View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10591_low_5 (Length: 434)
Name: NF10591_low_5
Description: NF10591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10591_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 18 - 425
Target Start/End: Complemental strand, 13766284 - 13765877
Alignment:
| Q |
18 |
aggagaagatcttaagcagatttgctggagtataaaattgctcaaacataaccttgacatcagctttcaacatatttcgcaaccgtgtaaagaagttgag |
117 |
Q |
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| T |
13766284 |
aggagaagatcttaagcagatttgctggagtataaaattgctcaaacataatctcgatgtcagctttcaacatatttcgcaaccgtataaagaagttgag |
13766185 |
T |
|
| Q |
118 |
attaaatccgtccggtatagggatctcgttaccatccacactagaaaccaccaattccatttttgaaaccaagactagagctaacaacaggacattatcc |
217 |
Q |
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| T |
13766184 |
attaaatccgtccggcctagggctctcgttaccatccagactagaaaccaccaattccatttttgaaaccaagaattgagctgacaacagaacattatcc |
13766085 |
T |
|
| Q |
218 |
aaattagaaatatgaatgaaatcaatatcgaccatggtcggtctataggtctatgggtctgagaaatgatgcgtaaagaaattcacaatcgcttgtttga |
317 |
Q |
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|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13766084 |
aaattagaaatatgaaagaaatcaatatcgcccatggtcggtctataggtctatgggtctgagaaatgatgcgtaaagaaattcacaatcgcttgtttgt |
13765985 |
T |
|
| Q |
318 |
tctttgcaacatcctccatccacctttccaccctaggtgccgagatggaattcctcatacctctattcttcacacaggcgtggaaataagttgtatgatg |
417 |
Q |
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||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
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| T |
13765984 |
tctttgcaacatcatccatccacctttccaccctaggagccgagatggaattcctcatacctctattcttcacacaggcgaggaaataagttgtattatg |
13765885 |
T |
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| Q |
418 |
tccatctc |
425 |
Q |
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| T |
13765884 |
tccttctc |
13765877 |
T |
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