View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_low_55 (Length: 256)
Name: NF10602_low_55
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_low_55 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 42685012 - 42685256
Alignment:
| Q |
1 |
ttaagctttctctcttgattttcttaggatcttgttgtggactaagatagacttgagaaaagggtggaaattatggtttatcgttgaagttaattacttg |
100 |
Q |
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| T |
42685012 |
ttaagctttctctcttgattttcttaggatcttgttgtggactaagatagacttgagaaaagggtggaaattatggtttatcgttgaagttaattacttg |
42685111 |
T |
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| Q |
101 |
tagcctctttacatcccctgtaaggactcactcgtagtggtttggagagctattctccccgcagacgaaggtcagtttaagccaaactgggaaataatag |
200 |
Q |
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|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
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| T |
42685112 |
taacctctttacattccctgtaaggactcactcgtagtggtttggagagctattctccccgcagacgaaggtcaatttaaggcaaactgggaaataatag |
42685211 |
T |
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| Q |
201 |
tattatattagtgtttttgttcctctactctcttatctctgttct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42685212 |
tattatattagtgtttttgttcctctactctcttatctctgttct |
42685256 |
T |
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