View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10592_2 (Length: 326)

Name: NF10592_2
Description: NF10592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10592_2
NF10592_2
[»] chr5 (24 HSPs)
chr5 (1-312)||(38816628-38816932)
chr5 (136-211)||(19820428-19820503)
chr5 (162-291)||(22423764-22423895)
chr5 (136-203)||(22013364-22013431)
chr5 (136-210)||(42469171-42469245)
chr5 (244-293)||(8420075-8420124)
chr5 (161-210)||(15410483-15410532)
chr5 (158-210)||(6326332-6326384)
chr5 (239-291)||(9929668-9929720)
chr5 (151-211)||(13287433-13287493)
chr5 (175-259)||(3966492-3966577)
chr5 (168-211)||(7175053-7175096)
chr5 (151-209)||(15382442-15382500)
chr5 (263-293)||(24906250-24906280)
chr5 (175-208)||(6035472-6035505)
chr5 (158-211)||(21191090-21191143)
chr5 (178-211)||(39205872-39205905)
chr5 (172-209)||(41542507-41542544)
chr5 (178-210)||(2039884-2039916)
chr5 (175-211)||(17123037-17123073)
chr5 (158-202)||(21522722-21522766)
chr5 (158-202)||(21533288-21533332)
chr5 (175-211)||(27144452-27144488)
chr5 (185-213)||(32766975-32767003)
[»] chr7 (30 HSPs)
chr7 (136-210)||(27944991-27945065)
chr7 (131-291)||(7328639-7328805)
chr7 (136-207)||(2034392-2034462)
chr7 (136-210)||(24105629-24105702)
chr7 (161-211)||(26733279-26733329)
chr7 (179-261)||(29787354-29787435)
chr7 (158-211)||(11722132-11722185)
chr7 (149-259)||(24339605-24339716)
chr7 (186-291)||(11700803-11700909)
chr7 (161-242)||(19206025-19206107)
chr7 (175-259)||(32308109-32308194)
chr7 (136-211)||(43027503-43027578)
chr7 (137-211)||(598160-598233)
chr7 (160-210)||(5235960-5236010)
chr7 (151-211)||(1433419-1433479)
chr7 (151-211)||(17851396-17851456)
chr7 (160-211)||(2425767-2425818)
chr7 (151-210)||(43249958-43250017)
chr7 (169-211)||(8046061-8046103)
chr7 (193-259)||(9933282-9933347)
chr7 (175-242)||(22484014-22484082)
chr7 (169-211)||(23191879-23191921)
chr7 (180-254)||(30731031-30731104)
chr7 (178-251)||(11072290-11072362)
chr7 (263-292)||(17852091-17852120)
chr7 (160-209)||(49107795-49107844)
chr7 (263-291)||(15680900-15680928)
chr7 (175-211)||(20549780-20549816)
chr7 (151-211)||(21141016-21141076)
chr7 (175-211)||(42720924-42720960)
[»] chr6 (31 HSPs)
chr6 (158-259)||(10294079-10294181)
chr6 (151-211)||(5000660-5000720)
chr6 (151-211)||(9027143-9027203)
chr6 (161-291)||(8805524-8805656)
chr6 (162-210)||(13851712-13851760)
chr6 (136-211)||(853893-853968)
chr6 (151-259)||(16766662-16766771)
chr6 (175-291)||(7723199-7723320)
chr6 (151-291)||(5732474-5732604)
chr6 (136-204)||(8365560-8365628)
chr6 (138-210)||(12696277-12696348)
chr6 (151-259)||(9107355-9107464)
chr6 (160-211)||(9629357-9629408)
chr6 (136-211)||(30866178-30866253)
chr6 (136-210)||(6389693-6389767)
chr6 (161-211)||(9658854-9658904)
chr6 (173-211)||(19040339-19040377)
chr6 (136-210)||(25038106-25038180)
chr6 (136-204)||(3398569-3398637)
chr6 (151-211)||(7938081-7938141)
chr6 (244-291)||(426478-426525)
chr6 (151-210)||(7977865-7977924)
chr6 (167-210)||(10760876-10760919)
chr6 (168-211)||(20371144-20371187)
chr6 (263-293)||(34073276-34073306)
chr6 (151-254)||(34073337-34073441)
chr6 (158-211)||(426548-426601)
chr6 (250-291)||(2117134-2117175)
chr6 (170-211)||(7265627-7265668)
chr6 (159-211)||(8777007-8777059)
chr6 (151-211)||(34595099-34595159)
[»] chr2 (24 HSPs)
chr2 (136-211)||(20539708-20539783)
chr2 (136-247)||(21782817-21782927)
chr2 (136-200)||(33519736-33519800)
chr2 (151-242)||(4332891-4332981)
chr2 (161-211)||(21616737-21616787)
chr2 (151-241)||(28412315-28412404)
chr2 (185-242)||(1327977-1328033)
chr2 (136-209)||(19536434-19536507)
chr2 (135-208)||(23717976-23718048)
chr2 (135-208)||(24105648-24105720)
chr2 (186-259)||(44860320-44860394)
chr2 (244-291)||(19536361-19536408)
chr2 (244-291)||(19574031-19574078)
chr2 (244-290)||(18255945-18255991)
chr2 (175-213)||(29970581-29970619)
chr2 (244-290)||(34691770-34691816)
chr2 (244-290)||(34714182-34714228)
chr2 (161-259)||(36409614-36409711)
chr2 (168-210)||(39323246-39323288)
chr2 (151-236)||(18276486-18276570)
chr2 (137-202)||(21624217-21624282)
chr2 (175-207)||(6736479-6736511)
chr2 (167-211)||(22084866-22084910)
chr2 (255-291)||(42511322-42511358)
[»] chr8 (19 HSPs)
chr8 (158-259)||(22651948-22652050)
chr8 (153-259)||(29510289-29510396)
chr8 (136-204)||(25192388-25192456)
chr8 (145-211)||(926822-926888)
chr8 (169-211)||(34897068-34897110)
chr8 (158-211)||(27213519-27213572)
chr8 (136-204)||(126390-126457)
chr8 (151-211)||(2572090-2572150)
chr8 (163-259)||(29776013-29776108)
chr8 (136-211)||(13436998-13437073)
chr8 (168-211)||(31109552-31109595)
chr8 (149-211)||(24362236-24362298)
chr8 (162-232)||(36934646-36934715)
chr8 (178-211)||(39954313-39954346)
chr8 (175-211)||(20679429-20679465)
chr8 (136-204)||(28642358-28642426)
chr8 (136-204)||(28745448-28745516)
chr8 (171-211)||(31236611-31236651)
chr8 (188-244)||(37283812-37283867)
[»] scaffold0306 (1 HSPs)
scaffold0306 (135-211)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (136-291)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (135-211)||(21902-21978)
[»] chr1 (26 HSPs)
chr1 (159-211)||(6427323-6427375)
chr1 (151-211)||(40917716-40917776)
chr1 (152-211)||(398799-398858)
chr1 (238-291)||(48547938-48547991)
chr1 (159-211)||(2896155-2896207)
