View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10596_low_6 (Length: 365)

Name: NF10596_low_6
Description: NF10596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10596_low_6
NF10596_low_6
[»] chr8 (45 HSPs)
chr8 (6-347)||(33020953-33021295)
chr8 (16-88)||(31035322-31035391)
chr8 (16-93)||(31578339-31578414)
chr8 (16-89)||(6376192-6376262)
chr8 (23-93)||(31573794-31573862)
chr8 (139-242)||(17847571-17847672)
chr8 (258-324)||(33839243-33839308)
chr8 (16-88)||(16833753-16833823)
chr8 (41-93)||(33839006-33839058)
chr8 (16-72)||(15956177-15956231)
chr8 (15-71)||(21482531-21482585)
chr8 (134-237)||(28895399-28895501)
chr8 (56-88)||(3276395-3276427)
chr8 (56-88)||(9021206-9021238)
chr8 (44-88)||(17847730-17847773)
chr8 (16-71)||(21480723-21480776)
chr8 (134-174)||(33032613-33032653)
chr8 (56-88)||(33032705-33032737)
chr8 (53-88)||(2267119-2267154)
chr8 (50-93)||(13985172-13985214)
chr8 (134-242)||(590686-590793)
chr8 (16-93)||(31162409-31162483)
chr8 (16-72)||(2468191-2468245)
chr8 (18-93)||(3896020-3896094)
chr8 (16-72)||(5372239-5372293)
chr8 (134-237)||(9021290-9021392)
chr8 (134-237)||(23179744-23179846)
chr8 (59-88)||(28890816-28890845)
chr8 (59-88)||(28895553-28895582)
chr8 (16-72)||(36865755-36865809)
chr8 (20-74)||(181720-181771)
chr8 (60-88)||(590845-590873)
chr8 (60-88)||(4812590-4812618)
chr8 (60-88)||(16752625-16752653)
chr8 (60-88)||(16757370-16757398)
chr8 (134-174)||(17799607-17799647)
chr8 (134-174)||(21033829-21033869)
chr8 (56-84)||(23179660-23179688)
chr8 (60-88)||(25684694-25684722)
chr8 (56-88)||(26268331-26268363)
chr8 (134-174)||(26268413-26268453)
chr8 (60-88)||(28327959-28327987)
chr8 (60-88)||(28332682-28332710)
chr8 (134-174)||(29554968-29555008)
chr8 (134-210)||(30423136-30423211)
[»] chr3 (60 HSPs)
chr3 (3-194)||(42297708-42297899)
chr3 (20-93)||(14634505-14634576)
chr3 (15-84)||(27420784-27420849)
chr3 (38-224)||(46966729-46966920)
chr3 (16-93)||(1620521-1620595)
chr3 (16-93)||(36871361-36871435)
chr3 (38-87)||(15823729-15823778)
chr3 (139-237)||(26762936-26763032)
chr3 (15-74)||(17795400-17795457)
chr3 (15-74)||(19103840-19103897)
chr3 (134-237)||(27703353-27703455)
chr3 (134-174)||(27762169-27762209)
chr3 (16-72)||(32264097-32264152)
chr3 (17-74)||(25635523-25635578)
chr3 (134-237)||(5858443-5858545)
chr3 (134-237)||(47878354-47878456)
chr3 (56-88)||(4535665-4535697)
chr3 (56-88)||(5858595-5858627)
chr3 (56-88)||(10897056-10897088)
chr3 (56-88)||(11079568-11079600)
chr3 (134-235)||(15823793-15823892)
chr3 (56-88)||(27762085-27762117)
chr3 (56-88)||(29914052-29914084)
chr3 (16-83)||(31021221-31021286)
chr3 (134-174)||(38002828-38002868)
chr3 (56-88)||(47878270-47878302)
chr3 (56-88)||(47882981-47883013)
chr3 (56-88)||(48390401-48390433)
chr3 (21-88)||(53973744-53973809)
chr3 (56-88)||(54188560-54188592)
chr3 (56-88)||(54193277-54193309)
chr3 (16-66)||(3306911-3306959)
chr3 (57-88)||(3329944-3329975)
chr3 (20-66)||(6484510-6484554)
chr3 (46-93)||(7768694-7768741)
chr3 (53-84)||(13893517-13893548)
chr3 (16-66)||(28761488-28761536)
chr3 (16-93)||(561836-561910)
chr3 (183-224)||(1618882-1618924)
chr3 (134-237)||(10612961-10613063)
chr3 (134-237)||(10896902-10897004)
chr3 (56-85)||(10949359-10949388)
chr3 (16-72)||(24181524-24181578)
chr3 (16-72)||(25634031-25634085)
chr3 (16-72)||(53468515-53468569)
chr3 (16-72)||(53597380-53597434)
chr3 (20-72)||(53917727-53917777)
chr3 (60-88)||(10094177-10094205)
chr3 (60-88)||(10201057-10201085)
chr3 (60-88)||(10208103-10208131)
chr3 (56-88)||(10595133-10595165)
chr3 (56-88)||(10612877-10612909)
chr3 (269-313)||(15823929-15823973)
chr3 (134-174)||(20031501-20031541)
chr3 (16-74)||(23633596-23633651)
chr3 (41-93)||(23941887-23941939)
chr3 (15-88)||(26763091-26763164)
chr3 (60-88)||(27544324-27544352)
chr3 (134-174)||(29914136-29914176)
chr3 (56-88)||(38002920-38002952)
[»] chr4 (60 HSPs)
chr4 (16-242)||(3982238-3982467)
chr4 (134-242)||(26557631-26557737)
chr4 (16-93)||(31983589-31983664)
chr4 (16-87)||(25357844-25357913)
chr4 (16-93)||(47150955-47151030)
chr4 (16-93)||(16185897-16185971)
chr4 (16-93)||(12102284-12102359)
chr4 (38-88)||(54906791-54906841)
chr4 (49-88)||(2880979-2881018)
chr4 (20-93)||(9863904-9863974)
chr4 (139-235)||(32274090-32274184)
chr4 (16-93)||(40999011-40999086)
chr4 (16-88)||(28453885-28453954)
chr4 (262-329)||(47151210-47151277)
chr4 (16-85)||(9022509-9022577)
chr4 (56-93)||(13072080-13072117)
chr4 (134-237)||(15312213-15312315)
chr4 (16-72)||(18537536-18537590)
chr4 (16-72)||(38890287-38890341)
chr4 (16-84)||(54928710-54928776)
chr4 (56-88)||(4556158-4556190)
chr4 (56-88)||(4558362-4558394)
chr4 (56-88)||(4570145-4570177)
chr4 (56-88)||(7050356-7050388)
chr4 (56-88)||(15312367-15312399)
chr4 (56-88)||(16489400-16489432)
chr4 (56-88)||(16689039-16689071)
chr4 (19-88)||(23001468-23001533)
chr4 (56-88)||(31300475-31300507)
chr4 (56-88)||(36771447-36771479)
chr4 (134-209)||(16638752-16638826)
chr4 (53-88)||(16638878-16638913)
chr4 (20-94)||(41997689-41997760)
chr4 (38-88)||(5336863-5336913)
chr4 (58-88)||(25699800-25699830)
chr4 (134-190)||(36771342-36771395)
chr4 (16-75)||(3578733-3578789)
chr4 (268-313)||(3759945-3759990)
chr4 (20-72)||(13544177-13544227)
chr4 (18-66)||(15032612-15032658)
chr4 (16-72)||(16453527-16453581)
chr4 (134-237)||(18586863-18586965)
chr4 (16-72)||(19322911-19322965)
chr4 (134-237)||(31300321-31300423)
chr4 (20-72)||(33415553-33415603)
chr4 (16-72)||(37313127-37313181)
chr4 (20-72)||(47274944-47274994)
chr4 (60-88)||(8529318-8529346)
chr4 (38-93)||(10113066-10113122)
chr4 (134-174)||(11853508-11853548)
chr4 (60-88)||(11853600-11853628)
chr4 (56-88)||(15317009-15317041)
chr4 (134-174)||(15831100-15831140)
chr4 (60-88)||(15831192-15831220)
chr4 (134-174)||(16489308-16489348)
chr4 (134-174)||(25699708-25699748)
chr4 (40-88)||(29609553-29609601)
chr4 (56-84)||(36769534-36769562)
chr4 (40-88)||(38208765-38208813)
chr4 (60-88)||(55822316-55822344)
[»] chr5 (43 HSPs)
chr5 (16-94)||(15143608-15143684)
chr5 (16-93)||(15445328-15445403)
chr5 (16-88)||(17413228-17413298)
chr5 (16-93)||(4897872-4897947)
chr5 (16-93)||(36208719-36208794)
chr5 (41-93)||(13295883-13295935)
chr5 (16-93)||(35430323-35430398)
chr5 (134-224)||(26406656-26406745)
chr5 (41-93)||(32520582-32520634)
chr5 (53-88)||(10627415-10627450)
chr5 (264-311)||(13295656-13295703)
chr5 (16-74)||(40221684-40221740)
chr5 (56-93)||(1240474-1240511)
chr5 (134-237)||(22672731-22672833)
chr5 (134-237)||(40222660-40222762)
chr5 (16-85)||(2144624-2144691)
chr5 (56-88)||(11962532-11962564)
chr5 (56-88)||(17841348-17841380)
chr5 (16-79)||(20045197-20045258)
chr5 (56-88)||(22672885-22672917)
chr5 (56-88)||(42238311-42238343)
chr5 (16-74)||(9020380-9020436)
chr5 (53-88)||(31782553-31782588)
chr5 (38-93)||(34477133-34477188)
chr5 (38-93)||(34479498-34479553)
chr5 (134-176)||(17841432-17841474)
chr5 (16-72)||(696041-696095)
chr5 (141-174)||(11962623-11962656)
chr5 (20-72)||(17818555-17818605)
chr5 (20-72)||(18511277-18511327)
chr5 (59-88)||(25445547-25445576)
chr5 (59-88)||(25452546-25452575)
chr5 (134-171)||(25838069-25838106)
chr5 (134-237)||(35385635-35385737)
chr5 (60-88)||(1170862-1170890)
chr5 (134-174)||(1240387-1240427)
chr5 (60-88)||(2298104-2298132)
chr5 (56-88)||(16093390-16093422)
chr5 (134-166)||(25562474-25562506)
chr5 (18-104)||(34033630-34033715)
chr5 (60-88)||(35385555-35385583)
chr5 (56-88)||(40222814-40222846)
chr5 (139-237)||(42238200-42238297)
[»] chr6 (56 HSPs)
chr6 (16-93)||(30445702-30445777)
chr6 (182-345)||(7293720-7293890)
chr6 (18-88)||(25078621-25078689)
chr6 (16-87)||(19696624-19696693)
chr6 (16-88)||(20526989-20527058)
chr6 (16-85)||(28078257-28078323)
chr6 (16-93)||(12186133-12186208)
chr6 (16-88)||(12937255-12937324)
chr6 (16-93)||(26945322-26945397)
chr6 (20-93)||(28037795-28037866)
chr6 (16-87)||(3833460-3833530)
chr6 (38-87)||(7542463-7542512)
chr6 (139-224)||(24542862-24542945)
chr6 (16-88)||(22858015-22858085)
chr6 (16-88)||(12911508-12911577)
chr6 (23-93)||(6843311-6843377)
chr6 (16-72)||(15719841-15719895)
chr6 (134-237)||(17695034-17695136)
chr6 (134-237)||(25466082-25466184)
chr6 (56-88)||(3577588-3577620)
chr6 (56-88)||(13467563-13467595)
chr6 (56-88)||(17694950-17694982)
chr6 (56-88)||(25465998-25466030)
chr6 (18-72)||(3390578-3390630)
chr6 (53-88)||(5165911-5165946)
chr6 (57-88)||(12166246-12166277)
chr6 (16-74)||(13039951-13040007)
chr6 (16-66)||(16455487-16455535)
chr6 (16-74)||(24338508-24338564)
chr6 (56-87)||(33215879-33215910)
chr6 (41-87)||(17904433-17904479)
chr6 (16-72)||(25465653-25465706)
chr6 (16-72)||(1069780-1069834)
chr6 (134-237)||(3577697-3577799)
chr6 (16-72)||(3631999-3632053)
chr6 (59-88)||(4641007-4641036)
chr6 (20-72)||(9020125-9020175)
chr6 (16-72)||(13057393-13057447)
chr6 (20-72)||(15532746-15532796)
chr6 (56-93)||(22342900-22342937)
chr6 (56-93)||(22351951-22351988)
chr6 (38-87)||(24542754-24542802)
chr6 (59-88)||(25941720-25941749)
chr6 (16-72)||(32280195-32280249)
chr6 (134-174)||(13467646-13467686)
chr6 (60-88)||(13878778-13878806)
chr6 (60-88)||(13883526-13883554)
chr6 (60-88)||(16785970-16785998)
chr6 (134-174)||(17036014-17036054)
chr6 (56-88)||(19701961-19701993)
chr6 (134-174)||(22342984-22343024)
chr6 (134-237)||(25941542-25941643)
chr6 (60-88)||(26887327-26887355)
chr6 (60-88)||(31248817-31248845)
chr6 (139-237)||(33215724-33215821)
chr6 (60-88)||(35201429-35201457)
[»] chr1 (48 HSPs)
chr1 (16-93)||(13125521-13125596)
chr1 (16-93)||(30790464-30790539)
chr1 (18-93)||(16561610-16561683)
chr1 (20-94)||(30738697-30738769)
chr1 (38-93)||(46783191-46783246)
chr1 (16-93)||(26613303-26613378)
chr1 (264-320)||(26332877-26332933)
chr1 (16-93)||(43104303-43104379)
chr1 (16-87)||(155856-155924)
chr1 (264-325)||(13125779-13125839)
chr1 (16-88)||(28279414-28279484)
chr1 (41-93)||(13785355-13785407)
chr1 (259-345)||(31047826-31047914)
chr1 (3-93)||(14353111-14353195)
chr1 (16-72)||(49495274-49495328)
chr1 (39-84)||(49959202-49959246)
chr1 (56-88)||(2401320-2401352)
chr1 (134-174)||(2401404-2401444)
chr1 (18-88)||(10115926-10115993)
chr1 (56-88)||(21353445-21353477)
chr1 (56-88)||(25134122-25134154)
chr1 (18-72)||(3579681-3579733)
chr1 (16-74)||(14183655-14183711)
chr1 (16-74)||(16429119-16429175)
chr1 (18-72)||(42922394-42922446)
chr1 (15-72)||(17186190-17186245)
chr1 (16-85)||(27916646-27916714)
chr1 (134-171)||(3091289-3091326)
chr1 (16-66)||(4131439-4131491)
chr1 (134-171)||(4144866-4144903)
chr1 (16-72)||(6756690-6756744)
chr1 (265-306)||(8213835-8213876)
chr1 (16-72)||(8347336-8347390)
chr1 (16-72)||(9241149-9241203)
chr1 (134-237)||(9526363-9526465)
chr1 (20-72)||(11457542-11457592)
chr1 (16-72)||(18839751-18839805)
chr1 (135-242)||(20566853-20566956)
chr1 (16-72)||(40134108-40134162)
chr1 (16-72)||(50078884-50078938)
chr1 (60-88)||(2232648-2232676)
chr1 (56-88)||(2393381-2393413)
chr1 (56-88)||(4144782-4144814)
chr1 (60-88)||(9521766-9521794)
chr1 (60-88)||(9526517-9526545)
chr1 (134-174)||(21353529-21353569)
chr1 (262-294)||(25127793-25127825)
chr1 (50-94)||(37990820-37990864)
[»] chr2 (52 HSPs)
chr2 (134-242)||(33603887-33603993)
chr2 (19-93)||(15694023-15694095)
chr2 (16-93)||(40699493-40699568)
chr2 (134-233)||(30261956-30262053)
chr2 (41-93)||(30720695-30720747)
chr2 (16-93)||(13828404-13828479)
chr2 (16-93)||(20589810-20589885)
chr2 (16-72)||(17897307-17897361)
chr2 (53-93)||(28458924-28458964)
chr2 (16-86)||(33604048-33604115)
chr2 (16-93)||(41303095-41303168)
chr2 (16-72)||(6264210-6264264)
chr2 (16-72)||(20146670-20146724)
chr2 (25-93)||(27136195-27136261)
chr2 (264-313)||(27248228-27248276)
chr2 (134-237)||(27517822-27517924)
chr2 (134-237)||(30478891-30478993)
chr2 (17-93)||(31732839-31732912)
chr2 (134-237)||(35894444-35894546)
chr2 (134-174)||(12781404-12781444)
chr2 (56-88)||(17932685-17932717)
chr2 (56-88)||(20054864-20054896)
chr2 (56-88)||(27517738-27517770)
chr2 (46-93)||(30261860-30261907)
chr2 (16-93)||(6258878-6258952)
chr2 (38-83)||(28568453-28568499)
chr2 (258-347)||(30720934-30721025)
chr2 (41-87)||(41304531-41304577)
chr2 (16-88)||(43139499-43139568)
chr2 (48-93)||(17921818-17921863)
chr2 (134-237)||(17932531-17932633)
chr2 (16-72)||(18800375-18800429)
chr2 (134-237)||(22712699-22712801)
chr2 (16-72)||(22874270-22874324)
chr2 (16-72)||(28459251-28459305)
chr2 (134-237)||(33674588-33674690)
chr2 (17-87)||(43482918-43482984)
chr2 (60-88)||(2736256-2736284)
chr2 (60-88)||(17462487-17462515)
chr2 (134-174)||(17943496-17943536)
chr2 (56-88)||(17943588-17943620)
chr2 (56-84)||(20050121-20050149)
chr2 (41-93)||(26345725-26345777)
chr2 (60-88)||(30479045-30479073)
chr2 (60-88)||(33671070-33671098)
chr2 (56-88)||(37170851-37170883)
chr2 (134-174)||(38190956-38190996)
chr2 (56-88)||(38191048-38191080)
chr2 (60-88)||(39687034-39687062)
chr2 (16-93)||(40032115-40032193)
chr2 (60-88)||(45567460-45567488)
chr2 (60-88)||(45679774-45679802)
[»] chr7 (47 HSPs)
chr7 (16-93)||(6046647-6046721)
chr7 (16-88)||(6332378-6332448)
chr7 (16-88)||(13290536-13290605)
chr7 (16-93)||(31435108-31435182)
chr7 (16-87)||(6049030-6049098)
chr7 (51-88)||(26210700-26210737)
chr7 (22-94)||(11081659-11081731)
chr7 (16-93)||(16297084-16297160)
chr7 (16-66)||(13099536-13099585)
chr7 (133-237)||(34547045-34547148)
chr7 (38-87)||(6067281-6067330)
chr7 (16-72)||(20137170-20137224)
chr7 (16-72)||(22393896-22393950)
chr7 (16-72)||(26295621-26295675)
chr7 (48-85)||(40281468-40281505)
chr7 (56-88)||(2120950-2120982)
chr7 (134-174)||(25351312-25351352)
chr7 (56-88)||(25351404-25351436)
chr7 (134-174)||(25357006-25357046)
chr7 (56-88)||(25357098-25357130)
chr7 (56-88)||(25410181-25410213)
chr7 (56-88)||(44512624-44512656)
chr7 (57-88)||(7392851-7392882)
chr7 (265-324)||(8260396-8260454)
chr7 (49-104)||(8260621-8260676)
chr7 (16-72)||(22251607-22251665)
chr7 (17-66)||(24258643-24258690)
chr7 (56-86)||(44143965-44143995)
chr7 (262-303)||(6348747-6348788)
chr7 (134-237)||(8378687-8378789)
chr7 (20-72)||(9679233-9679283)
chr7 (20-72)||(20091610-20091660)
chr7 (16-72)||(24748768-24748822)
chr7 (16-72)||(25276315-25276369)
chr7 (16-72)||(27832694-27832748)
chr7 (142-174)||(1099725-1099757)
chr7 (60-88)||(3320153-3320181)
chr7 (60-88)||(3324901-3324929)
chr7 (60-88)||(7069831-7069859)
chr7 (60-88)||(7074838-7074866)
chr7 (60-88)||(8378607-8378635)
chr7 (60-88)||(25405444-25405472)
chr7 (134-174)||(25410089-25410129)
chr7 (56-88)||(30247021-30247053)
chr7 (16-72)||(37412187-37412242)
chr7 (56-88)||(42006714-42006746)
chr7 (56-92)||(44010849-44010885)
[»] scaffold0008 (1 HSPs)
scaffold0008 (23-85)||(57497-57557)
[»] scaffold0057 (1 HSPs)
scaffold0057 (16-72)||(16712-16766)
[»] scaffold0004 (2 HSPs)
scaffold0004 (134-237)||(188425-188527)
scaffold0004 (56-88)||(188341-188373)
[»] scaffold0474 (1 HSPs)
scaffold0474 (21-93)||(10754-10822)
[»] scaffold0468 (1 HSPs)
scaffold0468 (16-66)||(1704-1752)
[»] scaffold0224 (1 HSPs)
scaffold0224 (18-72)||(15885-15937)
[»] scaffold0477 (1 HSPs)
scaffold0477 (59-88)||(7079-7108)
[»] scaffold0339 (1 HSPs)
scaffold0339 (20-72)||(4169-4219)
[»] scaffold0131 (1 HSPs)
scaffold0131 (20-72)||(15192-15242)
[»] scaffold0045 (1 HSPs)
scaffold0045 (16-72)||(85403-85457)
[»] scaffold0256 (1 HSPs)
scaffold0256 (134-174)||(16284-16324)
[»] scaffold0209 (1 HSPs)
scaffold0209 (60-88)||(17089-17117)
[»] scaffold0133 (1 HSPs)
scaffold0133 (16-72)||(4983-5038)
[»] scaffold0006 (1 HSPs)
scaffold0006 (60-88)||(224870-224898)


Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 6 - 347
Target Start/End: Original strand, 33020953 - 33021295
Alignment:
