target Start/End: Original strand, 5115816 - 5116023
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||  |||||||||||||||| ||||  || ||||||    
T  5115816 agagagagcattgattttgagtgtctttgacaagtattgatgcattcttctttatcataaatgtaatatagaatatattgaattgagagaggtgaaagta 5115915  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagta-attttttataaatgactc 210  Q
    ||||||||||||| |||||||        |||||| ||||| ||||||||| |||||||||| || ||||  | |||| ||  ||||||| |||||| ||    
T  5115916 atattaattagagctataatttgaaaaaagtaattgatgttatattgaaaagtgaaatgaatcaatattattgggacaatattttttttacaaatgattc 5116015  T
Q  211 agttatta 218  Q
    ||||||||    
T  5116016 agttatta 5116023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 14352675 - 14352525
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||  |||| || ||||||||||||||    
T  14352675 aaatggttttgagtgtctttgtcaagtattggtgcattcttctttatcgtaaatataaagtagaatatattgaattgggagtggtgaaagtaatattaat 14352576  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    || ||||||||||         ||||||||||||||| |||||||||||||    
T  14352575 tacagttataattgagaaaaaataattaatgttgtatagaaaactgaaatg 14352525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 37280990 - 37281090
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  37280990 agagagaaatgattttgagtgtctttgtcaagtattggtgcattcttttttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagtaat 37281089  T
Q  114 a 114  Q
    |    
T  37281090 a 37281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 463
Target Start/End: Original strand, 8571696 - 8571894
Alignment:
Q  265 taccgtatggttggacttgtaccaatcaccaataaggacagtgtaatctccagctggttcagggaaagggactggaattctaggtctactgagtatccta 364  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||||| ||||| || |||  ||| || || |||||||| || ||||| || || |||    
T  8571696 taccgtgtggttggacttgtaccaatctccaatgaggacagtgtaatcaccagcgggatcatcgaagggaacgggaattcttggcctacttagaattcta 8571795  T
Q  365 atgcctccaaaaccaccagctgctttttgaaatgctagagatggaaagtagtaaaagcttccaatttgatccttcacttgaagaatatatgtgaagttc 463  Q
    || ||||||||||||||||| ||||| || ||||| |||||||| || || || || || ||||||||||| || |||||||| || ||||||||||||    
T  8571796 attcctccaaaaccaccagcagctttgtggaatgcaagagatgggaaataatagaaactaccaatttgatcttttacttgaagtatgtatgtgaagttc 8571894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 12267652 - 12267790
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnng 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| || |||||| |||||| |||||||||||||        |    
T  12267652 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaactagagttataattggaaaaaag 12267751  T
Q  142 taattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
    |||||||||| |||||||||| |||||||| | ||||||    
T  12267752 taattaatgtcgtattgaaaagtgaaatgagtcaagatt 12267790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 11425855 - 11426019
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||  |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||   |||||| |    
T  11425855 gaaggagagagaaaaatagttttgagtgtctttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagtagtga 11425954  T
Q  107 aagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    ||||| ||||||||| ||||||||||        ||||||||| |||||||| ||| ||||||||    
T  11425955 aagtagtattaattaaagttataattgaaaaaaagtaattaatattgtattggaaagtgaaatga 11426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 16040194 - 16040035
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||| ||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||| || ||||||    
T  16040194 agagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagta 16040095  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    |||||| ||||||||||||||        ||||||||| |||||||| ||| ||||||||    
T  16040094 atattatttagagttataattgaaaaaaagtaattaatattgtattggaaagtgaaatga 16040035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 234
Target Start/End: Complemental strand, 50334009 - 50333830
Alignment:
Q  55 attcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgt 154  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||| ||||||||||||||||||||        |||||||||||| |    
T  50334009 attcttctttatcataaatgtaaagtagagtatattgaattgagagtggtgaaagtattattaattagagttataattaaaaaaaagtaattaatgttat 50333910  T
Q  155 attgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacggagcgagta 234  Q
    |||| ||| ||||||| || ||||||   | |||| || ||||||  ||||||||||||||||| ||| ||||| |||||    
T  50333909 attggaaagtgaaatggatcaagattcttgcgacaatatttttttgcaaatgactcagttattatgggtcggagggagta 50333830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 705348 - 705457
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||||||||||| |||||||   ||||||| || ||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  705348 aaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatgtaaagtataatatattgaattgagagtggtaaaagtaatattaat 705447  T
Q  120 tagagttata 129  Q
    ||||||||||    
T  705448 tagagttata 705457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 2886246 - 2886065
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttg 153  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| || |||||| |||||||||| |||||||||        ||||||||| |||    
T  2886246 cattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattg 2886147  T
Q  154 tattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacggagcgagtat 235  Q
    ||||||||| ||||||  || ||  || | | |||| || ||||||  ||||||||||||||||| ||||||||| ||||||    
T  2886146 tattgaaaagtgaaattgatcaatttttctgggacaatatttttttgcaaatgactcagttattatgggacggagggagtat 2886065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 31798535 - 31798378
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| | ||| ||||||||| | ||  ||| ||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  31798535 agagagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatatattgaattgagagtagtgaaagta 31798436  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    ||||||||||| |||||||||        ||||||||| || ||||||||| ||||||    
T  31798435 atattaattagtgttataattggaaaaaagtaattaatattatattgaaaagtgaaat 31798378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 37495944 - 37495847
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||||||||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||    
T  37495944 agagagaaatgattttgaatgtctttatcaagtattggtgcattcttctttattataaatgtaaagtagaatatattgaattgggagtagtgaaagta 37495847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 47293590 - 47293750
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||  | || || || |||    
T  47293590 agagagaggaatgattttgagtgtttttgtcaagtattggtgcattcttctttatcataaatataaattagaatatattgaatt-ggcgtggtgaatgta 47293688  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaat 173  Q
     ||||||||||| |||| |||        |||||||||||||| ||||||| ||||||||||    
T  47293689 gtattaattagaattatcattgaaaaaaagtaattaatgttgttttgaaaagtgaaatgaat 47293750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 37925237 - 37925387
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||||||| ||||   ||  ||| ||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||| || ||||||    
T  37925237 agagagaaaaatgatttttagtgctcttatcaattattggtgcatttttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagta 37925336  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaa 162  Q
    ||||||||||| |||||||||        ||||||||| ||||||||||||    
T  37925337 atattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaa 37925387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 4466145 - 4466265
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||  |||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||| || ||||||    
T  4466145 agagagaaaaatgggtttgagtacctttgttaagtattggtccattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagta 4466244  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||||||||||||    
T  4466245 gtattaattagagttataatt 4466265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 26583845 - 26583687
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| |||||||| ||||  ||| ||||||| ||||||||||||||||||||| ||| ||||||||||||||||  ||||  | ||| ||    
T  26583845 agagagaaaaatgagtttgagtgcctttatcaactattggtgcattcttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaaata 26583746  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
     |||||||||| |||||||||        ||||||||| |||||||||||| |||||||    
T  26583745 ttattaattagtgttataattggaataaagtaattaatattgtattgaaaagtgaaatg 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 28706614 - 28706735
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgt-aaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||| ||||| ||||||||| ||||| ||||||||| | |||| ||||||||||||||||| ||| |||||||||||||||||  |||  | |||||    
T  28706614 agagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaatgtaaaaatagaatatattgaattagcagtgatgaaagt 28706713  T
Q  111 aatattaattagagttataatt 132  Q
     |||||||||||||||||||||    
T  28706714 tatattaattagagttataatt 28706735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 27932824 - 27932944
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||||| ||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| || || ||     
T  27932824 agagagaaaaatgcgtttgagtgtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaggtt 27932923  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||  ||||||||    
T  27932924 gtattaattagtattataatt 27932944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 29756133 - 29756253
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||| | ||  ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||  |||| || ||||||    
T  29756133 agagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagta 29756232  T
Q  112 atattaattagagttataatt 132  Q
     |||||||||| |||||||||    
T  29756233 gtattaattagtgttataatt 29756253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 29225402 - 29225556
Alignment:
Q  15 gagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaata 114  Q
    |||| ||||||||||||||| |||||  |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||   ||| || |||||| ||    
T  29225402 gagaaaaatgattttgagtgcctttgttaagtattggtgcattcttttttatcataaatggaaagtagaatatattgaattggaagtggtgaaagtagta 29225501  T
Q  115 ttaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    || ||| |||||||||||        ||||||||| |||||||| ||| |||||||    
T  29225502 tt-atttgagttataattggaaaaaagtaattaatattgtattggaaaatgaaatg 29225556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 37541104 - 37541321
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| |||||||  ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||   ||| || ||||||    
T  37541104 agagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataaatgtaaagtagaatatattgaattggaagtggtgaaagta 37541203  T
Q  112 --atattaattagagttataatt--nnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatga 207  Q
      ||||||||||  |||||||||          ||||||||| |||||||||||| |||||| ||| ||  || | | |||| || ||||||  ||||||    
T  37541204 gtatattaattaatgttataattggaaaaagtagtaattaatattgtattgaaaagtgaaataaatcaatctttctgagacaatatttttttgcaaatga 37541303  T
Q  208 ctcagttattacgggacg 225  Q
    ||||||||||| ||||||    
T  37541304 ctcagttattatgggacg 37541321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 40061931 - 40061765
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||||||| | |||  ||  ||||||||| |||||| ||| |||||||||||| ||| |||||||||||||||| |||||  | |    
T  40061931 gaagaagagagaaaaatgattttaaatgttcttatcaagtattgttacatttttcattatcataaatgcaaattagaatatattgaattgagagtgatga 40061832  T
Q  107 aagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaat 173  Q
    ||||||||||||||||| ||||||||        ||||||||| ||| |||||||| | ||||||||    
T  40061831 aagtaatattaattagaattataatttaaaaaaagtaattaatattgcattgaaaaataaaatgaat 40061765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 21304811 - 21304912
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||| ||||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||||||| || ||| || || |||||| |||    
T  21304811 ttttgagtgtctttgtcaagtattgatgcatttttctttatcataaatataaagtataatatattgaattaagagtggtgaaaatattaataattaaagt 21304910  T
Q  126 ta 127  Q
    ||    
T  21304911 ta 21304912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 29225854 - 29225654
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    |||||||||||| | ||||||||||| ||||| |  |||||||||||| ||||||||||||||||||||  ||||  | |||||| ||||||||||||||    
T  29225854 tttgagtgtctt-gtcaagtattggtgcattcattcttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaattagagtt 29225756  T
Q  127 ataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacgg 226  Q
    ||||||        ||||||| | |||||||||||| |||||||  | ||  ||   | |||| || ||||||| ||||||||||||||||| ||| |||    