chr1 (144-290)||(10572535-10572690)
chr1 (135-210)||(5376535-5376609)
chr1 (136-211)||(5927374-5927449)
chr1 (190-293)||(44482234-44482343)
chr1 (158-211)||(20157384-20157437)
chr1 (167-211)||(12443494-12443538)
chr1 (175-211)||(17831565-17831601)
chr1 (175-211)||(36878450-36878486)
chr1 (158-250)||(1486703-1486796)
chr1 (175-210)||(21057772-21057807)
chr1 (151-251)||(38503285-38503386)
chr1 (149-204)||(48040503-48040558)
chr1 (158-236)||(1262856-1262933)
chr1 (168-210)||(2851004-2851045)
chr1 (161-211)||(9709795-9709845)
chr1 (161-211)||(34298411-34298461)
chr1 (136-211)||(38078695-38078771)
chr1 (136-210)||(39130802-39130876)
chr1 (142-211)||(19324518-19324587)
chr1 (159-211)||(16297317-16297369)
chr1 (175-211)||(19562655-19562691)
[»] chr3 (25 HSPs)
chr3 (136-211)||(8383207-8383282)
chr3 (149-248)||(5441029-5441128)
chr3 (172-261)||(8039818-8039908)
chr3 (151-210)||(24205076-24205135)
chr3 (136-202)||(8842280-8842346)
chr3 (167-232)||(5407261-5407325)
chr3 (151-211)||(3164059-3164119)
chr3 (175-211)||(6525714-6525750)
chr3 (151-211)||(28917966-28918026)
chr3 (151-210)||(4991002-4991061)
chr3 (145-204)||(10335327-10335386)
chr3 (172-211)||(13620798-13620837)
chr3 (136-259)||(25064859-25064981)
chr3 (136-211)||(55401025-55401100)
chr3 (255-293)||(4466538-4466576)
chr3 (263-293)||(5440965-5440995)
chr3 (160-210)||(9800014-9800064)
chr3 (255-293)||(13807237-13807275)
chr3 (169-211)||(23870593-23870635)
chr3 (137-211)||(32429414-32429488)
chr3 (175-236)||(15544682-15544742)
chr3 (159-211)||(2620087-2620139)
chr3 (151-211)||(15796328-15796388)
chr3 (159-211)||(26492239-26492291)
chr3 (255-291)||(27505334-27505370)
[»] scaffold0168 (3 HSPs)
scaffold0168 (145-291)||(21002-21149)
scaffold0168 (230-291)||(21217-21278)
scaffold0168 (230-291)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (151-211)||(8763-8823)
[»] scaffold0475 (1 HSPs)
scaffold0475 (151-210)||(3281-3340)
[»] scaffold0007 (1 HSPs)
scaffold0007 (151-210)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (151-259)||(241559-241668)
[»] chr4 (14 HSPs)
chr4 (151-209)||(20633450-20633508)
chr4 (151-211)||(23293020-23293080)
chr4 (175-210)||(35723420-35723455)
chr4 (130-211)||(7670625-7670709)
chr4 (175-209)||(17345451-17345485)
chr4 (188-259)||(30982863-30982935)
chr4 (153-210)||(847918-847975)
chr4 (177-210)||(5096131-5096164)
chr4 (161-210)||(30838185-30838234)
chr4 (158-211)||(36635296-36635349)
chr4 (136-211)||(5775392-5775469)
chr4 (179-211)||(5832728-5832760)
chr4 (247-291)||(18844423-18844467)
chr4 (255-291)||(28470448-28470484)
[»] scaffold0004 (1 HSPs)
scaffold0004 (169-210)||(92790-92831)
[»] scaffold0122 (1 HSPs)
scaffold0122 (151-248)||(8631-8729)
[»] scaffold0044 (1 HSPs)
scaffold0044 (176-261)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (139-211)||(178853-178925)
scaffold0018 (169-210)||(192284-192325)
[»] scaffold0085 (1 HSPs)
scaffold0085 (177-211)||(26384-26418)
[»] scaffold0652 (1 HSPs)
scaffold0652 (151-211)||(496-556)
[»] scaffold0450 (1 HSPs)
scaffold0450 (263-291)||(8564-8592)
[»] scaffold0027 (1 HSPs)
scaffold0027 (245-293)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 38816932 - 38816628
Alignment:
Q  1 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38816932 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataat 38816833  T
Q  101 ttgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||| ||||||||||||||||    
T  38816832 ttgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactcc-------gcacggatactgacacgccgacaccgctaataat 38816740  T
Q  201 ttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcg 300  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38816739 ttgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcg 38816640  T
Q  301 tgaatcgtgata 312  Q
    ||||||||||||    
T  38816639 tgaatcgtgata 38816628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||  |||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  162 acacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 258  Q
    ||||| |||||||||||||||   |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  259 atggctaattcgaggagtgtccgtgcttcatag 291  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttg 203  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||| |||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| | |||||| ||| ||||| |||||||| ||||||| |||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| |||||| ||||||||| |||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||||| |||||| ||||||||| ||||| ||||| ||||||||||||||    
T  6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  239 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 13287493 - 13287433
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| ||| |||||||||||| | ||||||||||| ||||||    
T  13287493 acggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatc 13287433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||| | ||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 7175096 - 7175053
Alignment:
Q  168 cacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||    
T  7175096 cacggacactgacacatcgacaccgttaataatttgagaaaatc 7175053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaa 209  Q
    |||||| ||||||||| |||||| | ||||||| |||||| ||||||||||||| ||||    