Q  6 ttcgttcacttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaagccagaatcta 105  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  33020953 ttcgttcacttataatgatgagtaactttacaacaaaaa-atatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaatcccgaatcta 33021051  T
Q  106 tttccatgcccaaagaatctatcctaactgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacctagt 205  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33021052 tttccatgcctaaagaatctatcctaattgttcaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacctagt 33021151  T
Q  206 ttgttgtttgtttctaaacaatgtttttctaccctctctttttcatctttttgatctata-tttatagagaaataaaacccttaaaatttacaacaaatc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33021152 ttgttgtttgtttctaaacaatgtttttctaccctctctttttcatctttttgatctatattttatagagaaataaaacccttaaaatttacaacaaatc 33021251  T
Q  305 tcacgctgagaaatacg-tttattttctccttcaacgcaaaaat 347  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  33021252 tcacgctgagaaatacgttttattttctccttcagcgcaaaaat 33021295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 31035391 - 31035322
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||| |||||||||||||||||||||    
T  31035391 tataatgatgagtaactttacaa---agagatatcaaagggttacaagaataagtcttcaaacctaattctac 31035322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 31578339 - 31578414
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || |||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  31578339 tataatgatgagtaactttacaa--aagagatatcaaaaggttacaagaattagtcttcaaacctaattctacccaaa 31578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 6376262 - 6376192
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctaca 89  Q
    |||||||||||||||||||||||   | |||||||||| ||| |||||||| ||||||||||||||||||||||    
T  6376262 tataatgatgagtaactttacaa---agagatatcaaaaggtaacaagaattagtcttcaaacctaattctaca 6376192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 31573794 - 31573862
Alignment:
Q  23 atgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||  || |||||||||||  |||||||||| ||||||||||||||||||||| ||||    
T  31573794 atgagtaactttacaa--aagagatatcaaagaattacaagaattagtcttcaaacctaattctacccaaa 31573862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 17847672 - 17847571
Alignment:
Q  139 aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacct-agtttgttgtttgtttctaaacaatgtttttctac 237  Q
    ||||||||||||||||||| ||| | |||||||   ||||||  |||||||||| ||||||||| |||||||||||  |||||||||  |||||||||||    
T  17847672 aaggtgaatcaaaacaatcccaaccatagtgtt---tgttgcctagagaaatctctataaaccttagtttgttgttcatttctaaaccttgtttttctac 17847576  T
Q  238 cctct 242  Q
     ||||    
T  17847575 tctct 17847571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 33839243 - 33839308
Alignment:
Q  258 gatctatatttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatacgttt 324  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||||||||| ||||| ||||||||||    
T  33839243 gatctgtatttatagagaaataaaaccctcaaaatttggaacaaatctcatgctga-aaatacgttt 33839308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 16833823 - 16833753
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||| |||||||||||||||  || |||||||||| | |||||||| | |||||||||||||||||||||    
T  16833823 tataatgttgagtaactttacaa--aagagatatcaaatgattacaagagtaagtcttcaaacctaattctac 16833753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 33839006 - 33839058
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||| ||||    
T  33839006 aaaagattccaaagggttacaagaattagtcttcaaacctaattctacccaaa 33839058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 15956231 - 15956177
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  15956231 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 15956177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 21482585 - 21482531
Alignment:
Q  15 ttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtc 71  Q
    |||||||||||||||||||||||  ||| ||||||||| ||||||||||||| ||||    
T  21482585 ttataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtc 21482531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 28895501 - 28895399
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||||||| ||||| |    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  28895501 tgttcaaggtgaatcaaaacaatctcaaccctagag----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtt 28895406  T
Q  231 tttctac 237  Q
    |||||||    
T  28895405 tttctac 28895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 3276427 - 3276395
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  3276427 gttacaagaatcagtcttcaaacctaattctac 3276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 9021206 - 9021238
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  9021206 gttacaagaatcagtcttcaaacctaattctac 9021238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 17847773 - 17847730
Alignment:
Q  44 agatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  17847773 agatatcaaagg-ttacaagaattagtcttcaaacctaattctac 17847730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 21480776 - 21480723
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtc 71  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| ||||    
T  21480776 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtc 21480723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 33032653 - 33032613
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  33032653 tgttcaaggtgaatcaaaacaatctcaaccctagtgttgtt 33032613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 33032737 - 33032705
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  33032737 gttacaagaatcagtcttcaaacctaattctac 33032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 2267119 - 2267154
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||| |||||||||||||||||||||    
T  2267119 agggttacaagaattagtcttcaaacctaattctac 2267154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 13985172 - 13985214
Alignment:
Q  50 caaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  13985172 caaagggttacaagaatcagt-ttcaaacctaattctacccaaa 13985214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 590793 - 590686
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| || ||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  590793 tgttcaaggtgaatcaaaacaatcccaacccaagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 590698  T
Q  231 tttctaccctct 242  Q
    ||||||| ||||    
T  590697 tttctacactct 590686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 31162483 - 31162409
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||| |||||||  || ||||||||| | ||||||||||| |||||||  |||||||||||| ||||    
T  31162483 tataatgatgagtaattttacaa--aagagatatcaatgagttacaagaataagtcttc-cacctaattctacccaaa 31162409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 2468191 - 2468245
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||| ||||||||| |||||    
T  2468191 tataatgatgagtaactttaca--aaagagatatcaatgggctacaagaataagtct 2468245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 3896094 - 3896020
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatca-aagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||  ||| |||||||| ||| ||||||||||| | | ||||||||||||| ||| ||||    
T  3896094 taatgatgagtaactttaca--aaagagatatcataagagttacaagaattaattttcaaacctaattatactcaaa 3896020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 5372239 - 5372293
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  |||||||||||| | ||||||||||| |||||    
T  5372239 tataatgatgagtaaccttacaa--aaaagatatcaatgagttacaagaataagtct 5372293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 9021290 - 9021392
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| |||||||||||||||||||  || |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  9021290 tgttcaaggtgaatcaaaacaatccgaaccctagtg----ttgttgcaaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 9021385  T
Q  231 tttctac 237  Q
    |||||||    
T  9021386 tttctac 9021392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 23179744 - 23179846
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| | ||||||||  ||||    
T  23179744 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtt 23179839  T
Q  231 tttctac 237  Q
    |||||||    
T  23179840 tttctac 23179846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 28890845 - 28890816
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  28890845 acaagaatcagtcttcaaacctaattctac 28890816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 28895582 - 28895553
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  28895582 acaagaatcagtcttcaaacctaattctac 28895553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 36865809 - 36865755
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| |||||| || ||||||||||||| |||||    
T  36865809 tataatgatgagtaactttaca--aaagagatattaatgggttacaagaataagtct 36865755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 181771 - 181720
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||||||   | ||||||||| ||||||||||||| |||||||    
T  181771 atgatgagtaactttacaa---agagatatcaatgggttacaagaataagtcttc 181720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 590873 - 590845
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  590873 caagaatcagtcttcaaacctaattctac 590845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 4812590 - 4812618
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  4812590 caagaatcagtcttcaaacctaattctac 4812618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 16752625 - 16752653
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  16752625 caagaatcagtcttcaaacctaattctac 16752653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 16757370 - 16757398
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  16757370 caagaatcagtcttcaaacctaattctac 16757398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 17799607 - 17799647
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  17799607 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 17799647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 21033869 - 21033829
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  21033869 tgttcaaggtgaatcaaaacaatcccaagcctagtgttgtt 21033829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 23179660 - 23179688
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaatt 84  Q
    |||||||||||||||||||||||||||||    
T  23179660 gttacaagaatcagtcttcaaacctaatt 23179688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 25684722 - 25684694
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  25684722 caagaatcagtcttcaaacctaattctac 25684694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 26268331 - 26268363
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||| ||||||||||    
T  26268331 gttacaagaatcagtcttcaaatctaattctac 26268363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 26268413 - 26268453
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| |||||||||||||||||||||||  |||||||||||    
T  26268413 tgttcaaggtgaatcaaaacaatctcaactctagtgttgtt 26268453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 28327987 - 28327959
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  28327987 caagaatcagtcttcaaacctaattctac 28327959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 28332710 - 28332682
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  28332710 caagaatcagtcttcaaacctaattctac 28332682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 29554968 - 29555008
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  29554968 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 29555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 30423211 - 30423136
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgtt 210  Q
    |||| ||||||||||||||||||||||  |||||   |||||||||| |||||||| ||| |||||| |||||||||||    
T  30423211 tgttcaaggtgaatcaaaacaatctcagccctag---tgtttgttgccaagagaaattctctataaaccctagtttgtt 30423136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 3 - 194
Target Start/End: Original strand, 42297708 - 42297899
Alignment:
Q  3 ctcttcgttcacttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaagccagaat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  42297708 ctcttcgttcacttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaatcccgaat 42297807  T
Q  103 ctatttccatgcccaaagaatctatcctaactgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctat 194  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42297808 ctatttctatgcccaaagaatctatcctaattgttcaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctat 42297899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 14634505 - 14634576
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||  || |||||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  14634505 atgatgagtaactttacaa--aagagatatcaaaggtttacaagaatcagtcttcaaacctaatgctacccaaa 14634576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 27420849 - 27420784
Alignment:
Q  15 ttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaatt 84  Q
    ||||||||||||||||||||||||    |||||  |||||||||||||||||||||||||||||||||||    
T  27420849 ttataatgatgagtaactttacaa----aagattccaaagggttacaagaatcagtcttcaaacctaatt 27420784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 46966729 - 46966920
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaagccagaatctatttccatgcccaaagaatctatcctaac---- 133  Q
    ||||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||  || |||||| ||||| ||  | ||||  || |||||||        
T  46966729 acaaagagatatcaaatggttacaataattagtcttcaaacctaattctacccaaagtcccgaatctttttccgtgagc-aagagactctcctaacattg 46966827  T
Q  134 ---tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacct--agtttgttgtttgtttctaaac 224  Q
       |||||||| |||||| |||||||||||| |||||   |||||||||| ||||| ||||| |||||||||  | ||||||||| | ||||||||    
T  46966828 ttttgtttaagatgaatcgaaacaatctcaaccctag---tgtttgttgccaagaggaatctctataaaccttaattttgttgttggcttctaaac 46966920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 1620521 - 1620595
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||| |||||||   | ||||||||||||||||||||||  || |||||||||||||||||| ||||    
T  1620521 tataatgatgagtaagtttacaa---agagatatcaaagggttacaagaactagccttcaaacctaattctacccaaa 1620595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 36871361 - 36871435
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||| |||||||||||   | ||||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  36871361 tataatgatgattaactttacaa---agagataacaaagggttgcaagaataagtcttcaaacctaattctacccaaa 36871435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 15823729 - 15823778
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  15823729 acaaagagatgtcaaagggttacaagaattagtcttcaaacctaattcta 15823778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 26763032 - 26762936
Alignment:
Q  139 aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaa-cctagtttgttgtttgtttctaaacaatgtttttctac 237  Q
    ||||||||||||| ||||| ||| |||||||||   |||| | | ||||||||| |||||| |||||||||||||| ||||||||||  |||||||||||    
T  26763032 aaggtgaatcaaatcaatcacaaccctagtgtt---tgttcccaggagaaatctctataaatcctagtttgttgttcgtttctaaaccctgtttttctac 26762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 17795457 - 17795400
Alignment:
Q  15 ttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||||    
T  17795457 ttataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtcttc 17795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 19103897 - 19103840
Alignment:
Q  15 ttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||||    