T  29225755 ataattggaaaaaagtaattattattgtattgaaaagtgaaatgggtcaatctttttgggacaatatttttttacaaatgactcagttattatggggcgg 29225656  T
Q  227 ag 228  Q
    ||    
T  29225655 ag 29225654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 2219439 - 2219557
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||||  |||||||||||||||||||   ||  |||| | |||||||||||||||||||||||||||| |||||||||||||   ||| || || |||    
T  2219439 agagagaataatgattttgagtgtctttataaaagattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattggaagttgtgaacgta 2219538  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  2219539 gtattaattagagttataa 2219557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 17342950 - 17342788
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| |||| || ||||| |||| ||||| ||||  |||||||||| |||||| | |||||||||||  |||||  ||||||||||||| |||||  |||    
T  17342950 gaaggagagggaaaaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataa 17342851  T
Q  107 aagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    ||||| |||||||||||||||||||         ||||||||| |||||||||||| ||||||    
T  17342850 aagtagtattaattagagttataatgaaaaaatagtaattaatattgtattgaaaagtgaaat 17342788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 20988533 - 20988631
Alignment:
Q  72 atgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    ||||||||||||||||||||||||  |||| || ||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||    
T  20988533 atgtaaagtagaatatattgaattgggagtggtgaaaataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatg 20988631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 26924111 - 26924213
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| |||||||| | ||  ||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||| || ||||||    
T  26924111 agagagaaaaatgagtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagtataatatattgaattgagagtggtgaaagta 26924210  T
Q  112 ata 114  Q
    |||    
T  26924211 ata 26924213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 24131391 - 24131548
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| || | ||  ||| ||| ||| ||||||||||||||||||||| |||||| |||||||||||||  |||| || ||||||    
T  24131391 agagagaaaaatggttttgaatgcccttatcaactataggtgcattcttctttatcataaatgcaaagtataatatattgaattgggagtggtgaaagta 24131490  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
     |||||||||| |||||||||        ||||||||| ||| |||||||| ||||||    
T  24131491 gtattaattagtgttataattggaaaaaagtaattaatattgcattgaaaagtgaaat 24131548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 46363401 - 46363522
Alignment:
Q  12 agagagagaaatgattttgagtgt-ctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    |||||||||||||  ||||||||  ||||  ||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||| ||  ||||    
T  46363401 agagagagaaatgtgtttgagtgcactttatcaactattggtgcattcttctttatcataaatgcaaagtaaaatatattgaattgagagtggtggaagt 46363500  T
Q  111 aatattaattagagttataatt 132  Q
    | |||||||||  |||||||||    
T  46363501 agtattaattattgttataatt 46363522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 5359319 - 5359415
Alignment:
Q  73 tgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    |||||||||||||||||||| || ||||| || |||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||    
T  5359319 tgtaaagtagaatatattgatttgagagtggtgaaagtaatattaattagaattataatt-gaaaaaagtaattaatgttgtattgaaaactgaaatg 5359415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 33149390 - 33149274
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||||| ||   || |||||||  |||||||||||||||||||| |||||||||||||||||||| |||||  | ||||||    
T  33149390 agagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagta 33149291  T
Q  112 atattaattagagttat 128  Q
     |||||||||| |||||    
T  33149290 gtattaattagtgttat 33149274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 40754403 - 40754511
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaag-tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||||||||| ||||||||| | ||  |||  ||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||| || |||||    
T  40754403 agagagagaaatggttttgagtgcccttatcaacctattggtgcattcttctttatcataaatgcaaagtagaatatattaaattgagagttgtgaaagt 40754502  T
Q  111 aatattaat 119  Q
    | |||||||    
T  40754503 agtattaat 40754511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 46273269 - 46273157
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| ||||||| ||| |||| ||||||||| | |||||||||||||| ||||||||||||||||| |||| |||| ||| | || ||| ||||||||||    
T  46273269 aaataattttgaatgtttttgtcaagtattgatgcattcttctttatcttaaatgtaaagtagaatgtattaaattcagaatggtgaaaataatattaat 46273170  T
Q  120 tagagttataatt 132  Q
    || | ||||||||    
T  46273169 taaaattataatt 46273157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 50926864 - 50926788
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatata 88  Q
    ||||||| ||||| |||||| ||  |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  50926864 agagagaaaaatggttttgaatgcatttgtcaagtattggtgcattcttctttatcataaatgtaaagtagaatata 50926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 51749169 - 51749292
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| || ||||||| |||||  |||  ||||||||||  ||||| | |||||||||||| ||||| ||||||||||||||  ||||  | |    
T  51749169 gaaggagagagaaaactgattttaagtgttcttgttaagtattggtttattctccattatcataaatgcaaagtggaatatattgaattgggagtgatga 51749268  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||||||||||||||||||||||    
T  51749269 aagtaatattaattagagttataa 51749292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 50086084 - 50086011
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || || ||| || |||||||||||||||    
T  50086084 cattcttctttatcataaatgtaaagtagaatatattgaatttggtgtggtgaaaatagtattaattagagtta 50086011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 10587612 - 10587692
Alignment:
Q  52 tacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||| |||||||||||| ||| |||||||||||||||| |||||  | |||||| |||||||||| |||||||||    
T  10587612 tacattcttcattatcataaatgcaaaatagaatatattgaattgagagtgatgaaagtagtattaattagtgttataatt 10587692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 45305961 - 45305850
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| |||||||||||||| | ||||||||  | |||||||| |||||||||||| |||||||||||||||||||| ||| |  | ||| |||| |||||    
T  45305961 aaataattttgagtgtctt-gtcaagtatttatgcattcttcattatcataaatgcaaagtagaatatattgaattgagattgatgaaaataattttaat 45305863  T
Q  120 tagagttataatt 132  Q
    || ||||||||||    
T  45305862 taaagttataatt 45305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 51049624 - 51049517
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| |||||||  ||||| || || ||||||| |||||||||||||||||||| |||||||||||||  |||| || ||||||    
T  51049624 agagagaaaaatggttttgaatgtctttatcaagt-ttagtgcattcttttttatcataaatgtaaagtataatatattgaattgggagttgtgaaagta 51049526  T
Q  112 atattaatt 120  Q
     ||||||||    
T  51049525 gtattaatt 51049517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 43895912 - 43895805
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaac 163  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||| ||||||||||||||||| |||          ||||||||| ||||||||||||     
T  43895912 tatcataaatgcaaagttgaatatattgaattgagagtaataaaaataatattaattagagttgtaaagaggaaaaagtaattaatattgtattgaaaag 43895813  T
Q  164 tgaaatga 171  Q
    ||||||||    
T  43895812 tgaaatga 43895805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 48242633 - 48242740
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaac 163  Q
    ||||||||||||||||| |||||||||||||| ||| |  |||||||||||||||||| ||||||||          ||||||||| ||||||||||||     
T  48242633 tatcataaatgtaaagtggaatatattgaattgagaatgataaaagtaatattaattaaagttataaaaagaaaaaagtaattaatattgtattgaaaag 48242732  T
Q  164 tgaaatga 171  Q
    ||||||||    
T  48242733 tgaaatga 48242740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 44580583 - 44580513
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||| ||||||||||||||| ||||| |||| || || |||||||||||||| |||||||||    
T  44580583 tttatcataaatgcaaagtagaatatattaaattaggagtggtgaatgtaatattaattagtgttataatt 44580513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 16451687 - 16451590
Alignment:
Q  73 tgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    ||||||||  ||||||||||||| ||||| || |||||| ||||||||| ||||||||||        |||||||||||||||||||||| |||||||    
T  16451687 tgtaaagttaaatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 16451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 16460840 - 16460743
Alignment:
Q  73 tgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    ||||||||  ||||||||||||| ||||| || |||||| ||||||||| ||||||||||        |||||||||||||||||||||| |||||||    
T  16460840 tgtaaagttaaatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 16460743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 2571465 - 2571323
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||| |  |||||||||| |||| ||  ||||| |||||| |||||||||||||||||||| |||||  | |||||| |||||| ||||||    
T  2571465 ttttgagtgtctt-gttaagtattggtgcattatttcttatcctaaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaactagagt 2571367  T
Q  126 tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
    ||| |||        ||||||| |||||||||||||| |||||||    
T  2571366 tat-atttggaaaaagtaattattgttgtattgaaaagtgaaatg 2571323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 13500724 - 13500840
Alignment:
Q  16 agagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatat 115  Q
    |||||||||||||| ||||  ||||  | |||||||| ||||||||  ||||||||||| ||||| ||| ||||||||||  ||||  | |||||| |||    
T  13500724 agagaaatgattttaagtgcttttgttatgtattggtgcattcttcactatcataaatgcaaagtggaaaatattgaattgggagtgctgaaagtagtat 13500823  T
Q  116 taattagagttataatt 132  Q
    |||||||| ||||||||    
T  13500824 taattagaattataatt 13500840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 18186217 - 18186317
Alignment:
Q  32 gtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataat 131  Q
    |||||||||  ||||||||   ||||||| |||||||||||| ||| ||| |||||| ||||||  |||| || |||||| |||||||||||||||||||    
T  18186217 gtgtctttgttaagtattgacgcattcttttttatcataaatataatgtaaaatatactgaattgggagtggtgaaagtagtattaattagagttataat 18186316  T
Q  132 t 132  Q
    |    
T  18186317 t 18186317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 167560 - 167489
Alignment:
Q  53 acattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagag 124  Q
    ||||||||  ||||||||||||||||  |||| |||||||||| |||||| |||||| ||||||||||||||    
T  167560 acattctttattatcataaatgtaaatgagaagatattgaattgagagtaataaaagaaatattaattagag 167489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 3718870 - 3718957
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||| || ||||  || ||||||||||||||||||| ||||||||||||| |||||  | || ||| |||||||||||||||||    
T  3718870 caagtatttgtgcatttatcattatcataaatgtaaagtataatatattgaattgagagtgatgaaggtagtattaattagagttata 3718957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 7785296 - 7785383
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||| | |||||| |  |||||||||||||||||  ||||||||||||| ||||   |||||||| ||||||||||||||||||    
T  7785296 aagtattgatgcattctccactatcataaatgtaaagtgaaatatattgaattgagagcgataaaagtagtattaattagagttataa 7785383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 25983650 - 25983737
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| ||||| | ||||||||||||| ||| |||||||| ||||||| |||||  | ||| |||||||||||| ||||||||    
T  25983650 aagtattggtgcattcatttttatcataaatgcaaaatagaatatgttgaatttagagtgatgaaattaatattaattaaagttataa 25983737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 27831963 - 27831804
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||| |||| | ||| ||||||||||| |||||  | |||||||||||| ||||| ||| ||||||||||  ||||  | ||||||    
T  27831963 agagagaaaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatgcaaagtggaagatattgaattgggagtgatgaaagta 27831864  T
Q  112 atattaattagagt-tataattnnnnnnnngtaattaatgttgtattgaaaactgaaatg 170  Q
     ||||||||||||| |||||||        ||||||||||||| |||||||| |||||||    
T  27831863 gtattaattagagtgtataattggaaaaaggtaattaatgttgcattgaaaagtgaaatg 27831804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 31634300 - 31634359
Alignment:
Q  28 ttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatat 87  Q
    |||||||||||||  |||||||| | ||||| ||||||||||||||||||||||||||||    
T  31634300 ttgagtgtctttgttaagtattgatgcattcctctttatcataaatgtaaagtagaatat 31634359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 50267460 - 50267547
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| | ||||||||||||||||||  |||||||||||||  || |  | |||||||||||||||||| ||||||    