T  15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaa 208  Q
    ||||||||| ||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||| ||||||| | |||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 39205872 - 39205905
Alignment:
Q  178 gacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| ||||||||||||||||||||    
T  39205872 gacacgtcgacactgctaataatttgagaaaatc 39205905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 41542544 - 41542507
Alignment:
Q  172 gatactgacacgtcgacaccgctaataatttgagaaaa 209  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  41542544 gatactgacacgttgacaccgataataatttgagaaaa 41542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 2039916 - 2039884
Alignment:
Q  178 gacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||||| |||||||||||||||||    
T  2039916 gacacgtcgacaccggtaataatttgagaaaat 2039884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataattt 202  Q
    ||||||||| |||||| ||||||||| |||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataattt 202  Q
    ||||||||| |||||| ||||||||| |||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 32767003 - 32766975
Alignment:
Q  185 cgacaccgctaataatttgagaaaatcgc 213  Q
    |||||||||||||||||||||||||||||    
T  32767003 cgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 291
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  131 atatactatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat- 229  Q
    ||||||||||||||||| |||||||| ||| ||||| ||| || | | ||||||||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  230 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaa 207  Q
    |||||||||||| ||||||| | | |||||| |||||||||| ||||||||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| ||||||| | |||||||| |||||| ||||||||| |||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
Q  179 acacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 261  Q
    ||||| ||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||    
T  11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  149 atacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 246  Q
    |||||||| ||||||||| || ||| | ||||||| |||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  247 tcggtgtcggaca 259  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 11700803 - 11700909
Alignment:
Q  186 gacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgtccgtg 283  Q
    ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| |||||||||||| ||    
T  11700803 gacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgtccctg 11700901  T
Q  284 cttcatag 291  Q
     |||||||    
T  11700902 attcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 242  Q
    |||||| |||||| ||  ||||| ||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| || ||||| | ||||||| |||||| ||||||||| |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 598160 - 598233
Alignment:
Q  137 tatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||  |||||| || |||| | |||||| |||||||| ||||||||||||||||||| ||||||||    
T  598160 tatgaagcacgac-acggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatc 598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 5235960 - 5236010
Alignment:
Q  160 ggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||| ||| || |||||||||||||||||||||||||||| |||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaat 5236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||| ||||| |||||| | ||||||| |||||||| ||||||||||||||||||    
T  1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 17851396 - 17851456
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| || |||||| ||||| |||| |||||||||||||| ||||||||    
T  17851396 acggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatc 17851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  160 ggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||| ||| |||||||||||| || ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||| | |||||| ||||||||| |||||| | |||||||||||||||||    
T  43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  169 acggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| | ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  193 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 242  Q
    ||||||||| |||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  169 acggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  180 cacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 254  Q
    |||| ||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
Q  178 gacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 251  Q
    |||||| |||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagt 292  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  160 ggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaa 209  Q
    ||||||| ||||||  |||||||  |||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 291
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||  |||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 21141076 - 21141016
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||| ||||| ||||||  | |||||||||||||| |||||||||| ||||||||    
T  21141076 acggacaccgtacacgacacggacgccgacacgtcgacaccactaataatttaagaaaatc 21141016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 42720960 - 42720924
