View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10601_high_2 (Length: 329)
Name: NF10601_high_2
Description: NF10601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10601_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 9897828 - 9898143
Alignment:
| Q |
1 |
tcattatgaagcatgaccgaacaaggtttagcttcccctgcaccttggtttggatctaagacaatgtagatatttaccagcacgactaaattacactggg |
100 |
Q |
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| T |
9897828 |
tcattatgaagcatgaccgaacaaggtttagcttcccctgccccttggtttggatctaagacaatgtagatatttaccagcacgactccattgcactggg |
9897927 |
T |
|
| Q |
101 |
gtggctagccctgatgacaagtcaattgtttgtattacatccctattatagcctagccatttttgaatatggtcgacatggaatgtttgattctttggcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9897928 |
gtggctagccctgatgacaagtcaattgtttgtattacatccctattatagcctagccatttttgaatatggtcgacatggaatgtttgattctttggcc |
9898027 |
T |
|
| Q |
201 |
actccattatagccaaatcgcttaagaatgtggtagacttacgaggtttagttctttgaccactccattataacctattcatttaagaacggggttgact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
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| T |
9898028 |
actccattatagccaaatcgcttaagaatgtggtagacttacgaggtttagttctttgaccactccattatagcctattcatttaagaacggggtcgact |
9898127 |
T |
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| Q |
301 |
ctgaaggttttcttct |
316 |
Q |
| |
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|||||||||| |||| |
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| T |
9898128 |
ttgaaggttttattct |
9898143 |
T |
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