T  50267460 aagtattggtgcattctccattatcataaatgtaaagtgaaatatattgaattgggaatgatgaaagtaatattaattagaattataa 50267547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 52146699 - 52146766
Alignment:
Q  65 atcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||| |||||||||||| | ||||| ||||| || |||||| ||||||||||||||||||||    
T  52146699 atcataaatgcaaagtagaatatgtcgaattgagagttgtgaaagtagtattaattagagttataatt 52146766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 25842685 - 25842596
Alignment:
Q  43 aagtattggtacattcttct-ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||| |  | |||||| | ||||||| ||||||||||    
T  25842685 aagtattggtacatt-ttctattatcataaatgtaaagtagaatatattgcattgagaatgatgaaagtagtgttaattatagttataatt 25842596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 30903233 - 30903338
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||| |  ||||||| || |||| | | |||||||||||| ||||||||||||||||||  | ||||  | ||| ||||||||||||||||    
T  30903233 ttttgagtgtctt-gttaagtatttgtgcattttccattatcataaatgcaaagtagaatatattgaaacaggagtgatgaaaataatattaattagagt 30903331  T
Q  126 tataatt 132  Q
    |||||||    
T  30903332 tataatt 30903338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 19349036 - 19349105
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| ||| |||||||||||||||| |||||  | |||||| |||||||||| |||||||||    
T  19349036 ttatcataaatgcaaaatagaatatattgaattgagagttttgaaagtagtattaattagggttataatt 19349105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 32587881 - 32587764
Alignment:
Q  13 gagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaa 112  Q
    |||||| |||| ||||| ||||| ||||  |||||||| | |||| | | |||||||||||| |||||  ||||||||||||| |||||  | ||| ||     
T  32587881 gagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataaatgcaaagtgaaatatattgaattgagagtgatgaaattat 32587782  T
Q  113 tattaattagagttataa 130  Q
    ||||||||||||||||||    
T  32587781 tattaattagagttataa 32587764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 46496134 - 46496017
Alignment:
Q  13 gagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaa 112  Q
    |||||| ||||| ||||||||||  |||  ||| |||| |  ||||| | |||||||||||| ||||| ||||||||||||||| | ||  | ||||||     
T  46496134 gagagaaaaatggttttgagtgttcttgttaaggattgatgtattctccattatcataaatgcaaagtggaatatattgaattaggcgtgatgaaagtag 46496035  T
Q  113 tattaattagagttataa 130  Q
    ||||||||||||||||||    
T  46496034 tattaattagagttataa 46496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 4659484 - 4659428
Alignment:
Q  76 aaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||| ||||| ||||    
T  4659484 aaagtagaatatattgaattaggagtgataaaagtaatattaattatagttaaaatt 4659428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 16956658 - 16956582
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatatt 90  Q
    ||||| |||||  |||||||||||||   ||||||| || ||||||| |||||||||||| ||||||||||||||||    
T  16956658 agagaaaaatgggtttgagtgtctttattaagtatttgtgcattcttatttatcataaatataaagtagaatatatt 16956582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 21304449 - 21304385
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    ||||||||||| |||||  |||||||||||||||||||  | |||||||||||||||| ||||||    
T  21304449 tatcataaatgcaaagtgaaatatattgaattaagagtgatgaaagtaatattaattacagttat 21304385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 27142948 - 27142996
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaat 94  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  27142948 tattgatacattcttctttatgataaatgtaaagtaaaatatattgaat 27142996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 34877132 - 34877200
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataat 131  Q
    |||||||||||| ||||| ||||||||||||||  ||||  | ||| ||||||||||||||||||||||    
T  34877132 ttatcataaatgcaaagttgaatatattgaattgtgagtgatgaaaataatattaattagagttataat 34877200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 45889273 - 45889357
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||  ||||| | |||||||||||| ||||| ||||||||||||||| || |  | |||||| ||||||||||||||||||    
T  45889273 tattggtctattctccattatcataaatgcaaagtggaatatattgaattatgaatgatgaaagtagtattaattagagttataa 45889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 5442426 - 5442339
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||| || |||||| |  ||||||||||| ||||| ||||||||||||||   ||| || |||||||||||||||| ||||||||    
T  5442426 aagtattagtgcattctccactatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattatagttataa 5442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 7075441 - 7075514
Alignment:
Q  62 tttatcataaatgtaaagtagaatata---ttgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||| |||||||||||   |||||||  |||| || |||||| ||||||||||||||||||||    
T  7075441 tttatcataaatgtagagtagaatatagttttgaattcggagttgtgaaagtagtattaattagagttataatt 7075514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 8327803 - 8327716
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||| ||| | |||||||||||||| |||||  | |||||| ||||||||||||||||||    
T  8327803 aagtattggtctattctcccctatcataaatgcaaaatggaatatattgaattgagagtgatgaaagtagtattaattagagttataa 8327716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 36326196 - 36326259
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgt 75  Q
    |||||||  |||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  36326196 agagagaacaatggttttgagtgtctttgtcaaatattggtgcattcttgtttatcataaatgt 36326259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 52432434 - 52432311
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||||||| ||||   |||  |||||||| | |||||||   || ||||||||||||||  |||||||||||||   ||| || |    
T  52432434 gaagaagagagaaaaatgattttaagtgctcttgttaagtattgatgcattctttactaccataaatgtaaagtgaaatatattgaattgtaagttgtga 52432335  T
Q  107 aagtaatattaattagagttataa 130  Q
    |||||| |||||||||||||||||    
T  52432334 aagtaacattaattagagttataa 52432311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 26040738 - 26040638
Alignment:
Q  35 tctttggcaagtattggtacattcttctttatcataaatgtaaag---tagaatatattgaattaagagtagtaaaagtaatattaattagagttataat 131  Q
    |||||| ||||| ||| | ||||||||||||||||||||||||||   ||||||||||||| ||   ||| ||  ||| | |||||||||||||||||||    
T  26040738 tctttgtcaagttttgatgcattcttctttatcataaatgtaaagtactagaatatattgacttggaagtggtggaagcagtattaattagagttataat 26040639  T
Q  132 t 132  Q
    |    
T  26040638 t 26040638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 48391822 - 48391744
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| | |||| |||||||||||  |||||||||||||| ||||  | |||||||||||||||||  ||||||||    
T  48391822 cattcttcatcatcacaaatgtaaagtgaaatatattgaattatgagtgatgaaagtaatattaattaggattataatt 48391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 49494206 - 49494272
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||||| |||||||||||||||  | |  | |||||||||||||||| ||||||||    
T  49494206 tatcataaatgtaaagtggaatatattgaattagaaatgatgaaagtaatattaattaaagttataa 49494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 2246319 - 2246388
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||||||| || ||||||| |||||  | |||||| |||||| |||| ||||||||    
T  2246319 ttatcataaatgtaaagtagaagatgttgaattgagagtgatgaaagtagtattaactagaattataatt 2246388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 12691990 - 12691906
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    |||||||| |||||||||||||||||||||||| ||  |   ||| ||||||| |||||||| | |||||||| ||||||||||||    
T  12691990 aagtattgttacattcttctttatcataaatgtcaaaca-tgtattttgaattgagagtagtgacagtaatataaattagagttat 12691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 20986588 - 20986629
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatca 68  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  20986588 tttgagtgtctttgtcaagtattggtgcattcttctttatca 20986629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 46536405 - 46536340
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    ||||||||||  ||||| ||||||||| ||||||||||  | |||||| |||||||||||||||||    
T  46536405 tatcataaatacaaagtggaatatattaaattaagagtgatgaaagtagtattaattagagttata 46536340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 5503503 - 5503435
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaata 114  Q
    ||||||| |||||||||||||||| |||  |||||| ||||||||||||| |||||  | |||||||||    
T  5503503 tattggtgcattcttctttatcattaattcaaagtataatatattgaattgagagtgatgaaagtaata 5503435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 25819338 - 25819425
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagag 100  Q
    ||||||| |||| ||||||||||| |||| ||  ||||||| ||||| || |||||||||||| ||||||||| ||||| |||| ||||    
T  25819338 agagagaaaaataattttgagtgt-tttgtcatttattggtgcattcctccttatcataaatgcaaagtagaaaatattaaattgagag 25819425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 42926249 - 42926133
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| |||||||||| ||||| ||||  |||||| ||| |||||| |  ||||||||||| ||| |  ||||||||||||| |||  | | ||| ||||    
T  42926249 agagaaaaatgattttaagtgtttttgttaagtatcggtgcattctccactatcataaatgcaaaatgaaatatattgaattcagaacaatgaaattaat 42926150  T
Q  114 attaattagagttataa 130  Q
    |||||||||| ||||||    
T  42926149 attaattagaattataa 42926133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 52830400 - 52830488
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||| ||||||| |||| ||||||||||  ||||  |||||||||| |||| | |  ||||||||||||||||| ||||||||| ||||    
T  52830400 gaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcataaatgtaaagtggaatatattcaatt 52830488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 141802 - 141743
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattag 122  Q
    ||||||||||||||||  |||| |||||||||| ||| || |||||| ||||||||||||    
T  141802 ttatcataaatgtaaatgagaagatattgaattgagaataataaaagcaatattaattag 141743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 9590620 - 9590553
Alignment:
Q  21 aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatata 88  Q
    |||| |||| |||| ||||| |||||||| || |||| || |||||||||||| ||||||||||||||    
T  9590620 aatggttttaagtgcctttgtcaagtatttgtgcattattatttatcataaatataaagtagaatata 9590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 28277060 - 28277147
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  |||||||||||||||||  ||||||||||||| | | |  | |||||  ||||||||||||||||||    
T  28277060 aagtattggtgcattctccagtatcataaatgtaaagtgaaatatattgaattgaaaatgatgaaagtggtattaattagagttataa 28277147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 28839425 - 28839338
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||  ||||  | |||||| ||||||||| ||||||||    
T  28839425 aagtattggtctattctccactatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattatagttataa 28839338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 40988359 - 40988272
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||  ||||| | |||| ||||||  ||||||||||||||| |||  |||||  | |||||||||||||||| ||||||||||    
T  40988359 gtattggtgtattctccattataataaattcaaagtagaatatattaaatcgagagtcatgaaagtaatattaattaaagttataatt 40988272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 34813983 - 34813917
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    |||||||||||| |||||||||||||||||||| ||| |  | |||||| |||| |||||| |||||    
T  34813983 ttatcataaatgcaaagtagaatatattgaattgagaatgatgaaagtagtattcattagaattata 34813917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 38664466 - 38664400
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||| | ||||||||||||||| || |  | |||||| ||||||||||||||||||    
T  38664466 tatcataaatgcaaaattgaatatattgaattaggaatgatgaaagtagtattaattagagttataa 38664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 40019802 - 40019756
Alignment:
Q  86 atattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||| |||||  | |||||||||||||||||||||||||||    
T  40019802 atattgaattcagagtgatgaaagtaatattaattagagttataatt 40019756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 46880480 - 46880415
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||||| ||||||||| |||| ||| |  | |||||||||||| ||||||||||||    
T  46880480 tatcataaatgtaaagttgaatatattaaattgaga-tgatgaaagtaatattagttagagttataa 46880415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 47792224 - 47792262
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttcttt 64  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  47792224 ttttgagtgtctttggcaaatattggtgcattcttcttt 47792262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 50086153 - 50086107
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattc 58  Q
    ||||||| ||||||||||| ||||||||| ||||||||||| |||||    
T  50086153 agagagaaaaatgattttgtgtgtctttgtcaagtattggtgcattc 50086107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 25869769 - 25869721