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  42720960 actgacacgttgacaccgctaataatttgaaaaaatc 42720924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 255  Q
    ||||||||| |||||||||||||| | ||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  256 gaca 259  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 8805656 - 8805524
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg---tgtcgga 257  Q
    |||||| ||| || || ||||||||| ||| |||||||||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || |||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtggga 8805558  T
Q  258 catggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||| ||||| |||||||||||||||||||||||    
T  8805557 catgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  162 acacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||| |||||||| ||||||||| ||||||| |||||||| ||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 248  Q
    |||||| ||||||||| || ||| ||||||||| |||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
T  16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
Q  249 ggtgtcggaca 259  Q
    |||||||||||    
T  16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 7723320 - 7723199
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgt--cgg--acatggctaatt 268  Q
    |||||||||| ||||| ||||||||||||||||||||  |||| ||||  |||||  ||||| ||||||| ||||||||||  |||  ||| | |||||     
T  7723320 actgacacgtggacactgctaataatttgagaaaatc-atataattcagcataattatatgtatcggtgtcgtgtcggtgttacggaaacacgcctaatc 7723222  T
Q  269 cgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||||||||||    
T  7723221 cgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 250  Q
    |||||| | ||||||| || ||| ||||||||| |||||||| |||||||||||||||||| | |||||| | | ||||||| |         |||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
Q  251 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
T  5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    |||||||||||| |||||||| || |||||| |||||| ||||||||| ||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  138 atgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||| |||||||| | ||||||| |||||| ||||||||| |||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 248  Q
    |||||| ||||||||| |||||| ||| ||||| |||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
Q  249 ggtgtcggaca 259  Q
    |||||||||||    
T  9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  160 ggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||||||||| ||||||| | ||| || || |||||  | |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| | || ||| ||||||||| |||||| ||| ||||| |||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||| ||||||||| |||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  173 atactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 25038180 - 25038106
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| ||||||||   | | ||| ||| ||||||||||||| ||||||| |||||||||||||||||    
T  25038180 ctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaat 25038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    |||||||||| | ||||||||  || ||||| |||||| ||||||||| |||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| || ||| ||||||||| |||||| ||||||||||||| ||||||    
T  7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| | ||||||| || ||||||||||||| |||||| ||||||||||||| |||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 10760919 - 10760876
Alignment:
Q  167 gcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||| |||||||||||||||| | |||||||||||||||||    
T  10760919 gcacggacactgacacgtcgacactgataataatttgagaaaat 10760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
Q  168 cacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| | ||||||| |||||||||||||||||||||||||||    
T  20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 248  Q
    |||||| | ||||||| |||||| ||||||| | | ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
Q  249 ggtgtc 254  Q
    ||||||    
T  34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||| ||||||||| |||||| | ||||||||||| ||||||    
T  426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
Q  250 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  170 cggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||| ||||||||| | |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  159 cggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||| ||||||||| ||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| | ||||||| ||||||  |||||||||||| ||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||| | ||||||| |||||| |||||||||||||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 235  Q
    ||||||||||||||||| ||| | ||||||| |||  | ||||||||| |||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  236 tcggtgtggtgt 247  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataat 200  Q
    |||||||||||| |||||||| ||||||||| | |||||||||||||  ||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    |||||| ||||||||||||| |||||| ||| | |||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||| || |||||| |||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 28412315 - 28412404
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtg 241  Q
