View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10602_low_74 (Length: 241)

Name: NF10602_low_74
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10602_low_74
NF10602_low_74
[»] chr1 (58 HSPs)
chr1 (65-154)||(26344569-26344659)
chr1 (65-154)||(27507023-27507113)
chr1 (65-127)||(6248550-6248612)
chr1 (74-155)||(25559532-25559614)
chr1 (82-152)||(36781726-36781796)
chr1 (4-65)||(29273277-29273338)
chr1 (65-153)||(23474634-23474722)
chr1 (65-128)||(12974051-12974114)
chr1 (1-64)||(39649133-39649196)
chr1 (1-56)||(43361601-43361656)
chr1 (1-56)||(43361806-43361861)
chr1 (81-152)||(50471586-50471656)
chr1 (1-43)||(9381316-9381358)
chr1 (1-43)||(11590433-11590475)
chr1 (14-64)||(12314570-12314620)
chr1 (65-127)||(16063288-16063350)
chr1 (65-155)||(50951528-50951617)
chr1 (1-46)||(13959412-13959457)
chr1 (65-153)||(35375645-35375734)
chr1 (1-66)||(52846898-52846963)
chr1 (64-155)||(3937230-3937322)
chr1 (71-154)||(36202959-36203043)
chr1 (16-67)||(9380889-9380940)
chr1 (1-64)||(15392017-15392080)
chr1 (1-64)||(21538983-21539046)
chr1 (73-154)||(11072882-11072964)
chr1 (65-127)||(26063752-26063814)
chr1 (1-67)||(48558370-48558436)
chr1 (65-147)||(52380251-52380333)
chr1 (82-127)||(24630440-24630485)
chr1 (74-153)||(16537350-16537430)
chr1 (1-69)||(25799107-25799175)
chr1 (71-154)||(32909881-32909965)
chr1 (65-121)||(44056215-44056271)
chr1 (3-50)||(2997312-2997359)
chr1 (14-49)||(9381106-9381141)
chr1 (1-64)||(11581747-11581810)
chr1 (1-64)||(20429023-20429086)
chr1 (65-132)||(25507348-25507415)
chr1 (1-64)||(39648927-39648989)
chr1 (74-117)||(40094730-40094773)
chr1 (65-128)||(45949073-45949136)
chr1 (1-43)||(2697380-2697422)
chr1 (1-43)||(4022174-4022216)
chr1 (81-154)||(9961760-9961834)
chr1 (1-43)||(15391832-15391874)
chr1 (65-154)||(17652209-17652299)
chr1 (10-64)||(24382209-24382263)
chr1 (1-43)||(40521542-40521584)
chr1 (1-43)||(43423292-43423334)
chr1 (101-154)||(10847044-10847097)
chr1 (1-58)||(15391746-15391803)
chr1 (1-66)||(38871204-38871269)
chr1 (7-64)||(47086332-47086389)
chr1 (81-113)||(382553-382585)
chr1 (81-152)||(6693621-6693693)
chr1 (4-64)||(29265910-29265970)
chr1 (66-153)||(33770214-33770302)
[»] chr4 (55 HSPs)
chr4 (71-155)||(8485166-8485251)
chr4 (65-154)||(48653415-48653505)
chr4 (65-155)||(23449495-23449586)
chr4 (65-155)||(41325877-41325968)
chr4 (1-64)||(49380929-49380992)
chr4 (65-154)||(1564568-1564658)
chr4 (65-153)||(45983813-45983902)
chr4 (65-153)||(4642934-4643024)
chr4 (1-64)||(12016732-12016795)
chr4 (1-64)||(12016940-12017003)
chr4 (65-151)||(29233226-29233313)
chr4 (65-154)||(3999236-3999326)
chr4 (65-154)||(20986881-20986971)
chr4 (65-154)||(21069540-21069629)
chr4 (65-150)||(27743816-27743902)
chr4 (65-154)||(48338820-48338910)
chr4 (74-154)||(15986092-15986173)
chr4 (81-153)||(46471913-46471986)
chr4 (65-154)||(54273444-54273535)
chr4 (1-64)||(25753654-25753717)
chr4 (1-64)||(43943665-43943728)
chr4 (1-64)||(54210369-54210432)
chr4 (65-154)||(15724315-15724405)
chr4 (2-64)||(21498523-21498585)
chr4 (65-154)||(28148246-28148336)
chr4 (1-50)||(4645858-4645907)
chr4 (1-65)||(5488358-5488422)
chr4 (1-64)||(5065845-5065908)
chr4 (1-48)||(23018478-23018525)