T  19103897 ttataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtcttc 19103840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 27703353 - 27703455
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaa--cctagtttgttgtttgtttctaaacaatgttt 231  Q
    |||| |||||||||||||||||||  ||||||||   |||||| ||| ||||||||||| || |||  |||||||| ||||||| ||||||||  |||||    
T  27703353 tgttcaaggtgaatcaaaacaatccaaatcctag---tgtttgatgccaagagaaatctctacaaaaccctagtttcttgtttgcttctaaaccttgttt 27703449  T
Q  232 ttctac 237  Q
    ||||||    
T  27703450 ttctac 27703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 27762169 - 27762209
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  27762169 tgtttaaggtgaatcaaaacaatctcaaccctagtgttgtt 27762209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 32264097 - 32264152
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||    
T  32264097 tataatgatgagtaactttacaa-aaagagatatcaatgggttacaagaataagtct 32264152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 25635578 - 25635523
Alignment:
Q  17 ataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    ||||||||||||||||||||||  || ||||||||| ||||||||||||| |||||||    
T  25635578 ataatgatgagtaactttacaa--aatagatatcaatgggttacaagaataagtcttc 25635523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 5858545 - 5858443
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  5858545 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 5858450  T
Q  231 tttctac 237  Q
    |||||||    
T  5858449 tttctac 5858443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 47878354 - 47878456
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  47878354 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 47878449  T
Q  231 tttctac 237  Q
    |||||||    
T  47878450 tttctac 47878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 4535697 - 4535665
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  4535697 gttacaagaatcagtcttcaaacctaattctac 4535665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 5858627 - 5858595
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  5858627 gttacaagaatcagtcttcaaacctaattctac 5858595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 10897088 - 10897056
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  10897088 gttacaagaatcagtcttcaaacctaattctac 10897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 11079600 - 11079568
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  11079600 gttacaagaatcagtcttcaaacctaattctac 11079568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 15823793 - 15823892
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaa-cctagtttgttgtttgtttctaaacaatgtttt 232  Q
    |||| ||||||||||||||||||||||  |||||   |||||||| | |||||||| || |||||| |||||||||||||| | ||| ||||  ||||||    
T  15823793 tgttcaaggtgaatcaaaacaatctcagccctag---tgtttgtttcaaagagaaaactctataaaccctagtttgttgttggcttccaaaccttgtttt 15823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 27762085 - 27762117
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  27762085 gttacaagaatcagtcttcaaacctaattctac 27762117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 29914052 - 29914084
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  29914052 gttacaagaatcagtcttcaaacctaattctac 29914084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 31021221 - 31021286
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaat 83  Q
    |||||||||||||||||||||||  | | | ||  |||||||||||||||| ||||||||||||||||    
T  31021221 tataatgatgagtaactttacaaagagatgtta--aaagggttacaagaattagtcttcaaacctaat 31021286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 38002868 - 38002828
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  38002868 tgttcaaggtgaatcaaaacaatctcaaccctagtgttgtt 38002828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 47878270 - 47878302
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  47878270 gttacaagaatcagtcttcaaacctaattctac 47878302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 47882981 - 47883013
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  47882981 gttacaagaatcagtcttcaaacctaattctac 47883013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 48390401 - 48390433
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  48390401 gttacaagaatcagtcttcaaacctaattctac 48390433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 53973744 - 53973809
Alignment:
Q  21 tgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||  |||||||||| ||| || |||||||||| ||||| |||| |||||||||    
T  53973744 tgatgagtaactttaca--aaaaagatattaaatggatacaagaatcggtctttaaacataattctac 53973809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 54188592 - 54188560
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  54188592 gttacaagaatcagtcttcaaacctaattctac 54188560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 54193309 - 54193277
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  54193309 gttacaagaatcagtcttcaaacctaattctac 54193277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 3306959 - 3306911
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||||||||    
T  3306959 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaat 3306911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 88
Target Start/End: Complemental strand, 3329975 - 3329944
Alignment:
Q  57 ttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||||    
T  3329975 ttacaagaatcagtcttcaaacctaattctac 3329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 6484554 - 6484510
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||    
T  6484554 atgatgagtaactttacaa--aaaagatatcaatgggttacaagaat 6484510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 7768741 - 7768694
Alignment:
Q  46 atatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||| ||| |||||||||||| ||||||||||||||||||||| ||||    
T  7768741 atattaaaaggttacaagaattagtcttcaaacctaattctactcaaa 7768694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 84
Target Start/End: Complemental strand, 13893548 - 13893517
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaatt 84  Q
    ||||||||||||||||||||||||||||||||    
T  13893548 agggttacaagaatcagtcttcaaacctaatt 13893517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 28761488 - 28761536
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||||||||    
T  28761488 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaat 28761536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 561836 - 561910
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||  ||||||||||||| |  |||||||||| |||| ||  |||||||||||| ||||    
T  561836 tataatgatgagtaactttaca--aaaaagatatcaatgacttacaagaataagtc-tcccacctaattctacccaaa 561910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 1618882 - 1618924
Alignment:
Q  183 agagaaatctatataaacc-tagtttgttgtttgtttctaaac 224  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  1618882 agagaaatctctataaaccctagtttgttgtttgtttctaaac 1618924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 10612961 - 10613063
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  | ||    
T  10612961 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatt 10613056  T
Q  231 tttctac 237  Q
    |||||||    
T  10613057 tttctac 10613063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 10897004 - 10896902
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  | ||    
T  10897004 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatt 10896909  T
Q  231 tttctac 237  Q
    |||||||    
T  10896908 tttctac 10896902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 10949359 - 10949388
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattc 85  Q
    ||||||||||||||||||||||||||||||    
T  10949359 gttacaagaatcagtcttcaaacctaattc 10949388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 24181578 - 24181524
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| | ||||||| ||||||||||||| |||||    
T  24181578 tataatgatgagtaactttaca--aaagaaatatcaatgggttacaagaataagtct 24181524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 25634085 - 25634031
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| || |||||||||| |||||    
T  25634085 tataatgatgagtaactttaca--aaagagatatcaatggattacaagaataagtct 25634031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 53468515 - 53468569
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  53468515 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 53468569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 53597434 - 53597380
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| | ||||||| ||||||||||||| |||||    
T  53597434 tataatgatgagtaactttaca--aaagaaatatcaacgggttacaagaataagtct 53597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 53917727 - 53917777
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  53917727 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 53917777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 10094177 - 10094205
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  10094177 caagaatcagtcttcaaacctaattctac 10094205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 10201057 - 10201085
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  10201057 caagaatcagtcttcaaacctaattctac 10201085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 10208103 - 10208131
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  10208103 caagaatcagtcttcaaacctaattctac 10208131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 10595133 - 10595165
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||| ||||||||||||||||||||||||||||    
T  10595133 gttataagaatcagtcttcaaacctaattctac 10595165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 10612877 - 10612909
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||| ||||||||||||||||||||||||||||    
T  10612877 gttataagaatcagtcttcaaacctaattctac 10612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 15823929 - 15823973
Alignment:
Q  269 atagagaaataaaacccttaaaatttacaacaaatctcacgctga 313  Q
    |||||||||||||||||| ||||||   |||||||||||||||||    
T  15823929 atagagaaataaaaccctcaaaattaggaacaaatctcacgctga 15823973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 20031501 - 20031541
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  20031501 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 20031541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 23633651 - 23633596
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||||||   ||||| ||||||||  ||||||||||||| |||||||    
T  23633651 tataatgatgagtaacttt---acaaagagatatcatcgggttacaagaataagtcttc 23633596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 23941939 - 23941887
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||  |||| |||||||||||| ||| ||||||||||||||||| ||||    
T  23941939 aaaagattccaaacggttacaagaataagtattcaaacctaattctacccaaa 23941887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 26763164 - 26763091
Alignment:
Q  15 ttataatgatgagtaactttacaacaaaaagatatc---aaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||   ||||| |||||||   |||||||||||| ||| |  ||||||||||||||||||    
T  26763164 ttataatgatgagtaacttt---acaaagagatatcaaaaaagggttacaataattaaacttcaaacctaattctac 26763091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 27544352 - 27544324
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  27544352 caagaatcagtcttcaaacctaattctac 27544324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 29914136 - 29914176
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  29914136 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 29914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 38002952 - 38002920
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||| |||||||||    
T  38002952 gttacaagaatcagtcttcaaacttaattctac 38002920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 3982238 - 3982467
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaagccagaatctatttccatgcc 115  Q
    |||||||||||||||||||||||  || ||||||||||| ||||||||||||||||||||||| ||||||||| ||||  ||  ||||| || || || |    
T  3982238 tataatgatgagtaactttacaa--aagagatatcaaagtgttacaagaatcagtcttcaaacttaattctacccaaagtcccaaatctcttcccgtgac 3982335  T
Q  116 caa-agaatctatccta--actgttt----aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatat-aaacctagttt 207  Q
    ||| | | || ||||||  | |||||    ||||||||| ||||||||||||| |||||   |||||||||| ||||||||||  ||| || ||||||||    
T  3982336 caagaaactcaatcctaatagtgtttctccaaggtgaataaaaacaatctcaaccctag---tgtttgttgccaagagaaatcactatgaaccctagttt 3982432  T
Q  208 gttgtttgtttctaaacaatgtttttctaccctct 242  Q
    ||||||||||||| |||  | ||||||||| ||||    
T  3982433 gttgtttgtttctgaaccctatttttctactctct 3982467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 26557737 - 26557631
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaa-cctagtttgttgtttgtttctaaacaatgtttt 232  Q
    |||||||||||||||||||||||| ||| |||||   |||||||||| ||||||||||| |||||| ||||||||||| ||||||||||| |  ||||||    
T  26557737 tgtttaaggtgaatcaaaacaatcccaaccctag---tgtttgttgccaagagaaatctctataaaccctagtttgttttttgtttctaatccctgtttt 26557641  T
Q  233 tctaccctct 242  Q
    ||||| ||||    
T  26557640 tctactctct 26557631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 31983589 - 31983664
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  31983589 tataatgatgagtaattttacaa--aaaagatatcaaagggttacaaaaataagtcttcaaacctaattctacccaaa 31983664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 25357913 - 25357844
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||| ||||||||    
T  25357913 tataatgatgagtaactttacaa--aagagatatcaaagggttacaagaataagtcttcaaacttaattcta 25357844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 47150955 - 47151030
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||| ||||||| ||  || ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  47150955 tataatgatgagcaactttagaa--aagagatatcaaagggttacaagaataagtcttcaaacctaattctacccaaa 47151030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 16185897 - 16185971
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||   | | ||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  16185897 tataatgatgagtaactttacaa---agatatatcaaagggttgcaagaataagtcttcaaacctaattctacccaaa 16185971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 12102359 - 12102284
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||  ||||||||||||| ||||| ||||||||||||||| ||||    
T  12102359 tataatgatgagtaactttacaa--aagagatatcagtgggttacaagaataagtctccaaacctaattctacccaaa 12102284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 54906841 - 54906791
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  54906841 acaaagagatatcaaagagttacaagaatcagtcttcaaacctaattctac 54906791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 2881018 - 2880979
Alignment:
Q  49 tcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2881018 tcaaagggttacaagaatcagtcttcaaacctaattctac 2880979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 9863974 - 9863904
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||   | |||||||||| |||||||||||| ||||||||||| ||||||||| ||||    
T  9863974 atgatgagtaactttacaa---agagatatcaaaaggttacaagaattagtcttcaaacttaattctacccaaa 9863904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 32274090 - 32274184
Alignment:
Q  139 aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaac-ctagtttgttgtttgtttctaaacaatgtttttct 235  Q
    |||||||||||||||||||||||  ||||   |||||||||| || |||||||| ||||||| ||||||||||||| | ||||||||  |||||||||    
T  32274090 aaggtgaatcaaaacaatctcaactctag---tgtttgttgccaatagaaatctctataaactctagtttgttgttggcttctaaaccttgtttttct 32274184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 40999011 - 40999086