Alignment:
Q  43 aagtattggtacattcttct-ttatcataaatgtaaagtagaatatattg 91  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  25869769 aagtattgatacatt-ttctattatcataaatgtaaagtagaatatattg 25869721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 39420703 - 39420581
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttcttt---atcataaatgtaaagtagaatatattgaattaagagtagtaaaa 108  Q
    ||||||| |||| |||||||||||||| | ||||||||||| |||| || |||   || ||||||| |||||| || || ||||||| ||| |  | |||    
T  39420703 agagagaaaaataattttgagtgtctt-gtcaagtattggtgcattgtttttttttattataaatgcaaagtaaaacatgttgaattgagaattatgaaa 39420605  T
Q  109 gtaatattaattagagttataatt 132  Q
    ||| ||||||||||| ||||||||    
T  39420604 gtagtattaattagatttataatt 39420581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 26040778 - 26040734
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttcttt 64  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||    
T  26040778 aaatggttttgagtgtttttgtcaagtattggtgcattcttcttt 26040734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 352451 - 352571
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  352451 agagagaaaaataattttgagtgtctttgttaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagta 352550  T
Q  112 atattaattagagttataatt 132  Q
    ||||||| |||||||||||||    
T  352551 atattaaatagagttataatt 352571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 35998115 - 35998225
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| || |||||| |||||||    
T  35998115 aaataattttgagtgtctttatcaagtattggtacattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtagtattaat 35998214  T
Q  120 tagagttataa 130  Q
    |||||||||||    
T  35998215 tagagttataa 35998225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 39052906 - 39053009
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||    
T  39052906 tttgagtgtctttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagagtt 39053005  T
Q  127 ataa 130  Q
    ||||    
T  39053006 ataa 39053009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 44633259 - 44633105
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| | ||| || |||||| |||||||||||||    
T  44633259 ttttgagtgtctttgtcaagtattggtgcattcttctttatgataaatgtaaagtagaa-atattgaattgaaagtggtgaaagtagtattaattagagt 44633161  T
Q  126 tataatt-nnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
    |||||||         |||||||||||||||||||||| |||||||| | ||||||    
T  44633160 tataattggaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaagatt 44633105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 55360355 - 55360458
Alignment:
Q  29 tgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||  | |||||||||||||||||||||||    
T  55360355 tgagtgtctttgtcaagtattggcgcattcttctttatcataaatgtaaagtacaatatattgaattgagagtgatgaaagtaatattaattagagttat 55360454  T
Q  129 aatt 132  Q
    ||||    
T  55360455 aatt 55360458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 42051654 - 42051870
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||   ||| || ||| ||||| ||||    
T  42051654 aaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagtagaatataatgaattggaagtggtgaaaataataataat 42051753  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagta--attttttataaatgactcagttatt 217  Q
    |||| ||||||||        ||||||||| |||||||||||| | |||||  | |||||| | | || | ||   ||||||| ||||| ||||||||||    
T  42051754 tagaattataattgaaaaaaagtaattaatattgtattgaaaattaaaatgggttaagattcctgggataatatttttttttacaaatggctcagttatt 42051853  T
Q  218 acgggacggagcgagta 234  Q
    ||||||||||| |||||    
T  42051854 acgggacggagggagta 42051870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 28279950 - 28279786
Alignment:
Q  16 agagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatat 115  Q
    ||||||||  |||||||||||||||  |||||||||| |||| ||||||||||||||| |||||||||||||||| ||||   || ||| ||| || |||    
T  28279950 agagaaatagttttgagtgtctttgttaagtattggtgcatttttctttatcataaatataaagtagaatatatttaattggaagcagtgaaaatagtat 28279851  T
Q  116 taattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagatt 180  Q
    |||||||||||||||||        |||||||||||||||||||||| |||||||| | ||||||    
T  28279850 taattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaagatt 28279786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 280 - 478
Target Start/End: Original strand, 28940695 - 28940893
Alignment:
Q  280 cttgtaccaatcaccaataaggacagtgtaatctccagctggttcagggaaagggactggaattctaggtctactgagtatcctaatgcctccaaaacca 379  Q
    ||||||||||||||||||||| |  ||||||||   |||||||||||||||||| || ||||| || ||||| || || ||  | |||  ||||||||||    
T  28940695 cttgtaccaatcaccaataagaaatgtgtaatcattagctggttcagggaaaggaacaggaatccttggtctgctaaggattttgatggatccaaaacca 28940794  T
Q  380 ccagctgctttttgaaatgctagagatggaaagtagtaaaagcttccaatttgatccttcacttgaagaatatatgtgaagttcctccctggtgggatg 478  Q
    |||||||| || ||||| || ||||||||||| ||| | ||||||||||||||||| || ||||||||  | |||||||||||| |||| || ||||||    
T  28940795 ccagctgccttgtgaaaagcaagagatggaaaatagaagaagcttccaatttgatctttgacttgaagtgtgtatgtgaagttcttcccaggagggatg 28940893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 32949853 - 32949959
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    ||||||||||||||  ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||    
T  32949853 ttttgagtgtctttatcaactattggtgcatttttctttatcataaatgtaaagtagaatatattgaattgagagtagtgaaaataatattaattagtgt 32949952  T
Q  126 tataatt 132  Q
     ||||||    
T  32949953 aataatt 32949959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 29550764 - 29550875
Alignment:
Q  59 ttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattg 158  Q
    |||||||||||||||||||||||||||||||||||||  |||| || |||||| ||||||||||||||||||||        ||||||||||||||||||    
T  29550764 ttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgaaaaaaggtaattaatgttgtattg 29550863  T
Q  159 aaaactgaaatg 170  Q
    |||| |||||||    
T  29550864 aaaagtgaaatg 29550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 38320028 - 38319869
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||| | ||  ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||  | ||||||    
T  38320028 agagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagta 38319929  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
     |||||||||| |||||||||        ||||||||| |||||||||||| ||||||||    
T  38319928 gtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatga 38319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 10099729 - 10099835
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagt 125  Q
    |||||||||| |||   |||||||||| |||| ||||||||||||||| |||||||||||||||||||||  |||| || |||||| |||||||||||||    
T  10099729 ttttgagtgtattttttaagtattggtgcatttttctttatcataaatttaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagt 10099828  T
Q  126 tataatt 132  Q
    |||||||    
T  10099829 tataatt 10099835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 34790942 - 34791060
Alignment:
Q  13 gagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaa-gtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||| |||||||||||||||  |||  |||||||| || ||||||||||||||||||| ||||| ||||||||||||||||| |||||  |||| |||    
T  34790942 gagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaaagtaaaagtagaatatattgaattgagagtgataaatgta 34791041  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  34791042 gtattaattagagttataa 34791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 48400621 - 48400734
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||||||| | ||  |||  ||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||     
T  48400621 agagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaagtg 48400720  T
Q  112 atattaattagagt 125  Q
    ||||||||||||||    
T  48400721 atattaattagagt 48400734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 22872403 - 22872498
Alignment:
Q  37 tttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||| ||||||||||| |||||| | |||||||||||| ||||| |||||||||||||| |||||  | |||||||||||||||||||||||||||    
T  22872403 tttgtcaagtattggtgcattctccattatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 22872498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 3505823 - 3505719
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    ||||||||||||||  || ||||| | |||| || |||||||||||||||||||||||||||||||||| ||| |||| ||||||  |||||||||||||    
T  3505823 tttgagtgtctttgttaactattgatgcattttt-tttatcataaatgtaaagtagaatatattgaattgagattagtgaaagtatgattaattagagtt 3505725  T
Q  127 ataatt 132  Q
    ||||||    
T  3505724 ataatt 3505719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 35029152 - 35029063
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| ||||  ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  35029152 agagagaaaaatagtttcgagtgtctttgtcaagtattagtacattcttctttatcataaatgtaaagtagaataaattaaattaggagt 35029063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 25149569 - 25149421
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttcttt-atcataaatgtaaagtagaatatattgaattaagagtagtaaaagt 110  Q
    ||||||| ||||  ||||||||| ||||   |||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||   ||| || |||||    
T  25149569 agagagaaaaatagttttgagtgccttttttaagtattggtgcattcctcttttatcataaatgtaaagtggaatatattgaattggaagttgtgaaagt 25149470  T
Q  111 aatattaattagagttataattnnnnnnnngtaattaatgttgtattga 159  Q
    | ||||||||||||||||||||        |||||||||||||||||||    
T  25149469 agtattaattagagttataattggaaaaaagtaattaatgttgtattga 25149421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 28330911 - 28330791
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||| | ||  ||| ||||||| ||||||||||||||||||||| |||| ||| |||||||||||  |||| || ||||||    
T  28330911 agagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatgcaaagcagattatattgaattgggagtggtgaaagta 28330812  T
Q  112 atattaattagagttataatt 132  Q
    ||||||||||| |||||||||    
T  28330811 atattaattagtgttataatt 28330791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 36047132 - 36047308
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt-nnnnnnnngtaattaatgtt 152  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||||||  |||||| ||         ||||||||| ||    
T  36047132 cattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttatagttggaaaaaaagtaattaatatt 36047231  T
Q  153 gtattgaaaactgaaatgaataaagattacggtgacagtaatttt-ttataaatgactcagttattacgggacggag 228  Q
    |||||||||| |||||||| | ||  || | | |||| || |||| ||  ||||||||||||||||| |||||||||    
T  36047232 gtattgaaaagtgaaatgagtcaatttttctgagacaatatttttcttgcaaatgactcagttattatgggacggag 36047308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 37787074 - 37786958
Alignment:
Q  16 agagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatat 115  Q
    |||||||||| ||||||||| |||| |||||| || | |||||||||||| |||||||||||| ||||||||||| |||| | ||| || ||| ||||||    
T  37787074 agagaaatgagtttgagtgtgtttgtcaagtagtgatgcattcttctttaccataaatgtaaaatagaatatattaaattgaaagtggtgaaaataatat 37786975  T
Q  116 taattagagttataatt 132  Q
    |||||| | ||||||||    
T  37786974 taattaaaattataatt 37786958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 38160142 - 38160262
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||| |||||||||| ||| ||||| | |||||| | |||||||||||  |||||  ||||||||||||| |||||  ||||||||    
T  38160142 agagagaaaaattgttttaagtgtctttgtcaaatattgatgcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagta 38160241  T
Q  112 atattaattagagttataatt 132  Q
    |||||||||||||||||||||    
T  38160242 atattaattagagttataatt 38160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 42132888 - 42132781
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttg 153  Q
    ||||||||||||||||||||| ||||||||||||||||||||   ||| || ||||||||||||||||| |||||||||        ||||||||| |||    
T  42132888 cattcttctttatcataaatgcaaagtagaatatattgaattggaagtggtgaaagtaatattaattagtgttataattggaaaaaagtaattaatattg 42132789  T
Q  154 tattgaaa 161  Q
    ||||||||    
T  42132788 tattgaaa 42132781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 47277705 - 47277792
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||||  | |||||| ||||||||| ||||||||||    
T  47277705 gtatttgtacatttttctttatcataaatgtaaagtaaaatatattgaattgagagtgattaaagtagtattaattatagttataatt 47277792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 48740604 - 48740519
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||| |||||| |  ||||||||||||||||| |||||||||||||||| | |  |||||||||||||||||||||||||||    
T  48740604 gtattggtgcattctccactatcataaatgtaaagtggaatatattgaattaaaaatgataaaagtaatattaattagagttataa 48740519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 51076401 - 51076524
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaag---tagaatatattgaattaagagtagtaaaa 108  Q
