View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10598_low_3 (Length: 357)
Name: NF10598_low_3
Description: NF10598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10598_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 43756869 - 43757200
Alignment:
| Q |
14 |
cagttttcccaactagactgcatcctcgtcaccaatgatcaccacatgaacacataccatgtttaaaactatgatagcgattaacgtctcttacagtaat |
113 |
Q |
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| T |
43756869 |
cagttttcccaactagactgcatccttgtcaccaatgatcgccacatgaacacataccatgtttaaaactatgatagcgattaacgtctcttacagtaat |
43756968 |
T |
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| Q |
114 |
ttccctctccataatctttgagatgaacttaatagcaacatggcagtcctcacaaattcggagattctttgttattaaaagccgggttcctggcgatgta |
213 |
Q |
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| T |
43756969 |
ttccctctccataatctttgagatgaacttaatagcaacatggcagtcctcacaaattcggagattctttgttattaaaagccgggttcctggcgatgta |
43757068 |
T |
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| Q |
214 |
cttatgagtccaaatgcaatagctagtctttcactgtgactgcacaccatacttgttttctcatcttcctccacgtcgtgaaaaacagatcctgtatctg |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43757069 |
cttatgagtccaaatgcaatagctagtctttcactgtgactgcacaccatacttgttttctcatcttcctccacgtcgtgaaaaacagatcctgtatctg |
43757168 |
T |
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| Q |
314 |
gggcatatccagcttcatgcattagtccttct |
345 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
43757169 |
gggcatatccagcttcatgcattagtccttct |
43757200 |
T |
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