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||| |||||||||||||||||  || ||||||||||||||||||| |  |||||| ||||||||||||||| ||||    
T  40999011 tataacgatgagtaactttacaa--aagagatatcaaagggttacaaaacacagtctccaaacctaattctacccaaa 40999086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 28453954 - 28453885
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||  ||| |||||||||| | |||||||||| ||||||| |||||||||||||    
T  28453954 tataatgatgagtaactttaca--aaagagatatcaaaagtttacaagaattagtcttc-aacctaattctac 28453885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 47151210 - 47151277
Alignment:
Q  262 tatatttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatacgtttatttt 329  Q
    ||||||||| ||||||||||||||| |||||||  ||||||| ||||||||| ||||||  |||||||    
T  47151210 tatatttatggagaaataaaaccctcaaaatttggaacaaatgtcacgctgaaaaatactgttatttt 47151277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 9022577 - 9022509
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaa-ag-ggttacaagaatcagtcttcaaacctaattc 85  Q
    |||||||||||||||||||||||   | ||||||||| || |||||||||||| ||||||||||||||||||    
T  9022577 tataatgatgagtaactttacaa---agagatatcaatagaggttacaagaattagtcttcaaacctaattc 9022509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 13072080 - 13072117
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13072080 gttacaagaatcagtcttcaaacctaattctacccaaa 13072117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 15312315 - 15312213
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  15312315 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtt 15312220  T
Q  231 tttctac 237  Q
    |||||||    
T  15312219 tttctac 15312213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 18537536 - 18537590
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  18537536 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 18537590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 38890287 - 38890341
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  38890287 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 38890341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 54928710 - 54928776
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaatt 84  Q
    |||| ||||||||||||||||||  || |||||| |||  ||||||||||||||||||||||| |||||    
T  54928710 tatagtgatgagtaactttacaa--aagagatattaaaatgttacaagaatcagtcttcaaacttaatt 54928776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 4556158 - 4556190
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  4556158 gttacaagaatcagtcttcaaacctaattctac 4556190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 4558394 - 4558362
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  4558394 gttacaagaatcagtcttcaaacctaattctac 4558362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 4570177 - 4570145
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  4570177 gttacaagaatcagtcttcaaacctaattctac 4570145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 7050356 - 7050388
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  7050356 gttacaagaatcagtcttcaaacctaattctac 7050388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 15312399 - 15312367
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  15312399 gttacaagaatcagtcttcaaacctaattctac 15312367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 16489432 - 16489400
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  16489432 gttacaagaatcagtcttcaaacctaattctac 16489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 16689039 - 16689071
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  16689039 gttacaagaatcagtcttcaaacctaattctac 16689071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 23001468 - 23001533
Alignment:
Q  19 aatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||| |||||||||||    ||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  23001468 aatgatgaataactttacaa----aagatttcaaatggttacaataatcggtcttcaaacctaattctac 23001533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 31300507 - 31300475
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  31300507 gttacaagaatcagtcttcaaacctaattctac 31300475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 36771479 - 36771447
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  36771479 gttacaagaatcagtcttcaaacctaattctac 36771447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 16638826 - 16638752
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt 209  Q
    |||||||||||||||||||||||| ||| |||||   |||||||||| |||||||| ||| |||||| ||||||||||    
T  16638826 tgtttaaggtgaatcaaaacaatcccaaccctag---tgtttgttgcaaagagaaattctctataaaccctagtttgt 16638752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 16638913 - 16638878
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||| |||||||    
T  16638913 agggttacaagaatcagtcttcaaacctcattctac 16638878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 41997760 - 41997689
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaa 94  Q
    |||||||||||||||||||  || |||||| |||||||||||||||| |||| ||  |||||||||||| |||||    
T  41997760 atgatgagtaactttacaa--aagagatattaaagggttacaagaataagtc-tcccacctaattctacccaaaa 41997689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 5336863 - 5336913
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||| |||||| | ||| |||||||||| |||||||||||||||||||||    
T  5336863 acaaagagatataagaggattacaagaattagtcttcaaacctaattctac 5336913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 88
Target Start/End: Complemental strand, 25699830 - 25699800
Alignment:
Q  58 tacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||    
T  25699830 tacaagaatcagtcttcaaacctaattctac 25699800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 36771395 - 36771342
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaat 190  Q
    |||| ||||||||||||||||||||||| |||||   |||||||||| |||||||||    
T  36771395 tgttcaaggtgaatcaaaacaatctcaaccctag---tgtttgttgccaagagaaat 36771342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 3578733 - 3578789
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttca 75  Q
    |||||||||||||||||||   ||||| ||||||||||  ||||||||||| ||||||||    
T  3578733 tataatgatgagtaacttt---acaaagagatatcaaaatgttacaagaattagtcttca 3578789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 3759990 - 3759945
Alignment:
Q  268 tatagagaaataaaacccttaaaatttacaacaaatctcacgctga 313  Q
    |||||||||||||| |||| |||||||  |||||||||||||||||    
T  3759990 tatagagaaataaatccctcaaaatttggaacaaatctcacgctga 3759945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 13544227 - 13544177
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  13544227 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 13544177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 15032612 - 15032658
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    ||||||||||||||||||||  ||| ||||||||| |||||||||||||    
T  15032612 taatgatgagtaactttaca--aaagagatatcaatgggttacaagaat 15032658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 16453581 - 16453527
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  16453581 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 16453527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 18586965 - 18586863
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  | ||    
T  18586965 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatt 18586870  T
Q  231 tttctac 237  Q
    |||||||    
T  18586869 tttctac 18586863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 19322965 - 19322911
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||| ||| |||||    
T  19322965 tataatgatgagtaactttaca--aaagagatatcaatgggttacaaaaataagtct 19322911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 31300423 - 31300321
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttg-ttgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||  |||| ||||||||||  ||||    
T  31300423 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgcaaagagaaattctctataaaccctagtttgaatgttggtttctaaaccctgtt 31300328  T
Q  231 tttctac 237  Q
    |||||||    
T  31300327 tttctac 31300321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 33415553 - 33415603
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  33415553 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 33415603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 37313127 - 37313181
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| |||||| || ||||||||||||| |||||    
T  37313127 tataatgatgagtaactttaca--aaagagatattaatgggttacaagaataagtct 37313181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 47274994 - 47274944
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  47274994 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 47274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 8529346 - 8529318
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  8529346 caagaatcagtcttcaaacctaattctac 8529318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 10113122 - 10113066
Alignment:
Q  38 acaaaaagatatcaaag-ggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||| ||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  10113122 acaaagagatatcaaaaaggttacaagaattagtcttcaaatctaattctacccaaa 10113066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 11853548 - 11853508
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| ||||| ||||||    
T  11853548 tgttcaaggtgaatcaaaacaatctcaaccctagagttgtt 11853508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 11853628 - 11853600
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  11853628 caagaatcagtcttcaaacctaattctac 11853600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 15317041 - 15317009
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||| |||||||||||||||||||||    
T  15317041 gttacaagaattagtcttcaaacctaattctac 15317009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 15831140 - 15831100
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  15831140 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 15831100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 15831220 - 15831192
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  15831220 caagaatcagtcttcaaacctaattctac 15831192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 16489348 - 16489308
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| | ||||||||||    
T  16489348 tgttcaaggtgaatcaaaacaatctcaaccttagtgttgtt 16489308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 25699748 - 25699708
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  25699748 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 25699708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 29609553 - 29609601
Alignment:
Q  40 aaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||| |||||||| ||  ||||| |||||||||||||||    
T  29609553 aaaaagatatcaaaaggttacaataaatagtctacaaacctaattctac 29609601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Complemental strand, 36769562 - 36769534
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaatt 84  Q
    |||||||||||||||||||||||||||||    
T  36769562 gttacaagaatcagtcttcaaacctaatt 36769534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 38208765 - 38208813
Alignment:
Q  40 aaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||| ||||||||||||||||| ||||| ||||||||| ||| |||||    
T  38208765 aaaaaaatatcaaagggttacaataatcaatcttcaaacttaaatctac 38208813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 55822344 - 55822316
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  55822344 caagaatcagtcttcaaacctaattctac 55822316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 15143684 - 15143608
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaa 94  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  15143684 tataatgatgagtaactttacaa--aagagatatcaaagggttacaagaataagtcttcaaacctaattctacccaaaa 15143608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 15445328 - 15445403
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15445328 tataatgatgagtaactttacaa--aagagatatcaaagggttacaagaatcattcttcaaacctaattctactcaaa 15445403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 17413228 - 17413298
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||| |||||||||||||||||    
T  17413228 tataatgatgagtaactttacaa--aagagatatcaaagggttacaagaataagttttcaaacctaattctac 17413298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 4897947 - 4897872
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||| | |  ||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  4897947 tataatgatgagtaactttacaataga--gatatcaaatggttacaagaatcagtcttcaagcctaattctacccaaa 4897872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 36208794 - 36208719
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  36208794 tataatgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtctacaaacctaattctacccaaa 36208719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 13295935 - 13295883
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  13295935 aaaagatttcaaagggttacaagaatcagtcttcaaacttaattctacccaaa 13295883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 35430398 - 35430323
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaaggg-ttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||   | |||||||||| |  |||||||||||||||||||||||||||||||| ||||    
T  35430398 tataatgatgagtaactttacaa---agagatatcaaaagaattacaagaatcagtcttcaaacctaattctacccaaa 35430323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 26406656 - 26406745
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaa-cctagtttg-ttgtttgtttctaaac 224  Q
    |||| ||||||||||||||||||||||| |||||   |||||||||| ||||||| ||| |||||| ||||||||| ||||| ||||||||||    
T  26406656 tgttcaaggtgaatcaaaacaatctcaaccctag---tgtttgttgccaagagaattctctataaaccctagtttgtttgttggtttctaaac 26406745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 32520634 - 32520582
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||| ||||    
T  32520634 aaaagattccaaagggttacaagaatcagttttcaaacctaattctacccaaa 32520582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 10627450 - 10627415
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||||||||    
T  10627450 agggttacaagaatcagtcttcaaacctaattctac 10627415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 13295703 - 13295656
Alignment:
Q  264 tatttatagagaaataaaacccttaaaatttacaacaaatctcacgct 311  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||    
T  13295703 tatttatagagaaataaaaccctcaaaatttagaataaatctcacgct 13295656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 40221740 - 40221684
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| |||||||    
T  40221740 tataatgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtcttc 40221684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 1240511 - 1240474
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  1240511 gttacaagaatcagtcttcaaacctaattctacccaaa 1240474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 22672833 - 22672731
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  22672833 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 22672738  T
Q  231 tttctac 237  Q
    |||||||    
T  22672737 tttctac 22672731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 40222762 - 40222660
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||||||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| | ||||||||  ||||    
T  40222762 tgttcaaggtgaatcaaaacaatctcaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccttgtt 40222667  T
Q  231 tttctac 237  Q