    |||||||||||||||| ||| |||||||| |||||||||  | |||| || |||||| ||||||||||   || |||||||| |||| |||||  |||||    
T  51076401 agagagagaaatgattgtgaatgtctttgccaagtattgacatattcatcgttatcacaaatgtaaagtactaaaatatattaaattgagagtgataaaa 51076500  T
Q  109 gtaatattaattagagttataatt 132  Q
     |||||||||||||||||||||||    
T  51076501 ttaatattaattagagttataatt 51076524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 20964278 - 20964398
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| |||| ||||||||  ||| ||||||| |||||||||||||| |||||| |||||||||||||| |||||   ||| || ||||||    
T  20964278 agagagaaaaatgagtttgcgtgtctttatcaactattggtgcattcttctttatcgtaaatgcaaagtagaatatatcgaattggaagtggtgaaagta 20964377  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||  ||||||||    
T  20964378 gtattaattagtcttataatt 20964398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 22020509 - 22020620
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| ||||||||  ||||| ||| |||| ||||||| ||||| |||||||||| |||||||||||||||||||| ||| | || |||||| || ||||    
T  22020509 aaatggttttgagttcctttgtcaactatttgtacatttttctt-atcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtaataat 22020607  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  22020608 tagagttataatt 22020620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 37315954 - 37316070
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttg 153  Q
    |||| |||||||||||||||| |||||||||||| |||||||  |||| || |||||| |||||||||| |||||||||        ||||||||| |||    
T  37315954 catttttctttatcataaatgcaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaatgtaattaatattg 37316053  T
Q  154 tattgaaaactgaaatg 170  Q
    ||||||||| |||||||    
T  37316054 tattgaaaagtgaaatg 37316070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 27977256 - 27977145
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||||||||| ||||| ||||  |||||||||| |||||| |  ||| ||||||| ||||| |||||||||||||| |||||  | ||||| ||||||||    
T  27977256 aaatgattttaagtgtttttgttaagtattggtgcattctccactattataaatgcaaagtggaatatattgaattgagagtgatgaaagtgatattaat 27977157  T
Q  120 tagagttataat 131  Q
    ||||||||||||    
T  27977156 tagagttataat 27977145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 42544326 - 42544208
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    |||||||||||||||||| ||||   |||  ||||||| ||  ||||| |  ||||||||||| ||||| ||||||||||||||  ||||  ||||||||    
T  42544326 agagagagaaatgattttaagtgctcttgttaagtattagtctattctccactatcataaatgcaaagtggaatatattgaattgtgagtgataaaagta 42544227  T
Q  112 atattaattagagttataa 130  Q
    |||||||||||||||||||    
T  42544226 atattaattagagttataa 42544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 4354565 - 4354408
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||||||||| |||   || ||||||| || | |||||||||||||||||||  ||||||||||| |||| ||||| || ||||||    
T  4354565 agagagaaaaatagttttgagtgttttttttaaatattggtgcactattctttatcataaatgtaatttagaatatattaaattgagagttgtgaaagta 4354466  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
     ||||||||| ||||||||||         |||||||||||| |||||||| ||||||    
T  4354465 gtattaattatagttataattggagaaaaataattaatgttgcattgaaaagtgaaat 4354408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 3686097 - 3686010
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||| ||||||| ||||| |||||||||||||| |||||  | |||||||||||||||||||||||||    
T  3686097 aagtattggtgcattctccactattataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataa 3686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 49401773 - 49401690
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||| ||||  |||||| |||| ||  ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  49401773 agagagaaaaatagttttgaatgtccttttcaagtattgatacattgttctttattataaatgtaaagtagaatatattgaatt 49401690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 49218807 - 49218892
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||| |||||| |||||||||||||  |||||| ||||||||||||| ||||| || ||||||||||||||||  |||||||||    
T  49218807 tattggtgcattct-ctttatcataaattcaaagtataatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 49218892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 49448963 - 49448838
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||| |||| ||||   ||| |||||||| || ||||||   |||||||||||| |||||| ||||||||||||| ||| |  | |    
T  49448963 gaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatcataaatgcaaagtataatatattgaattgagaatgatga 49448864  T
Q  107 aagtaatattaattagagttataatt 132  Q
    ||||| ||||||||||||||||||||    
T  49448863 aagtagtattaattagagttataatt 49448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 53848755 - 53848674
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||||||||||| | ||  ||| ||||||| |||| || ||||||||||||| |||||||||||||||||||| |||||    
T  53848755 aaatgattttgagtgcccttatcaactattggtgcattattatttatcataaatgcaaagtagaatatattgaattgagagt 53848674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 54217416 - 54217243
Alignment:
Q  55 attcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgt 154  Q
    ||||||||||||||||| || |||||| |||||||||||||  |||| || |||||  |||||||||  |||||||||        ||||||||| ||||    
T  54217416 attcttctttatcataactgcaaagtataatatattgaattgggagtggtgaaagtggtattaattaatgttataattggaaaaaagtaattaatattgt 54217317  T
Q  155 attgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacggag 228  Q
    |||||||| |||||||| | ||  || |    ||| || |||||| |||||||||||| ||||| |||||||||    
T  54217316 attgaaaaatgaaatgagtcaatttttctagaacaatatttttttgtaaatgactcagctattatgggacggag 54217243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 4360400 - 4360619
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaat 113  Q
    ||||| ||||| |||| ||||  ||||  |||||||||| |||||| |  || |||||||| ||||| ||||||||||||||  || |  | |||||| |    
T  4360400 agagaaaaatggttttaagtgcttttgttaagtattggtgcattctccactagcataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagt 4360499  T
Q  114 attaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagt 213  Q
    |||||||||||||||| ||        |||||||||||||||||||||| ||||||   | ||  ||   |||||| || |||||| |||||| ||||||    
T  4360500 attaattagagttatatttggaaaaaagtaattaatgttgtattgaaaagtgaaattggtcaa-ttttttgtgacaatatttttttgtaaatggctcagt 4360598  T
Q  214 tattacgggacggagcgagta 234  Q
    ||||| ||||||||| |||||    
T  4360599 tattatgggacggagggagta 4360619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 8759854 - 8759778
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||| |||||||||||||||| ||||||||||||||||||||  |||| || ||| || |||||||||| |||||||    
T  8759854 catttttctttatcataaatgcaaagtagaatatattgaattgggagttgtgaaattattattaattagtgttataa 8759778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 30680441 - 30680517
Alignment:
Q  25 attttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    |||||||||||||||| | | |||||||  |||||||||||| |||||||||||||| |||||||| ||||| ||||    
T  30680441 attttgagtgtctttgtcgaatattggtggattcttctttatgataaatgtaaagtataatatattaaattaggagt 30680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 18849780 - 18849867
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||| |||||  |||||||||||||   ||| || |||||||||||||||||||||||||    
T  18849780 aagtattggtgcattctccactatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtaatattaattagagttataa 18849867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 49306673 - 49306586
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||| ||||  | |||||| ||||||||||||||||||    
T  49306673 aagtattggtctattctcccctatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtattaattagagttataa 49306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 11583895 - 11583981
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||  ||| |||||||| |||||||||||||| |||||||| |||| |||||  | ||||||||||||||||  |||||||||    
T  11583895 tattggtgtattattctttattataaatgtaaagtaaaatatattaaattgagagtgatgaaagtaatattaattaatgttataatt 11583981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 29644420 - 29644354
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||| ||||||||| ||||||||    
T  29644420 tatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaattatagttataa 29644354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 33093453 - 33093538
Alignment:
Q  15 gagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    |||||| ||| |||||||||| |||| |||| ||| ||  | |||||||||||||||||||||||||| |||||||||||| |||||    
T  33093453 gagagagatggttttgagtgt-tttgtcaagaattagtgaaatcttctttatcataaatgtaaagtaggatatattgaattgagagt 33093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 37309763 - 37309697
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| |||||  ||||||||||||| |||||  | |||||||||||||||||||||||||    
T  37309763 tatcataaatgcaaagttaaatatattgaattgagagtgatgaaagtaatattaattagagttataa 37309697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 41710186 - 41710252
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||  ||||  | |||||||||||||||||||||||||    
T  41710186 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 41710252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 55293579 - 55293509
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaa-tatattgaatt 95  Q
    |||||||||||||||  ||| |||||| ||||||| |||||||||||| |||||||||| |||||||||||    
T  55293579 ttttgagtgtctttgataagaattggtgcattcttgtttatcataaatataaagtagaattatattgaatt 55293509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 5499470 - 5499539
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| ||| ||| ||||||||||||||||| ||||  | |||||||||||||||||||| ||||||    
T  5499470 ttatcatagatgcaaaatagaatatattgaattaggagtgatgaaagtaatattaattagagtcataatt 5499539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 25250634 - 25250703
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| | ||||||||||||| ||||||||||  | ||| || ||||||||||||||||||||    
T  25250634 ttatcataaatgcatagtagaatatattaaattaagagtgatgaaactagtattaattagagttataatt 25250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 17346429 - 17346341
Alignment:
Q  375 aaccaccagctgctttttgaaatgctagagatggaaagtagtaaaagcttccaatttgatccttcacttgaagaatatatgtgaagttc 463  Q
    ||||||| ||||| || |||||||| || || ||||||||| || |||| ||||| ||||| || |||||||||||||| |||||||||    
T  17346429 aaccacctgctgccttgtgaaatgcaagggaaggaaagtagaaatagctaccaatctgatcttttacttgaagaatataagtgaagttc 17346341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 41436565 - 41436441
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaa 144  Q
    |||||||| |||||| |  ||||||||||| |||||||||||| |||||||  || |  | |||||| ||||||||||||||||||||         |||    
T  41436565 gtattggtgcattctccactatcataaatgcaaagtagaatattttgaattgcgaatgatgaaagtagtattaattagagttataattagaaaaaaataa 41436466  T
Q  145 ttaatgttgtattgaaaactgaaat 169  Q
    ||||| |||||||||||| ||||||    
T  41436465 ttaatattgtattgaaaagtgaaat 41436441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 46958834 - 46958719
Alignment:
Q  16 agagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatat 115  Q
    ||||||||  ||||||||||||| |  |||||| ||| ||||| |  |||||||||| | |||||||||||||||||||| |||||  | |||||| |||    
T  46958834 agagaaatagttttgagtgtctt-gttaagtatcggtgcattccttcttatcataaacgcaaagtagaatatattgaattgagagtgattaaagtagtat 46958736  T
Q  116 taattagagttataatt 132  Q
    ||||| || ||||||||    
T  46958735 taatttgaattataatt 46958719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 47846964 - 47846896
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| |||||  |||||||||||||| ||||  | |||||| ||||||||||||||||||||    
T  47846964 tatcataaatgcaaagtgaaatatattgaattaggagtgatgaaagtagtattaattagagttataatt 47846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 51572270 - 51572338
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||  |||||||||||||   |||  |||||||| ||||||||||||||||||||    
T  51572270 tatcataaatgtaaagtgtaatatattgaattggaagtgataaaagtagtattaattagagttataatt 51572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 25902460 - 25902535
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||| |||||||||| ||||  ||||||| || ||||||||||| | |||||| |||||| ||||||||||||||    
T  25902460 aaatggttttgagtgtttttgttaagtattagtgcattcttctttgttataaatataaagttgaatatattgaatt 25902535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 39979866 - 39979779
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||| ||| |||||| |  ||||||||||||||||| ||||||||||||||   | |  | |||||||||||||||||||||||||    
T  39979866 aagtatcggtgcattctccactatcataaatgtaaagtggaatatattgaattggaaatgatgaaagtaatattaattagagttataa 39979779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 41203823 - 41203736
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||| | ||||||||  || |||||||  ||||| |||||||||||||| | |||  |||||||| ||||||||||||||||||    
