View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10591_low_23 (Length: 241)
Name: NF10591_low_23
Description: NF10591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10591_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 36540937 - 36541034
Alignment:
| Q |
30 |
gcaagcaagataggtagaaatttattagtttccagcgcctcattgaatgtatgggtatgtactatctattgataactacaagagcttgaactaataag |
127 |
Q |
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| T |
36540937 |
gcaagcaagataggtagaaatttattagtttccagcgcctcatttaatgtatgggtatgtactatctattgataactacaagagcttgaactaataag |
36541034 |
T |
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Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 36541412 - 36541498
Alignment:
| Q |
132 |
agaaatagaaaatatctgttgctattcatgttgttacaatagaaatcatcccttagagagaaataatatcatatgggggtgttacaa |
218 |
Q |
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| T |
36541412 |
agaaatagaaaacatttgttgctattcatgttgttacaatagaaatcatcccttagagagaaataatatcatatagaggtgttacaa |
36541498 |
T |
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