    |||||||    
T  40222666 tttctac 40222660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 2144624 - 2144691
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaag-ggttacaagaatcagtcttcaaacctaattc 85  Q
    |||||||||||||||||||||||   | |||||| |||  |||||||||||| ||||||||||||||||||    
T  2144624 tataatgatgagtaactttacaa---agagatataaaaaaggttacaagaattagtcttcaaacctaattc 2144691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 11962532 - 11962564
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  11962532 gttacaagaatcagtcttcaaacctaattctac 11962564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 17841348 - 17841380
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  17841348 gttacaagaatcagtcttcaaacctaattctac 17841380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 20045258 - 20045197
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacc 79  Q
    ||||||||| |||||||||||||  |||||||||||| |||||| ||||||||| | |||||||    
T  20045258 tataatgataagtaactttacaa--aaaagatatcaatgggttaaaagaatcagccctcaaacc 20045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 22672917 - 22672885
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  22672917 gttacaagaatcagtcttcaaacctaattctac 22672885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 42238343 - 42238311
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  42238343 gttacaagaatcagtcttcaaacctaattctac 42238311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 9020436 - 9020380
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    ||||||||||||||| |||||||  || ||||||||| ||||||||||||| |||||||    
T  9020436 tataatgatgagtaattttacaa--aagagatatcaatgggttacaagaataagtcttc 9020380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 31782553 - 31782588
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||| |||||||||||||||||||||    
T  31782553 agggttacaagaattagtcttcaaacctaattctac 31782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 34477133 - 34477188
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||| ||| ||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  34477133 acaaagagaaatcaatgggttacaagaataagtctccaaacctaattctacccaaa 34477188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 34479498 - 34479553
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||| ||| ||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  34479498 acaaagagaaatcaatgggttacaagaataagtctccaaacctaattctacccaaa 34479553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 17841432 - 17841474
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttg 176  Q
    |||| ||||||||||||||||||||||| |||||| |||||||    
T  17841432 tgttcaaggtgaatcaaaacaatctcaaccctagtattgtttg 17841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 696095 - 696041
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||| |||||||||||  || ||||||||| ||||||||||||| |||||    
T  696095 tataatgatgaataactttacaa--aagagatatcaatgggttacaagaataagtct 696041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 11962623 - 11962656
Alignment:
Q  141 ggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    ||||||||||||||||||||| ||||||||||||    
T  11962623 ggtgaatcaaaacaatctcaaccctagtgttgtt 11962656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 17818555 - 17818605
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  17818555 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 17818605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 18511277 - 18511327
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  18511277 atgatgagtaactttacaa--aagagatatcaacgggttacaagaataagtct 18511327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 25445576 - 25445547
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  25445576 acaagaatcagtcttcaaacctaattctac 25445547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 25452575 - 25452546
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  25452575 acaagaatcagtcttcaaacctaattctac 25452546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 25838106 - 25838069
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgtt 171  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  25838106 tgttcaaggtgaatcaaaacaatctcaaccctagtgtt 25838069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 35385635 - 35385737
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||| |    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  35385635 tgttcaaggtgaatcaaaacaatcccaaccctagag----ttgttgccaagagaaattctctataaaccctagtttgtatgttagtttctaaactttgtt 35385730  T
Q  231 tttctac 237  Q
    |||||||    
T  35385731 tttctac 35385737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 1170890 - 1170862
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  1170890 caagaatcagtcttcaaacctaattctac 1170862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 1240427 - 1240387
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  1240427 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 1240387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 2298104 - 2298132
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  2298104 caagaatcagtcttcaaacctaattctac 2298132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 16093390 - 16093422
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||| ||||||||||    
T  16093390 gttacaagaatcagtcttcaaatctaattctac 16093422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 25562474 - 25562506
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatccta 166  Q
    |||| ||||||||||||||||||||||||||||    
T  25562474 tgttcaaggtgaatcaaaacaatctcaatccta 25562506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 34033630 - 34033715
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatc-aaagggttacaagaatcagtcttcaaacctaattctacacaaaagccagaatct 104  Q
    ||||||||||||||||||||  ||| ||||||| || ||||||| | ||  ||||||||||| ||||||||| ||||| || ||||||    
T  34033630 taatgatgagtaactttaca--aaagagatatcgaaggggttaccataacaagtcttcaaacttaattctacccaaaatcctgaatct 34033715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 35385555 - 35385583
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  35385555 caagaatcagtcttcaaacctaattctac 35385583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 40222846 - 40222814
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||| |||||||||    
T  40222846 gttacaagaatcagtcttcaaacataattctac 40222814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 42238297 - 42238200
Alignment:
Q  139 aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtttttct 235  Q
    ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| | ||||||||  |||||||||    
T  42238297 aaggtgaatcaaaacaatcccaaccctagtgt----tgttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttct 42238202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 30445777 - 30445702
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  30445777 tataatgatgagtaactttacaa--aagagatatcaaagggttacaagaattagtcttcaaacctaattctacccaaa 30445702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 345
Target Start/End: Complemental strand, 7293890 - 7293720
Alignment:
Q  182 aagagaaatctatataaacc-tagtttgttgtttgtttctaaacaatgtttttctaccctctcttttt-catctttt---tgatctatatttatagagaa 276  Q
    ||||||||||| ||| |||| |||||||||||||| || |||||  | ||||||||| |||||||||| |||||  |   |||||| |||||||||||||    
T  7293890 aagagaaatctctatgaaccctagtttgttgtttgcttttaaaccctatttttctactctctcttttttcatctgatatgtgatctgtatttatagagaa 7293791  T
Q  277 ataaaacccttaaaatttacaacaaatctcacgctgagaaatacgttt--attttctccttcaacgcaaaa 345  Q
    |||||||||| |||||||  ||||||||||| ||| | ||||||||||   |||||||||||| |||||||    
T  7293790 ataaaaccctcaaaatttggaacaaatctcaagctaaaaaatacgttttatttttctccttcagcgcaaaa 7293720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 25078621 - 25078689
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||| ||||||||||||||  || ||||||||||||||||||||||| |||||||||||||||||||||    
T  25078621 taatgacgagtaactttacaa--aagagatatcaaagggttacaagaataagtcttcaaacctaattctac 25078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 19696693 - 19696624
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||||||||| |||||||||||  || |||||||||||| |||||||||| ||||||||||||||||||||    
T  19696693 tataatgatgaataactttacaa--aagagatatcaaaggattacaagaataagtcttcaaacctaattcta 19696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 20527058 - 20526989
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||| |||||||||||   | |||||||||| |||||||||||| |||||||||||||||||||||    
T  20527058 tataatgatgaataactttacaa---agagatatcaaaaggttacaagaattagtcttcaaacctaattctac 20526989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 28078257 - 28078323
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattc 85  Q
    |||||||||||||||||||||||  || |||||||||||| |||||||||| ||||||||||||||||||    
T  28078257 tataatgatgagtaactttacaa--aagagatatcaaagg-ttacaagaataagtcttcaaacctaattc 28078323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 12186133 - 12186208
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||| | ||||||||||| ||||| ||||||||||| ||| ||||    
T  12186133 tataatgatgagtaactttacaa--aagagatatcaatgagttacaagaataagtctccaaacctaattgtacccaaa 12186208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 12937255 - 12937324
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||   | |||||| ||| |||||||||||| || ||||||||||||||||||    
T  12937255 tataatgatgagtaactttacaa---agagatattaaatggttacaagaattagccttcaaacctaattctac 12937324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 26945397 - 26945322
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||| | ||||||| ||| ||||| ||||||||||||||| ||||    
T  26945397 tataatgatgagtaactttacaa--aagagatatcaatgagttacaaaaataagtctacaaacctaattctacccaaa 26945322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 28037795 - 28037866
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||  || ||||||||||||||||||||||| ||  || |||||||||||||| ||||    
T  28037795 atgatgagtaactttacaa--aagagatatcaaagggttacaagaataagattttaaacctaattctacccaaa 28037866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 3833530 - 3833460
Alignment:
Q  16 tataatgatgagt-aactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||||||||||| ||||||||||  || ||||||||||||||||||||||||| | ||||||| ||||||||    
T  3833530 tataatgatgagttaactttacaa--aagagatatcaaagggttacaagaatcaattttcaaacataattcta 3833460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 7542463 - 7542512
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  7542463 acaaagagatatcaaagggttacaaaaattagtcttcaaacctaattcta 7542512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 24542862 - 24542945
Alignment:
Q  139 aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacc-tagtttgttgtttgtttctaaac 224  Q
    ||||||||||||||||||| ||| |||||   |||||||||| ||||||||||| |||||||| ||||||| |||| | ||||||||    
T  24542862 aaggtgaatcaaaacaatcccaaccctag---tgtttgttgccaagagaaatctctataaaccatagtttggtgttggcttctaaac 24542945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 22858015 - 22858085
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaa-gggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||   | | |||||||| ||||||||||||| ||||||||||||||| |||||    
T  22858015 tataatgatgagtaactttacaa---agatatatcaaaagggttacaagaattagtcttcaaacctaaatctac 22858085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 12911508 - 12911577
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||   | |||||| ||| |||||||||||| || |||||||||||| |||||    
T  12911508 tataatgatgagtaactttacaa---agagatattaaatggttacaagaattagccttcaaacctaactctac 12911577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 6843377 - 6843311
Alignment:
Q  23 atgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||    | ||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  6843377 atgagtaactttacaa----aggatttcaaagggttacaagaatcaatcttcaaatctaattctacccaaa 6843311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 15719895 - 15719841
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  15719895 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 15719841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 17695034 - 17695136
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||    |||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  17695034 tgttcaaggtgaatcaaaacaatcccaaccctagt----tttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 17695129  T
Q  231 tttctac 237  Q
    |||||||    
T  17695130 tttctac 17695136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 25466082 - 25466184
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||||||| | |||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  25466082 tgttcaaggtgaatcaaaacaatctcaaccttagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 25466177  T
Q  231 tttctac 237  Q
    |||||||    
T  25466178 tttctac 25466184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 3577588 - 3577620
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  3577588 gttacaagaatcagtcttcaaacctaattctac 3577620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 13467563 - 13467595
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  13467563 gttacaagaatcagtcttcaaacctaattctac 13467595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 17694950 - 17694982
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  17694950 gttacaagaatcagtcttcaaacctaattctac 17694982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 25465998 - 25466030
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  25465998 gttacaagaatcagtcttcaaacctaattctac 25466030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 3390630 - 3390578
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  3390630 taatgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 3390578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 5165911 - 5165946
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||| |||||||||||||||||||    
T  5165911 agggttacaagaatcattcttcaaacctaattctac 5165946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 88
Target Start/End: Original strand, 12166246 - 12166277
Alignment:
Q  57 ttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||||    
T  12166246 ttacaagaatcagtcttcaaacctaattctac 12166277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 13040007 - 13039951
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||||    
T  13040007 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtcttc 13039951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 16455487 - 16455535
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    ||||||||||||||| |||||||  || |||||||||||||||||||||||    
T  16455487 tataatgatgagtaattttacaa--aagagatatcaaagggttacaagaat 16455535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 24338508 - 24338564
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||||    
T  24338508 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtcttc 24338564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 87
Target Start/End: Complemental strand, 33215910 - 33215879
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||||||||||||||||||||||||||||||    
T  33215910 gttacaagaatcagtcttcaaacctaattcta 33215879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 17904433 - 17904479
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    |||||||  ||||||||||||||||||||| || |||||||||||||    
T  17904433 aaaagattccaaagggttacaagaatcagtgtttaaacctaattcta 17904479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 25465653 - 25465706
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||   ||||| ||||||||||||| ||||||||| |||||    
