View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_low_29 (Length: 309)
Name: NF10602_low_29
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 29071484 - 29071203
Alignment:
| Q |
18 |
gatagaactgagctagttttatcaatcaaatttttctccatattggtttgtttcatgttagctttcttgttaaatgttcaatctataaggtactatagtc |
117 |
Q |
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| T |
29071484 |
gatagaactgagctagttttatcaatcaaatttttctccatattggtttgtttcatgttagctttcttgttgaatgttcaatctataaggtactatagtc |
29071385 |
T |
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| Q |
118 |
atgcaagcattctcatcaatgttcctttcaagaaactgtcatcaaaccttagacaacagaagctgacagctgagtatgttgccaatacagttaaccgtgg |
217 |
Q |
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|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29071384 |
atgcaagcatactcatcaatgttcctttcaagaaactatcatcaaaccttagacaacagaagctgacagctgagtatgttgccaatacagttaaccgtgg |
29071285 |
T |
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| Q |
218 |
aagctatttctggtcacttggtttgcgtgcattttacttttccttccctcttttcatgtggatctttggacctattcctatg |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29071284 |
aagctatttctggtcacttggtttgcgtgcattttacttttccttccctcttttcatgtggatctttggacctattcctatg |
29071203 |
T |
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