View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_high_17 (Length: 314)
Name: NF10602_high_17
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 10685018 - 10684726
Alignment:
| Q |
1 |
gaacaattttttgaggcagaaagtggttgtcgggtctgtgacatcagggtttttgagttcaacagatgaggctgagctttgtttatgtctcaaggtaaat |
100 |
Q |
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| T |
10685018 |
gaacaattttttgaggcagaaggtggttgtagggtctgtgacatcagggtttttgagttcaacagatgaggctgagctttgtttatgtctcaaggtatat |
10684919 |
T |
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| Q |
101 |
gtggtaaataaatatgatcttatcttatatctaatgttataaaagagataagataagctcaaaatgtaaattaagaatacactgaaccatcatttcagtc |
200 |
Q |
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||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
10684918 |
gtggtaaataagtatgatcttatcttatatcttatattataaaagagataagataagctcaaaatgttaattaagaatacactgaaccatcatttcagtc |
10684819 |
T |
|
| Q |
201 |
cctaacattgtagacattaataggacaatttcagaaactattttgatttattcaaaataagtattttaaaatactaataatttctgagactga |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
10684818 |
cctaacattgtagacattaataggacaatttcagaaactattttgatttattcaaaataagtattttaaaatactaataatttcagagactga |
10684726 |
T |
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