    |||||| || |||||| |||||| ||| ||||||| |||||| ||||||||||| |||||| | ||| |||| | ||||||||||||||||    
T  28412315 acggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcac-ataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 1327977 - 1328033
Alignment:
Q  185 cgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 242  Q
    |||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327977 cgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaa 209  Q
    |||||||||||  |||||||| ||||||||| |||||| | ||||||| ||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
Q  135 actatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaa 208  Q
    ||||||||||||| |||| ||| | ||||| | |||||| ||||||||  ||||||||||||||||||||||||    
T  23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
Q  135 actatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaa 208  Q
    ||||||||||||| |||| ||| | ||||| | |||||| ||||||||  ||||||||||||||||||||||||    
T  24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  186 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 19574031 - 19574078
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||||||||   |||||||||||||||||| ||||||||||    
T  19574031 gtgtcggtgtcggacacacctaattcgaggagtgtccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 29970619 - 29970581
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatcgc 213  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  29970619 actgacacattgacaccgctaataatttgagaaaatcgc 29970581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  244 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||| |||||||||| ||| | |||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 39323246 - 39323288
Alignment:
Q  168 cacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||| |||||||||||||||||||||||| |||||    
T  39323246 cacggacactgaaacgtcgacaccgctaataatttgacaaaat 39323288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 18276486 - 18276570
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 236  Q
    |||||| |||||||||  || || ||||| | | ||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276486 acggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  137 tatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataattt 202  Q
    |||||||| || |||||||| ||| ||||| ||| || ||||||||| |||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 6736479 - 6736511
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaa 207  Q
    |||||||||||||||||| ||||||||||||||    
T  6736479 actgacacgtcgacaccggtaataatttgagaa 6736511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 22084910 - 22084866
Alignment:
Q  167 gcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| ||||| || |||||| ||||||||||||||||||    
T  22084910 gcacggatacggacacatcaacaccgttaataatttgagaaaatc 22084866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 255  Q
    ||||||||| |||||| ||||||||| |||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  256 gaca 259  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
Q  153 ggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 250  Q
    |||| ||||||||| |||||| ||||||||| |||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
Q  251 tgtcggaca 259  Q
    |||||||||    
T  29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    |||||||||||||||||||||  ||||||||  ||||| ||||||||| |||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  145 acgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||| |||||| ||||||||| |||||| ||||||||| | ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 34897068 - 34897110
Alignment:
Q  169 acggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatc 34897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| ||||||||| |||||| |||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    |||||||||||| ||||| || | |||||||  ||||||||||||||| | ||||||||||||||||||    
T  126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 2572150 - 2572090
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| | ||||||| ||||||||| |||||||||||||  |||||||||||| ||||||    
T  2572150 acggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatc 2572090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 29776013 - 29776108
Alignment:
Q  163 cacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||| |||||| | ||||| |||||||| |||||||||||||||||||| |  || |||| ||||||||| |||||||||   ||| ||||||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatcac-gtaattcagtataattatatgtcggtgttaagtcagtgtcggaca 29776108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| | | |||| ||||||| | || ||| ||||||||| |||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
Q  168 cacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||    
T  31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  149 atacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||| ||||| ||| ||| || || |||||| |||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 36934646 - 36934715
Alignment:
Q  162 acacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat 232  Q
    ||||| |||||| ||| ||||||||||||||||||||||| || |||||| | ||| |||||| |||||||    
T  36934646 acacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcac-ataattcattgtaattat 36934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
