View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10601_low_14 (Length: 238)
Name: NF10601_low_14
Description: NF10601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10601_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 47469521 - 47469727
Alignment:
| Q |
1 |
tcaatgtaatccaccccaagacgttgaagactaccctcacaacatgatcgaacatattcaggactaccatttactacaacgttaccagattccattttga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47469521 |
tcaatgtaatccaccccaagacgttgaagactaccctcacaacatgatcgaacatattcaggactaccatttactacaacgttaccagattccattttga |
47469620 |
T |
|
| Q |
101 |
caatcccaaactttgtagcaatctgaatttgatctcgtggtatgtcctttagtgcctgagaattgttaaaatgtttatgttacatcatttttgttatgct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47469621 |
caatcccaaactttgtagcaatctgaatttgatctcgtggtatgtccttaagtgcctgagaattgttaaaatgtttatgttacatcatttttgttatgct |
47469720 |
T |
|
| Q |
201 |
aaaacat |
207 |
Q |
| |
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||||||| |
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| T |
47469721 |
aaaacat |
47469727 |
T |
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