View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10601_low_11 (Length: 246)
Name: NF10601_low_11
Description: NF10601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10601_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 47469520 - 47469279
Alignment:
| Q |
1 |
tctctattatcagcaccgtattgacaccactgttcccattgaggacactgtaagtaatagaatctattcttaaaatttgttaggaagtggtaggtaggta |
100 |
Q |
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| T |
47469520 |
tctctattatcagcaccgtattgacaccactgttcccattgaggacactgtaagtaatagaatctattcttaaaatttgttaggaagtggtaggtaggta |
47469421 |
T |
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| Q |
101 |
ctagtgtttttgatttggtgttttgaatgaatcacagatgggagagcttaagaagttggttgaagagggaaagattaagtacataggattatctgaggct |
200 |
Q |
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| T |
47469420 |
ctcgtgtttttgatttggtgttttgaatgaatcacagatgggagagcttaagaagttggttgaagagggaaagattaagtacataggattatctgaggct |
47469321 |
T |
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| Q |
201 |
agtactgatacaatcagaagggcacatgatgtccatctcatt |
242 |
Q |
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| T |
47469320 |
agtactgatacaatcagaagggcacatgctgttcatcccatt |
47469279 |
T |
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