View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10595_low_6 (Length: 250)
Name: NF10595_low_6
Description: NF10595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10595_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 49016068 - 49016309
Alignment:
| Q |
1 |
catgtttaaacaattgttgggaattttcctggaatcggtgcaagttaaggctaaggtatgttgattttattttttctgaagctttatttttggcagaata |
100 |
Q |
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| T |
49016068 |
catgtttaaacaattgttgggaattttcctggaatcggtgcaagttaaggctaaggtatgttgattttattttttctgaagctttatttttggcagaata |
49016167 |
T |
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| Q |
101 |
agctaggaggcatcaagagtgacttcatagttcatccaattctgcaaagattagcccataaggtccttgtattctagagttgaaataataaattaaataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
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| T |
49016168 |
agctaggaggcatcaagagtgacttcatagttcatccaattctgcaaagattagcccataaggtccttgtattctagagttgaactaataaattaaatga |
49016267 |
T |
|
| Q |
201 |
agagtgctacaaacatactctctaacacactctccctttgct |
242 |
Q |
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||||||||||||||||||||||||||||||||||| |||||| |
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| T |
49016268 |
agagtgctacaaacatactctctaacacactctccttttgct |
49016309 |
T |
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