View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10595_low_14 (Length: 215)
Name: NF10595_low_14
Description: NF10595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10595_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 9010141 - 9009935
Alignment:
| Q |
1 |
tgccaattcgtcattcaacagaaaacttgattgctcttgaaatgtgcagagcatcataagatcatatggtataatgaatttag----atagtacactaca |
96 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
9010141 |
tgccaattcgtgattcaacagaaaacttgattgctcttgaaatgtgcagagcatcataagatcatatggtataatgaatttagatatatagtacactaca |
9010042 |
T |
|
| Q |
97 |
cgcaaaataaatttgcagatagatttcatttgacaatcatgtgaatctaaag--atatgtgaatcattttcctcttgcacacttaagctgatttcaaact |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
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|
| T |
9010041 |
cgcaaaataaatttgcagatagatttcatttgacaatcatgtgaatctaaagatatatgtgaatcattttcctctttcacacttaagctgatttcaaact |
9009942 |
T |
|
| Q |
195 |
aagttat |
201 |
Q |
| |
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||||||| |
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|
| T |
9009941 |
aagttat |
9009935 |
T |
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