T  41203823 aagtattgatgcattcttcactaccataaatacaaagtggaatatattgaattgaaagtgataaaagtagtattaattagagttataa 41203736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 13719877 - 13719811
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaa 93  Q
    ||||||||||||||  ||||| || |  ||| ||||||||||||||||||||||| |||||||||||    
T  13719877 tttgagtgtctttgttaagtaatgatgtattattctttatcataaatgtaaagtataatatattgaa 13719811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 26799258 - 26799324
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||| |||||||||||||||| ||| |  | |||||| ||||||||||||||||||    
T  26799258 tatcataaatgcaaaatagaatatattgaattgagaatgatgaaagtactattaattagagttataa 26799324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 38977056 - 38976990
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||||| |||||||||||||| | | |  | |||||| ||||||||||||||||||    
T  38977056 tatcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 38976990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 9052091 - 9052160
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||| |||||||| ||||||||||||||||||| ||| |  | |||||| |||||||||| |||||||||    
T  9052091 ttattataaatgttaagtagaatatattgaattcagaatgatgaaagtagtattaattagtgttataatt 9052160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 29990478 - 29990582
Alignment:
Q  27 tttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagtt 126  Q
    |||||||||||| | ||||||||| | |||||||   |||||||||| |||||| |||||||||||||| | |||   |||| || ||||||||| ||||    
T  29990478 tttgagtgtctt-gtcaagtattgatgcattctttcatatcataaatataaagttgaatatattgaattgaaagtgaaaaaaatagtattaattaaagtt 29990576  T
Q  127 ataatt 132  Q
    ||||||    
T  29990577 ataatt 29990582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 1825292 - 1825356
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| |||||||||||||| | | |  | ||| |||||||||||||||||||||    
T  1825292 tcataaatgtaaagtggaatatattgaattgaaaatgatgaaaataatattaattagagttataa 1825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 17237108 - 17237040
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||||| |||||||||||||| | ||   | |||||| ||||||||||||||||||||    
T  17237108 tatcataaatgcaaagtggaatatattgaattgaaagcgatgaaagtagtattaattagagttataatt 17237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 17317668 - 17317728
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagt 80  Q
    ||||| ||||||| ||| ||| ||||||| ||||||||| || ||||||||||||||||||    
T  17317668 aaatggttttgagagtccttgacaagtatcggtacattcatcattatcataaatgtaaagt 17317728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 40020938 - 40021058
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||||| ||| |||| ||||||||||| ||||   | |||||||| ||| |||  |||||||||| ||||  ||||  | | ||||    
T  40020938 agagagaaaaatggttttgaatgtttttgtcaagtattggtgcatttaccattatcatagatgcaaaaaagaatatattaaattgggagtgatgacagta 40021037  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||||||||||||    
T  40021038 gtattaattagagttataatt 40021058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 28974392 - 28974305
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| | |||||||||||| ||||  |||||||||||| | |||||  | |||||| ||||||| ||| ||||||    
T  28974392 aagtattggtgcattctccattatcataaatgcaaaggggaatatattgaaatgagagtgatgaaagtagtattaatcagaattataa 28974305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 42015364 - 42015289
Alignment:
Q  371 ccaaaaccaccagctgctttttgaaatgctagagatggaaagtagtaaaagcttccaatttgatccttcacttgaa 446  Q
    ||||| |||||||||||| |||||||    || || ||||||||| |||| |||||||| ||||||||||||||||    
T  42015364 ccaaatccaccagctgctctttgaaaattaagtgaaggaaagtagaaaaaacttccaatctgatccttcacttgaa 42015289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 1796284 - 1796350
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||   ||| || |||||| ||| ||||||||||||||    
T  1796284 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtataaattagagttataa 1796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 5291772 - 5291706
Alignment:
Q  21 aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatat 87  Q
    |||| |||||||||  || | |||||||| || |||| ||||||||||||||||||| |||||||||    
T  5291772 aatggttttgagtgctttagtcaagtattagtgcattattctttatcataaatgtaatgtagaatat 5291706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 39258314 - 39258380
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| | ||||||||| |||| |||||  | |||||| ||||||||| ||||||||    
T  39258314 tatcataaatgtaaaatggaatatattaaattgagagtgatgaaagtattattaattaaagttataa 39258380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 54729526 - 54729591
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| |||||||||||||| || ||  | |||||| ||||||||||||||||||    
T  54729526 tatcataaatgcaaagtggaatatattgaattgag-gtgatgaaagtagtattaattagagttataa 54729591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 13529978 - 13529890
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| ||||| |||||||||||||  | || ||||||| |||| | | |||| ||||||||||||||||| |||| |||||| ||||    
T  13529978 agagagaaaaatggttttgagtgtcttgtg-aactattggtgcattttcccttatgataaatgtaaagtagaacatatcgaattaggagt 13529890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 25125117 - 25125174
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    ||||||||||||||||||| |||||||||||| | || |  | |||||||||||||||    
T  25125117 ttatcataaatgtaaagtaaaatatattgaatgaggaatgatgaaagtaatattaatt 25125174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 29136779 - 29136899
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt-agtaaaagt 110  Q
    ||||||| ||||| |||| ||  | |||| ||||||  ||| |||||  |||||||||||||| ||||| ||| ||||||||||  |||| | ||||| |    
T  29136779 agagagaaaaatggttttaagcatttttgtcaagtacgggtgcattcacctttatcataaatgcaaagtggaagatattgaatttggagtgactaaaa-t 29136877  T
Q  111 aatattaattagagttataatt 132  Q
    | ||||||||||||||||||||    
T  29136878 attattaattagagttataatt 29136899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 29815157 - 29815205
Alignment:
Q  82 gaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||   ||| || |||||||||||||||||||||||||    
T  29815157 gaatatattgaattggaagtggtgaaagtaatattaattagagttataa 29815205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 5357803 - 5357928
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| ||||| |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||   ||| || |    
T  5357803 gaaggagagagaaaaatggttttgagtgtctttgttaagtattggttcattcttctttatcataaatgtaaagtagaatatattgtattggaagtggtga 5357902  T
Q  107 aagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||||||||||    
T  5357903 aagtaatattaattagagttataatt 5357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 39060945 - 39061161
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| |||||||||| ||| |||  | | || ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||    
T  39060945 agagagaaaaatgagtttgagtgtccttgtcaaccactagtgcattcttctttatcataaatgcaaagtagaatatattgaattaggagtggtgaaagta 39061044  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactca 211  Q
    ||||||||||  |||||||||         |||||||| |||||||||||| |||||||||| ||  || |  ||||| || |||||| ||||||| |||    
T  39061045 atattaattaatgttataattaaaaaaatttaattaatattgtattgaaaagtgaaatgaatcaatttttctatgacaatatttttttgtaaatgattca 39061144  T
Q  212 gttattacgggacggag 228  Q
    ||||||| |||| ||||    
T  39061145 gttattatgggatggag 39061161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 36006891 - 36007104
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    ||||| |||| |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||   ||| || ||| ||||||||||    
T  36006891 aaatggttttaagtgtctttgtcaagtatttgtgcattcttctttatcataaatgtaaagtagaatatactgaattggaagtggtgaaaataatattaat 36006990  T
Q  120 tagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattac 219  Q
    |||||||||||||         |||| |||||||||||||||| ||||||  || || |||   | |||| || ||||||| |||||||||||||||||     
T  36006991 tagagttataattggaaaaa--taataaatgttgtattgaaaagtgaaatagatcaatatttttg-gacaatatttttttacaaatgactcagttattat 36007087  T
Q  220 gggacggagcgagtata 236  Q
    | ||||||| |||||||    
T  36007088 gagacggagggagtata 36007104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 10044785 - 10044629
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||||||||| |||  ||||||||| | ||||||| |||||||||||||||||||| | |||||||| || ||||| || ||||||    
T  10044785 agagagaaaaatagttttgagtgtatttttcaagtattgatgcattcttttttatcataaatgtaaagtaaagtatattgatttgagagttgtgaaagta 10044686  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaat 169  Q
    |||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  10044685 atattaattagagttataatt-aaaaaaagtaattaatgttgtattgaaaagtgaaat 10044629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 25111139 - 25111259
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||   ||| || ||||||    
T  25111139 agagagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagta 25111238  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||| | ||||||||    
T  25111239 gtattaattaaaattataatt 25111259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 25170230 - 25170350
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  ||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||   ||| || ||||||    
T  25170230 agagagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagta 25170329  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||| | ||||||||    
T  25170330 gtattaattaaaattataatt 25170350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 15898308 - 15898188
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| ||| |||||| ||   || ||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||    
T  15898308 agagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagta 15898209  T
Q  112 atattaattagagttataatt 132  Q
    ||||||||||| |||||||||    
T  15898208 atattaattagtgttataatt 15898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 13087733 - 13087851
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| |||||||||| ||  ||| ||||||| |||||| |||||||||||||| |||||||||||||||||||| ||||| || ||||||    
T  13087733 agagagaaaaatgagtttgagtgtccttatcaactattggtgcattct-ctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagta 13087831  T
Q  112 atattaattagagttataat 131  Q
    |||||||||||  |||||||    
T  13087832 atattaattagttttataat 13087851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 31090421 - 31090262
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||||||||||| | ||  ||| ||||||| ||||||||||||||||||| | |||||||||||||| ||||| |||||  | ||||||    
T  31090421 agagagaaaaatgattttgagtgcccttatcaactattggtgcattcttctttatcataaacgcaaagtagaatatatggaattgagagtgttgaaagta 31090322  T
Q  112 atattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
     |||||||||| ||||| |||        ||||||||| |||||||||||| ||||||||    
T  31090321 gtattaattagtgttatgattgaaaaaaagtaattaatattgtattgaaaagtgaaatga 31090262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 25108690 - 25108570
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||||||||||||||  |||||||| | |||||||||||||||||||||||||||| |||||||||||||   ||| || ||||||    
T  25108690 agagagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagta 25108591  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||| | ||||||||    
T  25108590 gtattaattaaaattataatt 25108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 25167782 - 25167662
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||||||||||||||  |||||||| | |||||||||||||||||||||||||||| |||||||||||||   ||| || ||||||    
T  25167782 agagagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagta 25167683  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||| | ||||||||    
T  25167682 gtattaattaaaattataatt 25167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 5147489 - 5147572
Alignment:
Q  14 agagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaa 97  Q
    ||||| ||||||||||||||||| ||  ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  5147489 agagaaaaatgattttgagtgtccttatcaactattggtgcattcttctttatcataaatgcaaagtagaatatattgaattaa 5147572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 13016355 - 13016473
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||| |||||||||| ||  ||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||  |||| || ||||||    
T  13016355 agagagaaaaatgagtttgagtgtccttatcaactattggtgcattct-ctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagta 13016453  T
Q  112 atattaattagagttataat 131  Q
    |||||||||||  |||||||    
T  13016454 atattaattagttttataat 13016473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 19889574 - 19889644
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||||||||||||||||||| | ||| || |||||||||||||||||||||||||||    
