View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10594_low_3 (Length: 299)
Name: NF10594_low_3
Description: NF10594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10594_low_3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 68 - 299
Target Start/End: Original strand, 39325345 - 39325576
Alignment:
| Q |
68 |
tgagtgttatttgtcattctcatacagtacgcctgtttgccaggttaattggagtgccattttccaattaagtgactaggtttccaaagctcgttacaaa |
167 |
Q |
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| T |
39325345 |
tgagtgttatttgtcattctcatacagtacgcctgtttgccaggttaattgaagtgccattttccaattaagtgactaggtttccaaagctcgttacaaa |
39325444 |
T |
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| Q |
168 |
ttcaacatttcaaatccccaagttttactgcaacctctcgtatgagttctatagaggttgagatatgatctaaaaatgtgtttataaataatgtatgttc |
267 |
Q |
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| T |
39325445 |
ttcaacatttcaaatccccaagttttactgcaacctctcgtatgagttctatagaggttgagatatgatctaaaaatatgtttataaatagtgtttgttc |
39325544 |
T |
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| Q |
268 |
tcgcctcaagagccgagttatgatctaaaaac |
299 |
Q |
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| T |
39325545 |
tcgcctcaagagccgatttatgatctaaaaac |
39325576 |
T |
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