T  25465653 tataatgatgagtaacttt---acaaagagatatcaaaggggtacaagaataagtct 25465706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 1069780 - 1069834
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  1069780 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 1069834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 3577697 - 3577799
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| |||| |||||  ||||    
T  3577697 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgcaaagagaaattctctataaaccctagtttgtatgttggtttttaaaccctgtt 3577792  T
Q  231 tttctac 237  Q
    |||||||    
T  3577793 tttctac 3577799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 3631999 - 3632053
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  3631999 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 3632053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 4641036 - 4641007
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  4641036 acaagaatcagtcttcaaacctaattctac 4641007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 9020175 - 9020125
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  9020175 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 9020125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 13057447 - 13057393
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  13057447 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 13057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 15532746 - 15532796
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  15532746 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 15532796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 22342900 - 22342937
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  22342900 gttacaagaatcagtcttcaaacctaatactacccaaa 22342937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 22351951 - 22351988
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  22351951 gttacatgaatcagtcttcaaacctaattctacccaaa 22351988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 24542754 - 24542802
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||| ||||||||||||||||||||||||| | || |||||||||||||    
T  24542754 acaaagagatatcaaagggttacaagaatcaat-tttaaacctaattcta 24542802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 25941749 - 25941720
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  25941749 acaagaatcagtcttcaaacctaattctac 25941720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 32280249 - 32280195
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||| |||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  32280249 tataacgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 32280195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 13467646 - 13467686
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  13467646 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 13467686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 13878806 - 13878778
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  13878806 caagaatcagtcttcaaacctaattctac 13878778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 13883554 - 13883526
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  13883554 caagaatcagtcttcaaacctaattctac 13883526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 16785998 - 16785970
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  16785998 caagaatcagtcttcaaacctaattctac 16785970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 17036054 - 17036014
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  17036054 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 17036014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 19701961 - 19701993
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||| |||||||||    
T  19701961 gttacaagaatcagtcttcaaacataattctac 19701993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 22342984 - 22343024
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||| ||||||||||||||||||| ||||||||||||    
T  22342984 tgttcaagttgaatcaaaacaatctcaaccctagtgttgtt 22343024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 25941643 - 25941542
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaat-ctatataaacctagtttgt-tgtttgtttctaaacaatgttt 231  Q
    |||| ||||||||||||||||||| ||| ||||| ||||||     | ||||||||| || ||||| |||||||||  |||| |||||||||| ||||||    
T  25941643 tgttcaaggtgaatcaaaacaatcccaaccctagagttgtta----ccaagagaaattctctataaccctagtttgaatgttggtttctaaaccatgttt 25941548  T
Q  232 ttctac 237  Q
    ||||||    
T  25941547 ttctac 25941542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 26887327 - 26887355
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  26887327 caagaatcagtcttcaaacctaattctac 26887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 31248817 - 31248845
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  31248817 caagaatcagtcttcaaacctaattctac 31248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 33215821 - 33215724
Alignment:
Q  139 aaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtttttct 235  Q
    ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| | ||||||||  |||||||||    
T  33215821 aaggtgaatcaaaacaatcacaaccctagtgt----tgttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaactctgtttttct 33215726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 35201429 - 35201457
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  35201429 caagaatcagtcttcaaacctaattctac 35201457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 13125521 - 13125596
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  13125521 tataatgatgagtaactttacaa--aagagatatcaaagggttacaagaataagtcttcaaacctaattctacccaaa 13125596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 30790464 - 30790539
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || ||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  30790464 tataatgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtctccaaacctaattctacacaaa 30790539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 16561683 - 16561610
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  16561683 taatgatgagtaactttacaa--aagagatatcaaagggttacaagaataagtcttcaaacctatttctacccaaa 16561610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 30738697 - 30738769
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaaa 94  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  30738697 atgatgagtaactttacaa--aagagacatcaaagggttacaagaataagtcttcaaacctaattctacccaaaa 30738769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 46783246 - 46783191
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  46783246 acaaaaagatatcaaagggttacaagaattagtcttcaaacctaattctacccaaa 46783191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 26613303 - 26613378
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||| ||||||||| |||  || ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26613303 tataatgattagtaactttccaa--aagagatatcaaagggttacaagaataagtcttcaaacctaattctacccaaa 26613378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 26332877 - 26332933
Alignment:
Q  264 tatttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatac 320  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||    
T  26332877 tatttatagagaaatcaaaccctcaaaatttaaaacaaatctcacgctgaaaaatac 26332933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 43104379 - 43104303
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaag-aatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||| ||  | ||||||||||||||||||| ||||    
T  43104379 tataatgatgagtaactttaca--aaagagatatcaaagggttacaagaaaaaaatcttcaaacctaattctacccaaa 43104303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 155924 - 155856
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    |||||||||||||||||||||||   | ||||| |||| |||||||||||| | ||||||||||||||||||    
T  155924 tataatgatgagtaactttacaa---agagataacaaaaggttacaagaattactcttcaaacctaattcta 155856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 13125779 - 13125839
Alignment:
Q  264 tatttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatacgttta 325  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||||    
T  13125779 tatttatagagaaataaaaccctcaaaattaggaacaaatctcacgctga-aaatacgttta 13125839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 28279484 - 28279414
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||  || ||||  ||| | ||||||||||| |||||||||||||||||||||    
T  28279484 tataatgatgagtaactttacaa--aagagatgccaatgagttacaagaattagtcttcaaacctaattctac 28279414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 13785355 - 13785407
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||| ||||    
T  13785355 aaaagattccaaagggttataagaatcagtcttcaaacctaattctacccaaa 13785407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 31047826 - 31047914
Alignment:
Q  259 atctatatttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatacg--ttta-ttttctccttcaacgcaaaa 345  Q
    |||| |||||||| | |||||||||||| |||||||  ||||||||||||||||| |||||||  |||| |||||||||||| |||||||    
T  31047826 atctctatttataaaaaaataaaaccctcaaaatttggaacaaatctcacgctga-aaatacgcttttatttttctccttcagcgcaaaa 31047914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 14353195 - 14353111
Alignment:
Q  3 ctcttcgttcacttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||   ||||||||||| |||||||||||    ||||| |||||||||||||||||| ||| ||||||||||||||||| ||||    
T  14353195 ctcttcgttccactataatgatgaataactttacaa----aagatttcaaagggttacaagaat-agt-ttcaaacctaattctacccaaa 14353111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 49495274 - 49495328
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  49495274 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaatgagtct 49495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 49959246 - 49959202
Alignment:
Q  39 caaaaagatatcaaagggttacaagaatcagtcttcaaacctaatt 84  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  49959246 caaaaagatatcaaagggttaaaagaatcagt-ttcaaacctaatt 49959202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 2401320 - 2401352
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  2401320 gttacaagaatcagtcttcaaacctaattctac 2401352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 2401404 - 2401444
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  2401404 tgttcaaggtgaatcaaaacaatctcaaccctagtgttgtt 2401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 10115993 - 10115926
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||   | |||||||||| |||| ||||||| | | |||||||||||||||||    
T  10115993 taatgatgagtaactttacaa---agagatatcaaatggtttcaagaatgactgttcaaacctaattctac 10115926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 21353445 - 21353477
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  21353445 gttacaagaatcagtcttcaaacctaattctac 21353477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 25134154 - 25134122
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  25134154 gttacaagaatcagtcttcaaacctaattctac 25134122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 3579681 - 3579733
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  3579681 taatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 3579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 14183655 - 14183711
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||| ||||||| |||||||    
T  14183655 tataatgatgagtaactttaca--aaagagatatcaatgggttgcaagaataagtcttc 14183711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16429175 - 16429119
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttc 74  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||||    
T  16429175 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtcttc 16429119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 42922446 - 42922394
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  42922446 taatgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 42922394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 17186190 - 17186245
Alignment:
Q  15 ttataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||||||  ||| |||||| || ||||||||||||| |||||    
T  17186190 ttataatgatgagtaactttaca--aaagagatattaatgggttacaagaataagtct 17186245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 27916714 - 27916646
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaag--ggttacaagaatcagtcttcaaacctaattc 85  Q
    ||||| |||||||||||||||||   | |||||||||||  ||||| |||||| ||||||||||||||||||    
T  27916714 tataacgatgagtaactttacaa---agagatatcaaagaaggttaaaagaattagtcttcaaacctaattc 27916646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 3091289 - 3091326
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgtt 171  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  3091289 tgttcaaggtgaatcaaaacaatctcaaccctagtgtt 3091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 4131439 - 4131491
Alignment:
Q  16 tataatgatgagtaactttac--aacaaaaagatatcaaagggttacaagaat 66  Q
    |||||||||||||||||||||  || | ||||||||||| |||||||||||||    
T  4131439 tataatgatgagtaactttacaaaagagaaagatatcaatgggttacaagaat 4131491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 4144866 - 4144903
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgtt 171  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4144866 tgttcaaggtgaatcaaaacaatctcaaccctagtgtt 4144903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 6756744 - 6756690
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| |||||||||  |||||||||||| |||||    
T  6756744 tataatgatgagtaactttaca--aaagagatatcaataggttacaagaataagtct 6756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 8213835 - 8213876
Alignment:
Q  265 atttatagagaaataaaacccttaaaatttacaacaaatctc 306  Q
    |||||||| ||||||||||||| |||||||| ||||||||||    
T  8213835 atttatagggaaataaaaccctcaaaatttagaacaaatctc 8213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 8347336 - 8347390
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||| ||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  8347336 tataataatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 8347390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 9241149 - 9241203
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| | ||||||||||| |||||    
T  9241149 tataatgatgagtaactttaca--aaagagatatcaatgagttacaagaataagtct 9241203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 9526465 - 9526363
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||| |    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  9526465 tgttcaaggtgaatcaaaacaatcccaaccctagag----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 9526370  T
Q  231 tttctac 237  Q
    |||||||    
T  9526369 tttctac 9526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 11457542 - 11457592
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  11457542 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 11457592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 18839805 - 18839751
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  18839805 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 18839751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 20566853 - 20566956
Alignment:
Q  135 gtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacctagtttgttgtttgtttctaaacaatgtttttc 234  Q
    |||||||||||||||||| ||||  || |||||||||   ||| |  ||||||||||||| ||| | |||||||||||||| ||||||||  |||||| |    
T  20566853 gtttaaggtgaatcaaaataatcctaaccctagtgtt---tgtcgtcaagagaaatctat-taaccttagtttgttgtttgcttctaaaccctgttttcc 20566948  T
Q  235 taccctct 242  Q
    ||| ||||    
T  20566949 tactctct 20566956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 40134162 - 40134108