T  19889574 tttatcataaatgtaaagtagaatatattgaattgaaagtggtgaaagtaatattaattagagttataatt 19889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 42818985 - 42818864
Alignment:
Q  47 attggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaatt 146  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| || ||| || ||||||||||||||||||||        ||||||    
T  42818985 attggtgcattcttctttatcataaatgtaaagtagaatatattgaa-tgagagtggtgaaaatagtattaattagagttataattgaaaaaaagtaatt 42818887  T
Q  147 aatgttgtattgaaaactgaaat 169  Q
    ||| || ||||||||| ||||||    
T  42818886 aatattatattgaaaagtgaaat 42818864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 38978987 - 38978905
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||| || | |||| ||||||||||||||||    
T  38978987 tattggtacattcctctttatcataaatgcaaagtagaatatattaaattgagagttgtgatagtagtattaattagagttat 38978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 4044498 - 4044551
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4044498 caagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaatt 4044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 31956796 - 31956727
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||| ||||||||||| || |||||  |||||||||||||||||||||||||||||    
T  31956796 ttatcataaatgtaaagttgaatatattgagttgagagtgataaaagtaatattaattagagttataatt 31956727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 35968823 - 35968758
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattg 91  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||    
T  35968823 ttttgagtgtctttgtcaagtattagtacattcttctttattataaatataaagtagaatatattg 35968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 16926085 - 16926165
Alignment:
Q  15 gagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||| ||||| ||||||||| ||| |  |||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  16926085 gagaaaaatggttttgagtgccttcgttaagtattggtgcattcttctttatcataaatggaaagtagaatatattgaatt 16926165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 33988322 - 33988199
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||| ||| ||||| |||| ||||| ||||  ||||||||||  ||||| |  ||||||||||||||||| ||||||||||||||  ||||| | |    
T  33988322 gaaggagaaagaaaaatggttttaagtgtttttgttaagtattggtgtattctccactatcataaatgtaaagtggaatatattgaattgggagtaatga 33988223  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||||||| ||||||||||||||    
T  33988222 aagtaatatgaattagagttataa 33988199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 43525545 - 43525372
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaa 161  Q
    |||||||||||||||||||| ||||| |||||||   ||| || |||||| ||||||||||||||||||||          |||||||||||||||||||    
T  43525545 tttatcataaatgtaaagtataatatgttgaattggaagtggtgaaagtagtattaattagagttataattaaaaaaaa-aaattaatgttgtattgaaa 43525447  T
Q  162 actgaaatgaataaagattacggtgacagtaattttttataaatgactcagttattacgggacggagcgagtataa 237  Q
    |||||||||  | |||||| | |  ||| | |||||| |||||||  |||||||||| ||||||||| ||||||||    
T  43525446 actgaaatgtgtcaagatttctggaacaat-atttttcataaatggatcagttattatgggacggagggagtataa 43525372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 6629398 - 6629543
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtag-aatatattgaattaagagtagtaaaagtaatattaattagag 124  Q
    ||||||||||||| | ||||||||||| ||||||| ||||| ||||||| ||||| | |||||||| ||||  ||||  | ||||||| |||||||||||    
T  6629398 ttttgagtgtctt-gtcaagtattggtgcattcttttttattataaatgcaaagtggaaatatattaaattgggagtgatgaaagtaaaattaattagag 6629496  T
Q  125 ttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatga 171  Q
    ||||||||        ||||||| |||||||||||||| ||||||||    
T  6629497 ttataattagaaaaaagtaattattgttgtattgaaaagtgaaatga 6629543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 35646080 - 35646198
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||||||| ||||   |||  |||||||||| |||||| |  ||||||||||| ||||| |||||||||||||||  ||| || ||||||    
T  35646080 agagagaaaaatgattttaagtgatcttgttaagtattggtgcattctccactatcataaatgcaaagtggaatatattgaattagaagttgtgaaagta 35646179  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  35646180 gtattaattagagttataa 35646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 16883973 - 16884042
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||| |||||||||||||| | || || |||||| ||||||||||||||||||||    
T  16883973 ttatcataaatgtaaagtaaaatatattgaattaggggtggtgaaagtagtattaattagagttataatt 16884042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 792062 - 791982
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattaga 123  Q
    |||||||||| ||||| ||||||| ||||||| ||| ||||||||||||||||| |||| || |||||| |||||||||||    
T  792062 aagtattggtgcattcctctttattataaatgcaaaatagaatatattgaattatgagtggtgaaagtagtattaattaga 791982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 20189967 - 20189891
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||| | |||||||||||||||||| |||||||||||||| ||| |  | |||||||||||||||||||||||||    
T  20189967 cattctccattatcataaatgtaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataa 20189891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 39060408 - 39060492
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattg 91  Q
    |||| ||||||| ||||| |||||||||  ||||  |||||||||| ||||||||||||||||||||| |||||||| |||||||    
T  39060408 gaaggagagagaaaaatggttttgagtgcatttgttaagtattggtccattcttctttatcataaatgcaaagtagactatattg 39060492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 39183670 - 39183738
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||||| |||||||||||||| |||||  | |||||||||||||||||||||||||||    
T  39183670 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataatt 39183738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 6610959 - 6610836
Alignment:
Q  7 gaagcagagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaa 106  Q
    |||| ||||||| |||||| ||| ||||| |||   |||||||||| |||||| |  |||||||||||||||||  |||||||||||||  ||||  | |    
T  6610959 gaaggagagagaaaaatgagtttaagtgtttttattaagtattggtgcattctccactatcataaatgtaaagtgaaatatattgaattcggagtgatga 6610860  T
Q  107 aagtaatattaattagagttataa 130  Q
    ||||||||||||||| ||||||||    
T  6610859 aagtaatattaattaaagttataa 6610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 8369718 - 8369805
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||| ||||| |||||||||||||| | ||| || |||||| ||||||||||||||||||    
T  8369718 aagtattggtgcattctccactatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 8369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 17741160 - 17741284
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttcttt-atcataaatgtaaagtagaatata---ttgaattaagagtagtaaa 107  Q
    ||||||| ||||  ||||||||| |||||  |||||||| | ||||||| ||| ||||||||||||||||| ||||||   ||||||| |||||  | ||    
T  17741160 agagagaaaaatagttttgagtgcctttgttaagtattgatgcattctttttttatcataaatgtaaagtataatatagtattgaattgagagtgatgaa 17741259  T
Q  108 agtaatattaattagagttataatt 132  Q
    |||||||||||||| ||||||||||    
T  17741260 agtaatattaattatagttataatt 17741284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 34534985 - 34534919
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||| ||||||| ||||||||||||| ||| |  |||||||||||||||||||||||||||||    
T  34534985 tcataaatataaagtataatatattgaattgagaatgataaaagtaatattaattagagttataatt 34534919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 35988721 - 35988631
Alignment:
Q  42 caagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||||| |  |||||||||||| ||||| ||||||||||||||  |||| || ||||| |||||||||| ||||||||||    
T  35988721 caagtattggtgcattcattcttatcataaatgcaaagttgaatatattgaattgggagtggtgaaagtgatattaattaaagttataatt 35988631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 15254874 - 15254762
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||||||||| ||||| ||||  | ||||| || |||||| |  |||||| |||| ||| |||||||||||||||| | |||  | ||||||||||||||    
T  15254874 aaatgattttaagtgtttttgttatgtattagtgcattctccgctatcattaatgcaaattagaatatattgaattgaaagtgatgaaagtaatattaat 15254775  T
Q  120 tagagttataatt 132  Q
    |||||||||||||    
T  15254774 tagagttataatt 15254762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 17699398 - 17699330
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||| ||| ||||||||||||| |||||| | |||||| ||||||||| ||||||||||    
T  17699398 tatcataaatgtaaggtataatatattgaattgagagtaatgaaagtagtattaattaaagttataatt 17699330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 32659882 - 32659814
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataat 131  Q
    |||| ||||||| |||||| ||||||||||||| ||| | |||||||||||||| ||||||||||||||    
T  32659882 ttattataaatgcaaagtataatatattgaattgagactggtaaaagtaatatttattagagttataat 32659814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 36469093 - 36469205
Alignment:
Q  20 aaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaat 119  Q
    |||||||| | ||||| ||||  | |||||||| |||||| |  ||||||||||| |||||| ||||||||||||||| |||  | |||||| |||||||    
T  36469093 aaatgattataagtgtttttgttatgtattggtgcattctccactatcataaatgcaaagtataatatattgaattaaaagtgatgaaagtagtattaat 36469192  T
Q  120 tagagttataatt 132  Q
    |||| ||||||||    
T  36469193 tagaattataatt 36469205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 72147 - 72254
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaa 162  Q
    |||||||||||| ||||||||||||||| ||||| ||||  | |||||| ||||||||||| ||||||||        ||||||| | ||||||||||||    
T  72147 ttatcataaatgcaaagtagaatatattaaattaggagtgatgaaagtagtattaattagatttataattgggaaaaagtaattattattgtattgaaaa 72246  T
Q  163 ctgaaatg 170  Q
     |||||||    
T  72247 gtgaaatg 72254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 7871396 - 7871311
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||  ||| |||||||||||||||||||||||||||||||| ||||  |||| || |||||| ||||||||||  ||||||||    
T  7871396 tattggtgtatttttctttatcataaatgtaaagtagaatatattaaatt-ggagtggtgaaagtagtattaattagtattataatt 7871311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 11099468 - 11099586
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||  |||| ||||| ||||  |||||||||| |||||| |  ||||||||||  ||||| ||||||||||||||  ||||  | ||||||    
T  11099468 agagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataaatacaaagtggaatatattgaattgggagtgatgaaagta 11099567  T
Q  112 atattaattagagttataa 130  Q
     ||||||||||||||||||    
T  11099568 gtattaattagagttataa 11099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 17242997 - 17243063
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| |||||||||||||| |||||  | |||||| ||||||||||||||||||    
T  17242997 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaattagagttataa 17243063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 5073016 - 5072947
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||||||||||| |||||||||||||  ||| | |  ||||| ||||||||||||||||||||    
T  5073016 ttatcataaatgtaaagtaaaatatattgaattgggagcaatggaagtagtattaattagagttataatt 5072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 7311222 - 7311279
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    |||||||||||| ||||||||||||||||||||||||||  | ||||||| |||||||    
T  7311222 ttatcataaatgcaaagtagaatatattgaattaagagtgatgaaagtaacattaatt 7311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 16954967 - 16954899
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    |||||||||||||   | ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  16954967 ttttgagtgtcttcttcgagtattggtgcattctt-tttatcataaatgtaaaatagaatatattgaatt 16954899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 39212593 - 39212662
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| ||||||||||||||||||||  |||   | |||||| ||||||||||||||||||||    
T  39212593 ttatcataaatgcaaagtagaatatattgaattgggagcgatgaaagtagtattaattagagttataatt 39212662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 858418 - 858334
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||||||| | |||||||||||| ||| |  |||||||| |||| |||||  | |||||| ||||||||||||||||||    
T  858418 tattggtacattctccattatcataaatgcaaaatgaaatatatttaattgagagtgatgaaagtagtattaattagagttataa 858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 15564929 - 15564989
Alignment:
Q  62 tttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattag 122  Q
    ||||||||||||| ||||||||||||||| |||| |||||  | |||||||||||||||||    
T  15564929 tttatcataaatgcaaagtagaatatattaaattgagagtgatgaaagtaatattaattag 15564989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 30437744 - 30437804
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaata 86  Q
    |||||||||| ||||  || ||||||| |||| ||||||||||||||||||||||||||||    
T  30437744 ttttgagtgtttttgttaattattggtccattattctttatcataaatgtaaagtagaata 30437804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 3725272 - 3725185
