View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10596_high_22 (Length: 229)
Name: NF10596_high_22
Description: NF10596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10596_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 26455089 - 26454876
Alignment:
| Q |
1 |
attttttaacacctacattaatgcaagaaaaaatcatcataatatgaagtggtgcaacaactttctaaatcaaacacaagtacctccacccaactagcat |
100 |
Q |
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| T |
26455089 |
attttttaacacctacattaatgcaagaaaaaatcatcataatatgaagtggtgcaacaactttctaaatcaaacacaagtacctccacccaactagcat |
26454990 |
T |
|
| Q |
101 |
taaaggaaaccctttaagttagatgagattatgggcaagttcatgaaatccacacaaaacaatcttaaggagctgaaggtgagccaagaaacaactcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26454989 |
taaaggaaaccctttaagttagatgagattatgggcaagttcatgaaatccacacaaaacaatcttaaggagctgaaggtgagccaagaaacaactcaaa |
26454890 |
T |
|
| Q |
201 |
cgaacaaagaagct |
214 |
Q |
| |
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||||||||||||| |
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| T |
26454889 |
agaacaaagaagct |
26454876 |
T |
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