View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10599_low_14 (Length: 316)
Name: NF10599_low_14
Description: NF10599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10599_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 33719208 - 33718916
Alignment:
| Q |
17 |
atgtatgatacaaaatctcaaatgtttccttttaaataaacgttaacactagatat-----aagg-ttttccatctaaaattgagtaaatgagcatttca |
110 |
Q |
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||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |
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| T |
33719208 |
atgtacgatacaaaatctcaaatgtttccttttaaataaacattaacacgagatatattacaaggtttttccatctaaaattgagtaaatgagcatttcg |
33719109 |
T |
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| Q |
111 |
ttctcaaaatcgtaagggtcgatcaatttagtcactcaaatatacgaaatagcaaactagtcgcttaaataaattaaaaaatgtcaatcaatttagtttc |
210 |
Q |
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|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
33719108 |
ttctcaaaattgtaagggtcgagcaatttagtcactcaaatatacgaaatagcaaactagtcgcttaaataaattaaaaaatgtcaatcaatttagtctc |
33719009 |
T |
|
| Q |
211 |
tccaccataattaatatctcatgctatatttagtcccttaaatcaatactcatgctatatttggtaaaatgcatagaaaataaaaaacatacc |
303 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33719008 |
tccatcataattaatatctcatgctatatttagtcccttaaatcaatactcatgctatatttggtaaaatgcatagaaaataaaaaacatacc |
33718916 |
T |
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