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  ||||||||||| | ||| |||||||| |||||  ||||  | |||||||||||||||||||||||||    
T  3725272 aagtattggtgcattctccactatcataaatgcatagtggaatatatcgaattgtgagtgatgaaagtaatattaattagagttataa 3725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 7613793 - 7613706
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| |  |||||||||||||||||  |||||||||||||   | |  |||||||||||||||||| ||||||||    
T  7613793 aagtattggtgcattctccactatcataaatgtaaagtgaaatatattgaattggaaatgataaaagtaatattaattatagttataa 7613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 14184091 - 14184201
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt-nnnnnnnngtaattaatgttgtattgaaa 161  Q
    ||||||||||||||| ||| ||||||||||||| |||||| | ||| | |||||||||| ||||||||||         ||||||||| |||||||||||    
T  14184091 ttatcataaatgtaa-gtataatatattgaattgagagtaatgaaaatgatattaattatagttataattggaaaaaaagtaattaatattgtattgaaa 14184189  T
Q  162 actgaaatgaat 173  Q
    | ||||||||||    
T  14184190 agtgaaatgaat 14184201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 39035888 - 39036007
Alignment:
Q  54 cattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttg 153  Q
    ||||| |||||||||||| |  |||||  |||||||| |||| ||||| ||||||||| | |||||||| ||||||| |        ||||||||| |||    
T  39035888 cattcctctttatcataactacaaagtgaaatatattaaattgagagtggtaaaagtagttttaattagtgttataagtagaaaaaggtaattaatattg 39035987  T
Q  154 tattgaaaactgaaatgaat 173  Q
    ||||||||| ||||||||||    
T  39035988 tattgaaaagtgaaatgaat 39036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 25344780 - 25344838
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatta 121  Q
    ||||||||||||||||||||||||||||||||| ||| |  | |||||| |||||||||    
T  25344780 ttatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaatta 25344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 35334569 - 35334635
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||  ||||  | |||||| ||||||||||||||||||    
T  35334569 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataa 35334635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 42575629 - 42575747
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||| |||| ||||   |||| ||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||   ||| || ||||||    
T  42575629 agagagaaaaatggttttaagtgctcttggtaagtattggtgtattctccactatcataaatgcaaagtggaatatattgaattggaagttgtgaaagta 42575728  T
Q  112 atattaattagagttataa 130  Q
     ||||||||| ||||||||    
T  42575729 gtattaattaaagttataa 42575747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 6173022 - 6173091
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||| |||||| |||||||||||||  ||||  | |||||| ||||||||| ||||||||||    
T  6173022 ttatcataaatgcaaagtataatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 6173091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 8692840 - 8692968
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngt 142  Q
    |||||||||| |||||| |  ||||||||||| ||| |  |||||||| ||||   ||| || |||||||||||||||||||||||||          ||    
T  8692840 aagtattggtgcattctccactatcataaatgcaaaatgaaatatattaaattggaagttgtgaaagtaatattaattagagttataaaggaaaaaaagt 8692939  T
Q  143 aattaatgttgtattgaaaactgaaatga 171  Q
    ||||||| |||||||||||| ||||||||    
T  8692940 aattaatattgtattgaaaaatgaaatga 8692968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 16283630 - 16283698
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    ||||||||||| ||||| |||||||||||||| |||||  | ||||||  || ||||||||||||||||    
T  16283630 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagcatcaattagagttataatt 16283698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 41184203 - 41184116
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||  |||||| | |||||||| || |||||| ||||| ||| |||| ||| |  | |||||||||||||||||||||||||    
T  41184203 aagtattggggcattctccattatcatagatttaaagtggaataaattaaattgagaatgatgaaagtaatattaattagagttataa 41184116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 4195049 - 4194975
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaata 86  Q
    ||||||| ||||| ||||||||| | ||   || ||||| | ||||||||||||||||||||| |||||||||||    
T  4195049 agagagaaaaatggttttgagtgcccttatgaactattgatgcattcttctttatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 6735379 - 6735465
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttata 129  Q
    ||||||| || |||||| |  ||||||||||| ||||| ||||||||| ||||   |||  | ||||||||||||||||||||||||    
T  6735379 aagtatttgtgcattctccactatcataaatgcaaagtggaatatattaaatttgaagtgatgaaagtaatattaattagagttata 6735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 13135818 - 13135752
Alignment:
Q  64 tatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||| ||||| ||||||||||||||| ||||  | |||||| || |||||| ||||||||    
T  13135818 tatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtagtaattaaagttataa 13135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 13422414 - 13422503
Alignment:
Q  83 aatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaattaatgttgtattgaaaactgaaatgaat 173  Q
    ||||||||||||| |||||  | |||||||||||||||| ||||||||||         |||||||| |||||||||||| ||||||||||    
T  13422414 aatatattgaattgagagtgatgaaagtaatattaattatagttataattaaaaataa-taattaatattgtattgaaaagtgaaatgaat 13422503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 146748 - 146797
Alignment:
Q  69 taaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaa 118  Q
    |||||| |||||||||||||||||||| |||||  |||||||| ||||||    
T  146748 taaatgcaaagtagaatatattgaattgagagtgataaaagtagtattaa 146797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 6239118 - 6239199
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagag 124  Q
    ||||||||||| |||| || |||  |||||||||||| |||| ||||| |||||| |||  |  ||||||||||||||||||    
T  6239118 aagtattggtatattcatccttacaataaatgtaaaggagaaaatattaaattaaaagtgatgcaagtaatattaattagag 6239199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 31196422 - 31196337
Alignment:
Q  26 ttttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||||||| ||| ||  ||||| | |||| |||||||| ||| ||| |||||||||||||||| ||| ||||| || ||||||    
T  31196422 ttttgagtgtccttgtcatttattgctgcatttttctttattatacatgcaaagtagaatatattggattgagagtggtgaaagta 31196337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 42158688 - 42158753
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttat 128  Q
    |||||||||||| |||||| ||||| ||||||| |||    | |||||||||||||||||||||||    
T  42158688 ttatcataaatgcaaagtaaaatatgttgaattgagaaagatgaaagtaatattaattagagttat 42158753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 20364656 - 20364580
Alignment:
Q  12 agagagaga-aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatat 87  Q
    ||||||||| |||| |||||||||  || | |||||||| || || | |||||||| ||||||||||||||||||||    
T  20364656 agagagagagaatggttttgagtgctttagtcaagtattagtgcactattctttattataaatgtaaagtagaatat 20364580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 22398345 - 22398313
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||||||||||||| |||||||||||||||    
T  22398345 ttatcataaatgtaaagcagaatatattgaatt 22398313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 25814450 - 25814398
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaatt 95  Q
    ||||||||||||||| | |  |||||||||||||||||  |||||||||||||    
T  25814450 aagtattggtacattatccactatcataaatgtaaagtgaaatatattgaatt 25814398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 12435 - 12545
Alignment:
Q  21 aatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaatt 120  Q
    |||| ||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| | || |||||| ||||||||    
T  12435 aatggttttgagtgtctttgtcaagtattagtgcattcttctttattataaatgtaaagtagaatatattgaattaagaatggtgaaagtagtattaatt 12534  T
Q  121 agagttataat 131  Q
    |||||||||||    
T  12535 agagttataat 12545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 5935 - 5817
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| ||||||| ||||||||||||  ||||||||| | ||||  |||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  5935 agagagaaaaatgatcttgagtgtctttatcaagtattgatgcattgctctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagta 5836  T
Q  112 atattaattagagttataa 130  Q
     ||||||||| ||||||||    
T  5835 gtattaattaaagttataa 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 10781 - 10901
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||| |||||  |||||||||| ||  ||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||| |||| || ||||||    
T  10781 agagagaaaaatgggtttgagtgtccttatcaactattggttcattcttctttatcataaatgcaaagtaaaatatattgaattaggagtggtgaaagta 10880  T
Q  112 atattaattagagttataatt 132  Q
     ||||||||||  ||||||||    
T  10881 gtattaattagttttataatt 10901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 8971 - 8886
Alignment:
Q  45 gtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||| |||||| |  ||| ||||||| ||||| |||||||||||||| ||| |  | |||||||||||||||||||||||||    
T  8971 gtattggtgcattctccactattataaatgcaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataa 8886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 7978 - 8101
Alignment:
Q  46 tattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataattnnnnnnnngtaat 145  Q
    ||||||| ||||  |||||||||||||||||||||| ||||||||||||| ||| | || |||||| ||||||||| ||||||||||        |||||    
T  7978 tattggtgcatttctctttatcataaatgtaaagtaaaatatattgaattgagaattgtgaaagtagtattaattaaagttataattgggaaaaagtaat 8077  T
Q  146 taatgttgtattgaaaactgaaat 169  Q
    | || |||||||||||| ||||||    
T  8078 tgatattgtattgaaaagtgaaat 8101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 171292 - 171223
Alignment:
Q  63 ttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataatt 132  Q
    |||||||||||||||||||||||||||||||||| ||||  | ||||||||||||||  |||||||||||    
T  171292 ttatcataaatgtaaagtagaatatattgaattaggagtgatgaaagtaatattaatatgagttataatt 171223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 220110 - 220009
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagta 111  Q
    ||||||||| ||| ||||||||||| ||  ||| ||||  | || |||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||    
T  220110 agagagagagatggttttgagtgtccttatcaactatttatgcaatcttctttatcataaatgcaaaatagaatatattgaattgagagtggtgaaagta 220011  T
Q  112 at 113  Q
    ||    
T  220010 at 220009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 229909 - 229822
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||||||| |||||| | |||||||||||| ||||| | ||||||||||||   ||| || |||||| ||||||||||||||||||    
T  229909 aagtattggtgcattctccattatcataaatgcaaagtggtatatattgaattggaagttgtgaaagtagtattaattagagttataa 229822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 394864 - 394777
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  |||||||| ||||||||||  ||||| ||||||| |||||| |||||  | |||||| ||||||||||||||||||    
T  394864 aagtattggtctattcttctctatcataaatacaaagtggaatatagtgaattgagagtgatgaaagtagtattaattagagttataa 394777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 681 - 593
Alignment:
Q  12 agagagagaaatgattttgagtgtctttggcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagt 101  Q
    ||||||| || || |||||||||||||   ||| ||||||| ||||||||||||||||||||  ||||||||||||| |||||| |||||    
T  681 agagagaaaattggttttgagtgtcttat-caactattggtgcattcttctttatcataaatccaaagtagaatataatgaattgagagt 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 230335 - 230255
Alignment:
Q  50 ggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||   |||||||||||| ||| | ||||||||||||||   ||| || |||||||||||||||||||||||||    
T  230335 ggtacattctctgttatcataaatgcaaaatggaatatattgaattggaagttgtgaaagtaatattaattagagttataa 230255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 98886 - 98824
Alignment:
Q  68 ataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    |||||| |||||| |||||||||||||| |||||  | ||| |||||||||||||||||||||    
T  98886 ataaatataaagtggaatatattgaattgagagtgatgaaaataatattaattagagttataa 98824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 14519 - 14455
Alignment:
Q  66 tcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||||||| |||||||||||||| | | |  | |||||| ||||||||||||||||||    
T  14519 tcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 14455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 26699 - 26612
Alignment:
Q  43 aagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattaagagtagtaaaagtaatattaattagagttataa 130  Q
    ||||||||||  ||||| |  ||||||||||| ||||| ||||||||||||||  ||||  | |||||| ||||||||||| ||||||    
T  26699 aagtattggtctattctccactatcataaatgcaaagtggaatatattgaattgcgagtgatgaaagtagtattaattagaattataa 26612  T

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