Q  178 gacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 20679465 - 20679429
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  20679465 actgacatgtcgacacccctaataatttgagaaaatc 20679429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 28642358 - 28642426
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    |||||||||||| ||||||||  |||||||| |||||| | |||||| | ||||| | |||||||||||    
T  28642358 ctatgaagcacggatacggacatcggacacgacacggacaatgacacattgacacggttaataatttga 28642426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 28745448 - 28745516
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    ||||||| |||| ||||| ||  |||||||| |||||||| ||| || ||||||| |||||||||||||    
T  28745448 ctatgaaacacggatacgaacgtcggacacgacacggataatgatacatcgacactgctaataatttga 28745516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
Q  171 ggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||| |||||| ||||||||||||||||||||    
T  31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 37283867 - 37283812
Alignment:
Q  188 caccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 244  Q
    ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283867 caccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

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Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  135 actatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||| ||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

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Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 291
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 233  Q
    |||||||||||  |||||||| ||||||||| |||||| | ||||||| |||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  234 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 291  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

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Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  135 actatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||| ||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  159 cggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
Q  152 cggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||| ||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  238 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  159 cggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||  |||||| ||||||||| |||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  144 cacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 241  Q
    |||| |||||||| ||||||||| || | | ||||||||| ||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  242 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 290  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  135 actatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||| ||||| |||| || |||||||||| |||||| ||| ||||| |||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||| ||||||| |||||||| ||||||||| |||||| |||||||||   |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 44482234 - 44482343
Alignment:
Q  190 ccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgt 282  Q
    ||||| |||||||||||||||| | ||| |||| | |||||||  |||||||||| |||||||||||||||| |     |||||| ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcac-ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgt 44482332  T
Q  283 gcttcatagtt 293  Q
    ||| |||||||    
T  44482333 gctccatagtt 44482343  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 20157437 - 20157384
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||  |||||||| ||||||||||||||||| ||||||||||    
T  20157437 ccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatc 20157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
Q  167 gcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||    
T  12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 250  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
T  1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 21057772 - 21057807
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||||||||||||||| |||||||    
T  21057772 actgacacgtcgacaccgctaataattttagaaaat 21057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 248  Q
    |||||| | ||||| | |||||| ||| ||||  |||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
T  38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
Q  249 ggt 251  Q
    |||    
T  38503384 ggt 38503386  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  149 atacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    |||||||| ||||||||| |||||| ||||||||| |||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 236  Q
    ||||||||| |||| | || |||||| |||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 2851004 - 2851045
Alignment:
Q  168 cacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  2851004 cacggatactgacacgtc-acaccgctaataatttgataaaat 2851045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||| ||||||| | | |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| |||||| ||||||||  ||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 38078771 - 38078695
