View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10596_low_10 (Length: 298)
Name: NF10596_low_10
Description: NF10596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10596_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 12 - 283
Target Start/End: Complemental strand, 14898043 - 14897761
Alignment:
| Q |
12 |
aagaatcctcgatgttgttatccggatcgaaagattagtgtttcgttcactaatagtaactagaaagccacgattaatgttatgagaaagcttgcatggg |
111 |
Q |
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| T |
14898043 |
aagaatcctcgatgttgttatccgtatcgaaagattagtgtttcgttcaccaatagtaactagaaagccacgattaatgttatgagaaagcttgcatggg |
14897944 |
T |
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| Q |
112 |
ttgaaagaattcagcagtaataatttggcggttctttatataaaccaatcattttattcaagaatgaaattaaacattgt-----------gccatttag |
200 |
Q |
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| T |
14897943 |
ttgaaagaattcagcagtaataatttggcggttctttatataaaccaatcattttattcaagaatgaaattaaacattatgaactggcatggctttttag |
14897844 |
T |
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| Q |
201 |
ttgctatttagtacctgaaatcaactaaaagtaagaaatatgaaagtaaaacaaagtccgggacagagaaagacaaccaatat |
283 |
Q |
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| T |
14897843 |
ttgctatttaatacttgaaatcaactaaaagtaagaaatatgaaagtaaaacaaagtccgggacagagaaagacaaccaatat |
14897761 |
T |
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