View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_low_113 (Length: 213)
Name: NF10602_low_113
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_low_113 |
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Alignment Details
Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 12682645 - 12682727
Alignment:
| Q |
10 |
tgagaagaagaaacgtaaacgaccatcaaacagtgcttacgtagatataaacgacaccactgtttctgtttcaaccggtttaa |
92 |
Q |
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| T |
12682645 |
tgagaaaaagaaacgtaaacgaccatcaaacagtgcttacgtagatataaacgacaccactgtttctgtttcatccggtttaa |
12682727 |
T |
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Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 12682788 - 12682834
Alignment:
| Q |
153 |
ttcagttaccacaaaacatggttcctgtttgggctataccatcaaac |
199 |
Q |
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| T |
12682788 |
ttcagttaccacaaaacatggttcctgtttgggctataccatcaaac |
12682834 |
T |
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