View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_low_30 (Length: 305)
Name: NF10602_low_30
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 17 - 290
Target Start/End: Original strand, 39775429 - 39775702
Alignment:
| Q |
17 |
aattttgatcttacaagcgatgtttaattaagcatgaccgtactctactttaaggtatcatgctcttgtcgttataatgcctttcaatctattttgagtt |
116 |
Q |
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| T |
39775429 |
aattttgatcttacaagcgatgtttaattaagcatgaccgtactctactttaaggtatcatgctcttgtcgttataatgcctttcaatctattttgagtt |
39775528 |
T |
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| Q |
117 |
gtctcttgttggattgatcattgaaaacaaaaataatagcaatggttttattttgtggggtagtccttatttgatggatcgatggacatgaaatgtttgt |
216 |
Q |
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| T |
39775529 |
gtcccttgttggattgatcattgaaaacaaaaataatagcaatggttttattttgtggggtagtccttatttgatggatcgatggacatgaaatgtttgt |
39775628 |
T |
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| Q |
217 |
gcaattgtgctgcattatttggatacccaacccaacaaagttcctttgaataaatcatcatgaaaatgatttat |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39775629 |
gcaattgtgctgcattatttggatacccaacccaacaaagttcctttgaataaatcatcatgaaaatgatttat |
39775702 |
T |
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