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| | ||||||||||| |||||    
T  40134162 tataatgatgagtaactttaca--aaagagatatcaatgtgttacaagaataagtct 40134108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 50078884 - 50078938
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||| |||||||||||  || ||||||||| ||||||||||||| |||||    
T  50078884 tataatgatgaataactttacaa--aagagatatcaatgggttacaagaataagtct 50078938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 2232676 - 2232648
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  2232676 caagaatcagtcttcaaacctaattctac 2232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 2393381 - 2393413
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||| ||||||||||    
T  2393381 gttacaagaatcagtcttcaaatctaattctac 2393413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 4144782 - 4144814
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||| |||||||||||||||||||    
T  4144782 gttacaagaatcaatcttcaaacctaattctac 4144814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 9521794 - 9521766
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  9521794 caagaatcagtcttcaaacctaattctac 9521766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 9526545 - 9526517
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  9526545 caagaatcagtcttcaaacctaattctac 9526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 21353529 - 21353569
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  21353529 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 21353569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 25127825 - 25127793
Alignment:
Q  262 tatatttatagagaaataaaacccttaaaattt 294  Q
    ||||||||||||||||||||||||| |||||||    
T  25127825 tatatttatagagaaataaaaccctcaaaattt 25127793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 37990864 - 37990820
Alignment:
Q  50 caaagggttacaagaatcagtcttcaaacctaattctacacaaaa 94  Q
    |||||| ||||||||||| |||| ||||||||||||||| |||||    
T  37990864 caaaggattacaagaatcggtctacaaacctaattctacccaaaa 37990820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 33603993 - 33603887
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacc-tagtttgttgtttgtttctaaacaatgtttt 232  Q
    |||| ||||||||||||||||||| ||| |||| ||||   |||||| || |||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  33603993 tgttcaaggtgaatcaaaacaatcccaaccctaatgtt---tgttgccaaaagaaatctctataaaccctagtttgttgtttgtttctaaaccatgtttt 33603897  T
Q  233 tctaccctct 242  Q
    ||||| ||||    
T  33603896 tctactctct 33603887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 15694095 - 15694023
Alignment:
Q  19 aatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||  || |||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  15694095 aatgatgagtaactttacaa--aagagatatcaaaaggttacaagaattagtcttcaaacctaattctacccaaa 15694023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 40699568 - 40699493
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||  || |||||||||||| |||||| ||| ||||||||||||||||||||| ||||    
T  40699568 tataatgatgagtaactttacaa--aagagatatcaaaggattacaaaaataagtcttcaaacctaattctacccaaa 40699493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 30261956 - 30262053
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaacc-tagtttgttgtttgtttctaaacaatgtttt 232  Q
    ||||| |||||||||||||||||||||| |||||   ||||| |||| |||||||| || |||||||| |||||||||||| | |||||||| |||||||    
T  30261956 tgtttcaggtgaatcaaaacaatctcaaccctag---tgtttattgccaagagaaaactctataaaccgtagtttgttgttggcttctaaaccatgtttt 30262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 30720695 - 30720747
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  30720695 aaaagatttcaaagggttacaagaattagtcttcaaacctaattctacccaaa 30720747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 13828404 - 13828479
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||| |||||||| |||||||  || ||||||||||||| ||||||||| ||||||||||| ||||||||| ||||    
T  13828404 tataattatgagtaattttacaa--aagagatatcaaagggctacaagaataagtcttcaaacataattctacccaaa 13828479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 20589885 - 20589810
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||| ||||  || ||||||||| |||||| |||||| ||||| ||||||||||||||| ||||    
T  20589885 tataatgatgagtaacttcacaa--aagagatatcaatgggttaaaagaataagtctccaaacctaattctacccaaa 20589810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 17897307 - 17897361
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| |||||    
T  17897307 tataatgatgagtaactttacaa--aatagatatcaaagggttacaagaataagtct 17897361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 28458924 - 28458964
Alignment:
Q  53 agggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  28458924 agggttacaagaatcagtcttcaaacctaattctacccaaa 28458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 33604115 - 33604048
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattct 86  Q
    |||||||||||||||||||||||   | | |||||||| ||||| |||||| |||||||||||||||||||    
T  33604115 tataatgatgagtaactttacaa---agatatatcaaaaggttagaagaattagtcttcaaacctaattct 33604048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 41303095 - 41303168
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||    |||||  |||| ||||||| |||||||||||||||| ||||||||| ||||    
T  41303095 tataatgatgagtaactttacaa----aagattccaaaaggttacatgaatcagtcttcaaacataattctacccaaa 41303168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 6264210 - 6264264
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  6264210 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 6264264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20146670 - 20146724
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||||||||| |||||    
T  20146670 tataatgatgagtaactttaca--aaagagatatcaaagagttacaagaataagtct 20146724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 27136195 - 27136261
Alignment:
Q  25 gagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||  || ||||||||| | ||||||||||| ||||| ||||||||||||||| ||||    
T  27136195 gagtaactttacaa--aagagatatcaatgagttacaagaataagtctccaaacctaattctactcaaa 27136261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 27248228 - 27248276
Alignment:
Q  264 tatttatagagaaataaaacccttaaaatttacaacaaatctcacgctga 313  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  27248228 tatttatagagaaataaaaccc-tcaaatttagaacaaatctcacgctga 27248276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 27517822 - 27517924
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  27517822 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgcaaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 27517917  T
Q  231 tttctac 237  Q
    |||||||    
T  27517918 tttctac 27517924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 30478993 - 30478891
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  30478993 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaactctgtt 30478898  T
Q  231 tttctac 237  Q
    |||||||    
T  30478897 tttctac 30478891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 31732839 - 31732912
Alignment:
Q  17 ataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||| ||  |||||||||||| ||||    
T  31732839 ataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtc-tcccacctaattctacccaaa 31732912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 35894444 - 35894546
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  35894444 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 35894539  T
Q  231 tttctac 237  Q
    |||||||    
T  35894540 tttctac 35894546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 12781404 - 12781444
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  12781404 tgtttaaggtgaatcaaaacaatcccaaccctagtgttgtt 12781444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 17932717 - 17932685
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  17932717 gttacaagaatcagtcttcaaacctaattctac 17932685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 20054864 - 20054896
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  20054864 gttacaagaatcagtcttcaaacctaattctac 20054896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 27517738 - 27517770
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  27517738 gttacaagaatcagtcttcaaacctaattctac 27517770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 30261860 - 30261907
Alignment:
Q  46 atatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||| ||||||||||| |||||| |||||||||||||| ||||    
T  30261860 atatcaaagagttacaagaattagtcttgaaacctaattctacccaaa 30261907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 6258878 - 6258952
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||| ||||||||||||||||  || ||||||||| ||||||||||||| |||| ||  |||||||||||| ||||    
T  6258878 tataataatgagtaactttacaa--aagagatatcaatgggttacaagaataagtc-tcccacctaattctacccaaa 6258952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 28568499 - 28568453
Alignment:
Q  38 acaaaaagatatcaaa-gggttacaagaatcagtcttcaaacctaat 83  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  28568499 acaaagagatatcaaaagggttacaagaatcagtcttcaatcctaat 28568453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 30720934 - 30721025
Alignment:
Q  258 gatctatatttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatacgttt---attttctccttcaacgcaaaaat 347  Q
    ||||| |||||||| |||||||| ||||| |||||| | ||||||||||||||  | |||||| |||    ||||||||||||||||||||||    
T  30720934 gatctgtatttataaagaaataacaccctcaaaattaagaacaaatctcacgc-caaaaatacattttaatttttctccttcaacgcaaaaat 30721025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 41304531 - 41304577
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    |||||||  |||| |||||||||||||||||||||||| ||||||||    
T  41304531 aaaagattccaaaaggttacaagaatcagtcttcaaacataattcta 41304577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 43139568 - 43139499
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||   | ||| |||||| |||||||| ||| |||||| | ||||||||||||    
T  43139568 tataatgatgagtaactttacaa---agagaaatcaaaaggttacaataattagtctttagacctaattctac 43139499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 17921863 - 17921818
Alignment:
Q  48 atcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||| ||||||||||| || |||||||||||||| ||||    
T  17921863 atcaaagggttgcaagaatcagttttaaaacctaattctacccaaa 17921818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 17932633 - 17932531
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||||||    |||||| |||||||| ||| |||||| |||||||||| |||| |||| |||||  ||||    
T  17932633 tgttcaaggtgaatcaaaacaatcccaaccctagtgt----tgttgccaagagaaattctctataaaccctagtttgtatgttggtttataaaccctgtt 17932538  T
Q  231 tttctac 237  Q
    |||||||    
T  17932537 tttctac 17932531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 18800375 - 18800429
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||| ||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  18800375 tataatgacgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 18800429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 22712699 - 22712801
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||| |    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  22712699 tgttcaaggtgaatcaaaacaatcccaaccctagag----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 22712794  T
Q  231 tttctac 237  Q
    |||||||    
T  22712795 tttctac 22712801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22874324 - 22874270
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||| ||| |||||    
T  22874324 tataatgatgagtaactttaca--aaagagatatcaatgggttacaaaaataagtct 22874270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 28459251 - 28459305
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||| ||  || ||||||||| ||||||||||||| |||||    
T  28459251 tataatgatgagtaactttaaaa--aagagatatcaatgggttacaagaataagtct 28459305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 33674588 - 33674690
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaacc-tagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||||| |||||| | |||| ||||||||||  ||||    
T  33674588 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccatagtttatatgttggtttctaaaccctgtt 33674683  T
Q  231 tttctac 237  Q
    |||||||    
T  33674684 tttctac 33674690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 43482918 - 43482984
Alignment:
Q  17 ataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    |||| |||||||||||||||||    | ||| |||||||||||||||||||| ||||||||| ||| ||||    
T  43482918 ataacgatgagtaactttacaa----aggatttcaaagggttacaagaatcactcttcaaacttaaatcta 43482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 2736284 - 2736256
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  2736284 caagaatcagtcttcaaacctaattctac 2736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 17462515 - 17462487
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  17462515 caagaatcagtcttcaaacctaattctac 17462487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 17943536 - 17943496
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  17943536 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 17943496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 17943620 - 17943588
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||| |||||||||||||||||||||    
T  17943620 gttacaagaattagtcttcaaacctaattctac 17943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 20050121 - 20050149
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaatt 84  Q
    |||||||||||||||||||||||||||||    
T  20050121 gttacaagaatcagtcttcaaacctaatt 20050149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 26345777 - 26345725
Alignment:
Q  41 aaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||  ||| ||||| ||||||||||||||||||| ||||||||| ||||    
T  26345777 aaaagattccaatgggtttcaagaatcagtcttcaaacttaattctacccaaa 26345725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 30479073 - 30479045
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  30479073 caagaatcagtcttcaaacctaattctac 30479045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 33671070 - 33671098
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  33671070 caagaatcagtcttcaaacctaattctac 33671098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 37170851 - 37170883
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||| |||||||||||||||||||||||||    
T  37170851 gttacaaaaatcagtcttcaaacctaattctac 37170883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 38190996 - 38190956
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  38190996 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 38190956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 38191080 - 38191048
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||| |||||||||    
T  38191080 gttacaagaatcagtcttcaaacttaattctac 38191048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 39687062 - 39687034
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  39687062 caagaatcagtcttcaaacctaattctac 39687034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 40032115 - 40032193
Alignment:
Q  16 tataatgatgagtaactttacaacaaa--aagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||| ||| | |  |||||||||| ||||||||||||| |||| |||  ||||||||||| ||||    
T  40032115 tataatgatgagtaactttgcaaaagagaaagatatcaatgggttacaagaataagtc-tcacgcctaattctacccaaa 40032193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 45567488 - 45567460
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  45567488 caagaatcagtcttcaaacctaattctac 45567460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 45679802 - 45679774
