View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10599_low_15 (Length: 296)
Name: NF10599_low_15
Description: NF10599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10599_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 15 - 283
Target Start/End: Complemental strand, 35770390 - 35770122
Alignment:
| Q |
15 |
atatataccttttgctagatcaagtagaacatcagtaggatttatggcgacagacagagaagtaattcataacatctgctaatagtaaaatcttctgaaa |
114 |
Q |
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| T |
35770390 |
atatataccttttgctagatcaagtagaacatcagtaggatttatggcgacagacagagaagtaattcataacatctgctaacagtaaaatcttctgaaa |
35770291 |
T |
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| Q |
115 |
catgtgaaagagtttgctagaaggttgatgtatagtcattatgacagttcttccacctttagctaactcacacaaattcatcacaattctctttgctgtg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35770290 |
catgtgaaagagtttgctagaaggttgatgtatagtcattatgacagttcttccacctttagctaactcacacaaattcatcacaattctctttgctgtg |
35770191 |
T |
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| Q |
215 |
gttgaatcaagacctttagtaggctcatcaacaagcaatagacttgaattagttgacagctcttgtcct |
283 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
35770190 |
gttgaatcaagacatttagtaggctcatcaacaagcaatagacttgaattagttaacagctcttgtcct |
35770122 |
T |
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