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacgg--cacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| |||||||| | |||||| |  |||| | |||||||||||||||| ||||||||||||| ||||||    
T  38078771 ctatgaagcacggatacggacac-ggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatc 38078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||| |||||||| ||||||||| || ||||| |||||||  |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 19324518 - 19324587
Alignment:
Q  142 agcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||  ||||| |||||||| |||| |  ||||| |||||||||| ||| ||||||||||||||||    
T  19324518 agcacgaacgcggacaccggacacagcacaggcactgatacgtcgacactgctgataatttgagaaaatc 19324587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 16297369 - 16297317
Alignment:
Q  159 cggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||  |||||||||||||||||||||| || |||||| ||| ||||||    
T  16297369 cggacacgatacggatactgacacgtcgacacagcaaataatatgaaaaaatc 16297317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||| |||||| | |||||| | ||||||| |||||| | ||||||| |||||||||||||||||||||||||||    
T  8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
Q  149 atacggac-tccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 247  Q
    |||||||| |||||||||| ||| || ||||||||| || ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
T  5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  172 gatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 261  Q
    |||| ||||||| | ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||||| |||||| ||||||||| |||||| | |||||||||||||||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataattt 202  Q
    |||||||||||| |||||||| ||||| ||| |||||| | ||||| | ||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
Q  167 gcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat 232  Q
    |||||||||| |||||| |||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 3164119 - 3164059
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| | || ||||||||||| ||||||||||||| ||||||    
T  3164119 acggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatc 3164059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 6525750 - 6525714
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||| |||||||||||||||||||||||||||||    
T  6525750 actgacatgtcgacaccgctaataatttgagaaaatc 6525714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| ||||||||| |||||  ||||||||||||| ||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| ||| ||||| |||||| ||||||||  |||||||||||||| |||||||||||    
T  4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  145 acgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttga 204  Q
    ||||| |||||| ||||||||| |||||| ||||||||| ||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 13620837 - 13620798
Alignment:
Q  172 gatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  13620837 gatactgacatgtcgacaccgctagtaatttgagaaaatc 13620798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 235  Q
    ||||||| ||||  ||| ||| ||||||||| ||| || | ||||||| ||||||||||||| |||||| |||||| | ||| || | | ||||||||||    
T  25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
Q  236 tcggtgtggtgtcggtgtcggaca 259  Q
    | ||| | |||| |||||||||||    
T  25064958 ttggtatcgtgttggtgtcggaca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||  |||||||| ||||| ||| |||||| ||||| ||| ||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatagtt 293  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  160 ggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||| |||| | ||||||||| ||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 23870635 - 23870593
Alignment:
Q  169 acggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||| || ||||||||||||||||||||||||||| ||||||    
T  23870635 acggacacggacacgtcgacaccgctaataatttgaaaaaatc 23870593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  137 tatgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||| |||||||| ||||||||  |||| | | ||||||  ||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 15544682 - 15544742
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 236  Q
    |||||||||| ||||||||||||||||||| |||||| | ||| |||  |||||||||||||    
T  15544682 actgacacgttgacaccgctaataatttgataaaatcac-ataattctgtataattatgtgt 15544742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  159 cggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||| | |||| ||||||||| ||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| | ||||||| |||||| | ||||||||||| ||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  159 cggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||| |||||| ||||||||| |||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 291
Target Start/End: Original strand, 21002 - 21149
Alignment:
Q  145 acgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgt 242  Q
    ||||| |||||| || |||||| |||||| ||||||| |  ||||| | |||||||||||||||||| | |||  ||  |||||||||  |||||||| |    
T  21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
Q  243 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  230 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  230 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 8763 - 8823
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| ||||||||| |||||| ||||||||||||| ||||||    
