View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_low_73 (Length: 241)
Name: NF10602_low_73
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_low_73 |
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Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25829756 - 25829852
Alignment:
| Q |
1 |
tgatgtttgaaggaattggagttacatgttctgaagaagagtttcctgctcatcaaatgcctgataaaagattagtctgagttaagaatagtatagtt |
98 |
Q |
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| T |
25829756 |
tgatgtttgaaggaattggagttacatgttctgaagaagagtttcctgctcatcaaatgcttg-taaaagattagtctgagttaagaatagtatagtt |
25829852 |
T |
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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 30627394 - 30627480
Alignment:
| Q |
99 |
gtgtggtttgtgatggctatcttgcaattactagaagc-taaggtgtatataattgtggattcaaactatattagtactttgatggtg |
185 |
Q |
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| T |
30627394 |
gtgtggtttgagacggcaatcttgcatttattagaggcattaggtgtatatcattgtggattc-aactatattagtattttgatggtg |
30627480 |
T |
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