View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10595_low_8 (Length: 245)
Name: NF10595_low_8
Description: NF10595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10595_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37216222 - 37216446
Alignment:
| Q |
1 |
atcacaattaaccgataaataagaactactagaagataattgaacccctgttaccttcagccttagatgaatcataaacgactttcaacattttccctct |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
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| T |
37216222 |
atcacaattaaccgataaataagaactactagaagataattgaacccctgttaccttcagccttaggtgaatcataaacgactttcaacatgttccctct |
37216321 |
T |
|
| Q |
101 |
acttctctttaatgttttaaacataacttttatatccttactcgagagtcgcattattttccgtagaccattgaatggaattttctcgtgcctaccatga |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
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| T |
37216322 |
acttctctttaatgttttaaacataacttttatatccttactcgagagtcgcattattttccgtagaccattgagtggagttttctcgtgcctaccatga |
37216421 |
T |
|
| Q |
201 |
tccttcttggttgtacaaacaccac |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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| T |
37216422 |
tccttcttggttgtacaaacaccac |
37216446 |
T |
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