View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10597_high_1 (Length: 316)
Name: NF10597_high_1
Description: NF10597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10597_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 8629634 - 8629324
Alignment:
| Q |
1 |
ttttccctacgaatcgaaacaactaagagctgaatctcacaataccttagctttctcgagtcgcttaacggcgacacgatctccattagatttatcaaca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
8629634 |
ttttccctacgaatcgaaacaactaagagctgaatctcacaataccttagctttctcgagtcgcttaacggcgacacgatctccattggatttatcaaca |
8629535 |
T |
|
| Q |
101 |
ccaacataagtataaccaaattgtccatgacccaacaatttcccaagagaaaatctcttatcaaaatctttctcatacccaaaatccgttctttttccac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8629534 |
ccaacataagtataaccaaattgtccatgacccaacaatttcccaagagaaaatcttttatcaaaatctttctcatacccaaaatccgttctttttccac |
8629435 |
T |
|
| Q |
201 |
aaggaacatgtttagaacctgttttctcttttaacctatgatgttgatgatgattcttcttctgggctgtttcatttgaccctcctttacgtctctgtgc |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8629434 |
aaggaacatgtttagaacctgttttctcttttaacctatgatgttgatgatgattcttcttctgggctgtttcatttgaccctcctttacgtctctgtgc |
8629335 |
T |
|
| Q |
301 |
cctttgcttct |
311 |
Q |
| |
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| |||| |||| |
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|
| T |
8629334 |
cgtttgtttct |
8629324 |
T |
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