T  8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 3281 - 3340
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||||| ||||||||||||||||||||||  ||||| ||||| |||||||    
T  3281 acggacaccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||| ||||||||| |||||| ||||||||| |||||| | |||||||||||||||||    
T  225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 241559 - 241668
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 248  Q
    |||||| ||||||||| |||||| ||||||||| |||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
Q  249 ggtgtcggaca 259  Q
    |||||||||||    
T  241658 ggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 20633450 - 20633508
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaa 209  Q
    |||||| || ||||||  ||||| |||||||||||||||||||||||||||||| ||||    
T  20633450 acggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||| |||||| | ||||||| |||||| ||||||||||||| ||||||    
T  23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 7670625 - 7670709
Alignment:
Q  130 catatactatgaagcacgaatacggactccggacacggcacggatactgacacgt---cgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||||||||||||||| |||  ||||||||| | |||| ||||||||||   |||||  ||||||| ||||||||||||    
T  7670625 catatagtatgaagcacgaatatggataccggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatc 7670709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  175 actgacacgtcgacaccgctaataatttgagaaaa 209  Q
    ||||||||| |||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 30982935 - 30982863
Alignment:
Q  188 caccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggaca 259  Q
    |||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| ||||||||||| ||||    
T  30982935 caccgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagaca 30982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 847918 - 847975
Alignment:
Q  153 ggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||| ||||||||| ||| || ||||||||| |||  |||||||||||||||||||||    
T  847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 5096164 - 5096131
Alignment:
Q  177 tgacacgtcgacaccgctaataatttgagaaaat 210  Q
    |||||||||||||||||||||||||||| |||||    
T  5096164 tgacacgtcgacaccgctaataatttgaaaaaat 5096131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 30838185 - 30838234
Alignment:
Q  161 gacacggcacggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||| |||||    
T  30838185 gacacggcacggacactgatacgtcgatactgctaataatttgataaaat 30838234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  158 ccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| | |||| ||||||||| | ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 5775469 - 5775392
Alignment:
Q  136 ctatgaagcacgaatacggactccggacacggcacgga---tactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||||||| |||| | ||||||| ||||||   |||||||||  |||||||  ||||||||||||||||||    
T  5775469 ctatgaagcacgaatatggacacaggacacgacacggacactactgacac-acgacaccattaataatttgagaaaatc 5775392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 5832760 - 5832728
Alignment:
Q  179 acacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||||||||| ||||||||||||||||||||    
T  5832760 acacgtcgacactgctaataatttgagaaaatc 5832728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  247 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  255 ggacatggctaattcgaggagtgtccgtgcttcatag 291  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  169 acggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||| ||||||||| ||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 8631 - 8729
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 248  Q
    |||||| ||||||||| || ||| ||||||||||||||||  ||||||||||  ||||||| | ||| |||| |||||||||  |||||||||| |||||    
T  8631 acggacaccggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcac-atagttcagtataattataagtgtcggtgtcgtgtc 8729  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 53170 - 53256
Alignment:
Q  176 ctgacacgtcgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 261  Q
    |||||||| ||| ||||| ||||||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
Q  139 tgaagcacgaatacggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||| |||  ||| ||||||||| |||||| ||||||||| ||||||  |||||||||||| ||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
Q  169 acggatactgacacgtcgacaccgctaataatttgagaaaat 210  Q
    ||||| ||||||||| |||||||| |||||||||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 26384 - 26418
Alignment:
Q  177 tgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    ||||||||||||||| |||||||||||||||||||    
T  26384 tgacacgtcgacaccactaataatttgagaaaatc 26418  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 556 - 496
Alignment:
Q  151 acggactccggacacggcacggatactgacacgtcgacaccgctaataatttgagaaaatc 211  Q
    |||||| ||| ||||| |||||| ||||| ||| |||||| ||||||||||||| ||||||    
T  556 acggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 291
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  263 ctaattcgaggagtgtccgtgcttcatag 291  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  245 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 293  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

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