View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10595_low_5 (Length: 254)
Name: NF10595_low_5
Description: NF10595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10595_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 36589393 - 36589172
Alignment:
| Q |
18 |
ataatcgaatcaaccataggagtttgaagaattttattagaagcattaccgtcaacaatgtgatgaactaaagcttcactccatcttctctcattactca |
117 |
Q |
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| T |
36589393 |
ataatcgaatcaaacataggagttggaagaattttattagaagcattaccgtcaacaatgtgatgaactaaagcttcactccatcttctctcattactca |
36589294 |
T |
|
| Q |
118 |
tgaacaaatctgctactatcaagctctataaaactgggtccagatgacaaggtcgacatattgatgaaccatcaagcaaccaatcaccattccaaactga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||| | |
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| T |
36589293 |
tgaacaaatctgctactatcaagctctataaaactgggtccagacgaaaaggtcgacatattgatgaaccatcaagcaaccaatcaccattcc-aactaa |
36589195 |
T |
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| Q |
218 |
aatgttatgccctaagcctatgc |
240 |
Q |
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||||||||||||||||||||||| |
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| T |
36589194 |
aatgttatgccctaagcctatgc |
36589172 |
T |
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