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  45679802 caagaatcagtcttcaaacctaattctac 45679774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 6046721 - 6046647
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    |||||||||||||||||||||||   | |||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  6046721 tataatgatgagtaactttacaa---agagatatcaaaggtttacaagaataagtcttcaaacctaattctacccaaa 6046647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 6332448 - 6332378
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||  || |||||| |||||||||||||||| ||||||||| |||||||||||    
T  6332448 tataatgatgagtaactttacaa--aagagatattaaagggttacaagaataagtcttcaagcctaattctac 6332378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 13290536 - 13290605
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||   | |||||||||| |||||||||||| | |||||||||||||||||||    
T  13290536 tataatgatgagtaactttacaa---agagatatcaaaaggttacaagaattattcttcaaacctaattctac 13290605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 31435108 - 31435182
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||||  |||||||||||| ||||    
T  31435108 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtcttc-cacctaattctacccaaa 31435182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 6049098 - 6049030
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    |||||||||||||||||||||||   |  ||||||||||||||| ||||||  |||||||||||||||||||    
T  6049098 tataatgatgagtaactttacaa---agggatatcaaagggttataagaatacgtcttcaaacctaattcta 6049030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 26210737 - 26210700
Alignment:
Q  51 aaagggttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26210737 aaagggttacaagaatcagtcttcaaacctaattctac 26210700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 11081731 - 11081659
Alignment:
Q  22 gatgagtaactttacaacaaaaagatatcaaa--gggttacaagaatcagtcttcaaacctaattctacacaaaa 94  Q
    ||||||||||||||||   || ||||||||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  11081731 gatgagtaactttacac--aagagatatcaaaaagggttacaagaattagtcttcaaacctaattttacacaaaa 11081659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 16297084 - 16297160
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaa-gggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||| |||  || |||||| ||| ||||||||||||||| |||||||| |||||||||| ||||    
T  16297084 tataatgatgagtaactttgcaa--aagagatattaaaagggttacaagaatcaatcttcaaatctaattctacccaaa 16297160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 13099536 - 13099585
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  13099536 tataatgatgagtaactttacaa-aaagagatatcaatgggttacaagaat 13099585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 34547045 - 34547148
Alignment:
Q  133 ctgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgt 229  Q
    ||||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  |||    
T  34547045 ctgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgt 34547140  T
Q  230 ttttctac 237  Q
    ||||||||    
T  34547141 ttttctac 34547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 6067281 - 6067330
Alignment:
Q  38 acaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattcta 87  Q
    ||||| |||||||| ||| |||||||||| ||||||||||||||||||||    
T  6067281 acaaagagatatcagaggattacaagaattagtcttcaaacctaattcta 6067330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20137170 - 20137224
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  20137170 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 20137224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22393950 - 22393896
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  22393950 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 22393896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 26295675 - 26295621
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  26295675 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 26295621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 40281468 - 40281505
Alignment:
Q  48 atcaaagggttacaagaatcagtcttcaaacctaattc 85  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  40281468 atcaaagggttacaagaataagtcttcaaacctaattc 40281505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 2120982 - 2120950
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  2120982 gttacaagaatcagtcttcaaacctaattctac 2120950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 25351352 - 25351312
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  25351352 tgttcaaggtgaatcaaaacaatctcaaccctagtgttgtt 25351312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 25351436 - 25351404
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  25351436 gttacaagaatcagtcttcaaacctaattctac 25351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 25357046 - 25357006
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  25357046 tgttcaaggtgaatcaaaacaatctcaaccctagtgttgtt 25357006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 25357130 - 25357098
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  25357130 gttacaagaatcagtcttcaaacctaattctac 25357098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 25410213 - 25410181
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  25410213 gttacaagaatcagtcttcaaacctaattctac 25410181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 44512624 - 44512656
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  44512624 gttacaagaatcagtcttcaaacctaattctac 44512656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 88
Target Start/End: Original strand, 7392851 - 7392882
Alignment:
Q  57 ttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||||    
T  7392851 ttacaagaatcagtcttcaaacctaattctac 7392882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 8260454 - 8260396
Alignment:
Q  265 atttatagagaaataaaacccttaaaatttacaacaaatctcacgctgagaaatacgttt 324  Q
    |||||||||||||||||||| | ||||||   ||||||||||||||||| ||||||||||    
T  8260454 atttatagagaaataaaaccatcaaaattaggaacaaatctcacgctga-aaatacgttt 8260396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 8260676 - 8260621
Alignment:
Q  49 tcaaagggttacaagaatcagtcttcaaacctaattctacacaaaagccagaatct 104  Q
    |||||||| ||||||||||| |||||||||| ||||||| |||||| ||| |||||    
T  8260676 tcaaagggctacaagaatcaatcttcaaacccaattctatacaaaatccaaaatct 8260621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 22251607 - 22251665
Alignment:
Q  16 tataatgatgagtaactttac--aacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||||  || | ||||||||||| ||||||||||||| |||||    
T  22251607 tataatgatgagtaactttacaaaagagaaagatatcaatgggttacaagaataagtct 22251665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 24258690 - 24258643
Alignment:
Q  17 ataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    |||||||||||||||||||||  ||| ||||||||| |||||||||||||    
T  24258690 ataatgatgagtaactttaca--aaagagatatcaatgggttacaagaat 24258643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 44143965 - 44143995
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattct 86  Q
    |||||||||||||||||||||||||||||||    
T  44143965 gttacaagaatcagtcttcaaacctaattct 44143995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 6348788 - 6348747
Alignment:
Q  262 tatatttatagagaaataaaacccttaaaatttacaacaaat 303  Q
    ||||||||||||||||||||||||| |||||||  |||||||    
T  6348788 tatatttatagagaaataaaaccctcaaaatttgaaacaaat 6348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 8378687 - 8378789
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| ||||| |    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  8378687 tgttcaaggtgaatcaaaacaatcccaaccctagag----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtt 8378782  T
Q  231 tttctac 237  Q
    |||||||    
T  8378783 tttctac 8378789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 9679283 - 9679233
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  9679283 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 9679233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 20091610 - 20091660
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  20091610 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 24748822 - 24748768
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||||||||| |||||    
T  24748822 tataatgatgagtaaccttacaa--aagagatatcaatgggttacaagaataagtct 24748768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 25276369 - 25276315
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| || |||||||||| |||||    
T  25276369 tataatgatgagtaactttaca--aaagagatatcaatggtttacaagaataagtct 25276315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 27832694 - 27832748
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||   || ||||||||| ||||||||||||| |||||    
T  27832694 tataatgatgagtaactttaca--gaagagatatcaatgggttacaagaataagtct 27832748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 1099725 - 1099757
Alignment:
Q  142 gtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||||||||||||||||||| ||||||||||||    
T  1099725 gtgaatcaaaacaatctcaaccctagtgttgtt 1099757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 3320153 - 3320181
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  3320153 caagaatcagtcttcaaacctaattctac 3320181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 3324901 - 3324929
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  3324901 caagaatcagtcttcaaacctaattctac 3324929  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 7069859 - 7069831
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  7069859 caagaatcagtcttcaaacctaattctac 7069831  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 7074866 - 7074838
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  7074866 caagaatcagtcttcaaacctaattctac 7074838  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 8378607 - 8378635
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  8378607 caagaatcagtcttcaaacctaattctac 8378635  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 25405472 - 25405444
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  25405472 caagaatcagtcttcaaacctaattctac 25405444  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 25410129 - 25410089
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  25410129 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 25410089  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 30247053 - 30247021
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||| ||||||||||||||||||||    
T  30247053 gttacaagaatcggtcttcaaacctaattctac 30247021  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 37412187 - 37412242
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||| |||||| ||| ||||||||| | ||||||||||| |||||    
T  37412187 tataatgatgagtaaccttacaa-aaagagatatcaatgagttacaagaataagtct 37412242  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 42006746 - 42006714
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    ||||||| |||||||||||||||||||||||||    
T  42006746 gttacaaaaatcagtcttcaaacctaattctac 42006714  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 44010849 - 44010885
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctacacaa 92  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  44010849 gttacaagaatcagtctccaaacctaattttacacaa 44010885  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 57497 - 57557
Alignment:
Q  23 atgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattc 85  Q
    ||||||||||||||||  || |||||||||||||||||||||||   ||||||||||||||||    
T  57497 atgagtaactttacaa--aatagatatcaaagggttacaagaatagatcttcaaacctaattc 57557  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 16712 - 16766
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  16712 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 16766  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 188425 - 188527
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaa-tctatataaa-cctagtttgt-tgtttgtttctaaacaatgtt 230  Q
    |||| ||||||||||||||||||| ||| |||||||    ||||||| |||||||| ||| |||||| |||||||||| |||| ||||||||||  ||||    
T  188425 tgttcaaggtgaatcaaaacaatcccaaccctagtg----ttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtt 188520  T
Q  231 tttctac 237  Q
    |||||||    
T  188521 tttctac 188527  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 188341 - 188373
Alignment:
Q  56 gttacaagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||||||    
T  188341 gttacaagaatcagtcttcaaacctaattctac 188373  T

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Target: scaffold0474 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 10822 - 10754
Alignment:
Q  21 tgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtcttcaaacctaattctacacaaa 93  Q
    ||||||||||||||||||    ||||| |||||||||||||||||| |||||| |||| ||| ||||| ||||    
T  10822 tgatgagtaactttacaa----aagatttcaaagggttacaagaattagtctttaaacttaagtctacccaaa 10754  T

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Target: scaffold0468 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 1704 - 1752
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaat 66  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||||||||    
T  1704 tataatgatgagtaactttaca--aaagagatatcaatgggttacaagaat 1752  T

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Target: scaffold0224 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 15885 - 15937
Alignment:
Q  18 taatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||||||| |||||    
T  15885 taatgatgagtaactttaca--aaagagatatcaatgggttacaagaataagtct 15937  T

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Target: scaffold0477 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 7079 - 7108
Alignment:
Q  59 acaagaatcagtcttcaaacctaattctac 88  Q
    ||||||||||||||||||||||||||||||    
T  7079 acaagaatcagtcttcaaacctaattctac 7108  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 4219 - 4169
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  4219 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 4169  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 15242 - 15192
Alignment:
Q  20 atgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||| |||||    
T  15242 atgatgagtaactttacaa--aagagatatcaatgggttacaagaataagtct 15192  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 85457 - 85403
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    ||||||||||||||||||||| |  || ||||||||| ||||||||||||| |||||    
T  85457 tataatgatgagtaactttacga--aagagatatcaatgggttacaagaataagtct 85403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 16324 - 16284
Alignment:
Q  134 tgtttaaggtgaatcaaaacaatctcaatcctagtgttgtt 174  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  16324 tgttcaaggtgaatcaaaacaatcccaaccctagtgttgtt 16284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 17089 - 17117
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  17089 caagaatcagtcttcaaacctaattctac 17117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 5038 - 4983
Alignment:
Q  16 tataatgatgagtaactttacaacaaaaagatatcaaagggttacaagaatcagtct 72  Q
    |||||||||||||| |||||||| ||| ||||||||| ||||||||| ||| |||||    
T  5038 tataatgatgagtatctttacaa-aaagagatatcaatgggttacaaaaataagtct 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 224898 - 224870
Alignment:
Q  60 caagaatcagtcttcaaacctaattctac 88  Q
    |||||||||||||||||||||||||||||    
T  224898 caagaatcagtcttcaaacctaattctac 224870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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