View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_high_48 (Length: 242)
Name: NF10602_high_48
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 21878426 - 21878190
Alignment:
| Q |
1 |
atttaacagaattgtataaagctacgtagcaccaacactcgacaatatgtattgaaagcgtgaacaaatatctgacacatgaacatacaatcatttcaat |
100 |
Q |
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| T |
21878426 |
atttaacagaattgtataaagctacgtagcaccaacactcgacaatatgtattgaaagcgtgaccaaatatctgacacatgaacatacaatcatttcaat |
21878327 |
T |
|
| Q |
101 |
ttttcaaactattaccgatgtttgagtctgttcttggtcagtgcatcataggaaaaaagattggtataaaaagaatttacataatctcaatactcacctc |
200 |
Q |
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|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21878326 |
ttttcaaactattaccaatgtttgagtctgtttttggtcagtgcatcataggaaaaaagattggtataaaaagaatttacataatctcaatactcacctc |
21878227 |
T |
|
| Q |
201 |
cttaacctcctcttcagataacctaccatctccattc |
237 |
Q |
| |
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||||||||||||||| ||||||||||||||||||||| |
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| T |
21878226 |
cttaacctcctcttcggataacctaccatctccattc |
21878190 |
T |
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