chr4 (1-64)||(28497263-28497326)
chr4 (81-154)||(48292941-48293015)
chr4 (71-120)||(23119852-23119901)
chr4 (1-66)||(23350789-23350854)
chr4 (65-126)||(41260591-41260652)
chr4 (1-64)||(1923040-1923103)
chr4 (65-155)||(23625425-23625516)
chr4 (1-64)||(27634375-27634438)
chr4 (1-64)||(29113441-29113504)
chr4 (1-64)||(39110709-39110772)
chr4 (1-64)||(39110899-39110962)
chr4 (65-155)||(45464642-45464733)
chr4 (1-43)||(990560-990602)
chr4 (81-127)||(25686025-25686071)
chr4 (65-111)||(48685225-48685271)
chr4 (1-43)||(49544345-49544387)
chr4 (1-43)||(51469494-51469536)
chr4 (7-64)||(8560026-8560083)
chr4 (1-42)||(49380674-49380715)
chr4 (4-57)||(50307275-50307328)
chr4 (1-42)||(52810674-52810715)
chr4 (81-121)||(32222860-32222900)
chr4 (87-127)||(35014776-35014816)
chr4 (71-127)||(36106009-36106065)
chr4 (1-57)||(52827281-52827337)
chr4 (4-64)||(53559357-53559417)
[»] chr8 (36 HSPs)
chr8 (65-154)||(11219447-11219537)
chr8 (65-155)||(4785701-4785792)
chr8 (1-64)||(10989290-10989353)
chr8 (1-64)||(15011078-15011141)
chr8 (65-154)||(12659781-12659871)
chr8 (1-65)||(5720916-5720980)
chr8 (1-60)||(15010870-15010929)
chr8 (81-127)||(13325790-13325836)
chr8 (1-63)||(42228764-42228826)
chr8 (3-64)||(20760711-20760772)
chr8 (71-154)||(24681598-24681682)
chr8 (1-65)||(40902442-40902506)
chr8 (1-64)||(10989083-10989146)
chr8 (72-154)||(12192981-12193064)
chr8 (72-154)||(12437409-12437492)
chr8 (1-64)||(16454684-16454747)
chr8 (65-153)||(22810699-22810789)
chr8 (66-155)||(26774846-26774936)
chr8 (65-154)||(31477724-31477814)
chr8 (1-65)||(43599302-43599366)
chr8 (1-64)||(8559573-8559636)
chr8 (1-43)||(4195999-4196041)
chr8 (94-152)||(27675025-27675082)
chr8 (1-62)||(35561660-35561721)
chr8 (81-155)||(28072649-28072724)
chr8 (1-57)||(36039843-36039899)
chr8 (76-150)||(11017430-11017505)
chr8 (2-64)||(3895372-3895433)
chr8 (65-154)||(8036066-8036156)
chr8 (14-64)||(8559740-8559790)
chr8 (2-64)||(45122303-45122365)
chr8 (1-42)||(3183960-3184001)
chr8 (3-44)||(3538030-3538071)
chr8 (7-64)||(33435875-33435932)
chr8 (2-46)||(9596269-9596313)
chr8 (20-64)||(18313776-18313820)
[»] chr7 (52 HSPs)
chr7 (65-142)||(22299012-22299090)
chr7 (65-147)||(31287295-31287378)
chr7 (74-154)||(1812965-1813046)
chr7 (74-154)||(34751476-34751561)
chr7 (65-153)||(40849340-40849429)
chr7 (65-152)||(524381-524469)
chr7 (1-64)||(6782818-6782881)
chr7 (1-64)||(6783030-6783093)
chr7 (71-153)||(10338044-10338129)
chr7 (1-64)||(39808646-39808709)
chr7 (76-155)||(11833982-11834062)
chr7 (65-127)||(27100147-27100209)
chr7 (65-127)||(27178094-27178156)
chr7 (65-154)||(8568061-8568150)
chr7 (63-155)||(30855572-30855665)
chr7 (65-152)||(26956314-26956401)
chr7 (65-152)||(29628695-29628783)
chr7 (1-41)||(39808513-39808553)
chr7 (1-64)||(9378785-9378848)
chr7 (1-64)||(9378992-9379055)
chr7 (1-64)||(29252568-29252631)
chr7 (1-56)||(47856040-47856095)
chr7 (65-150)||(11399603-11399689)
chr7 (15-64)||(6214298-6214347)
chr7 (3-64)||(8681876-8681937)
chr7 (3-64)||(23396601-23396662)
chr7 (74-154)||(29211139-29211220)
chr7 (110-154)||(830881-830925)
chr7 (110-154)||(1196061-1196105)
chr7 (1-64)||(2179646-2179710)
chr7 (8-64)||(4258056-4258112)
chr7 (1-57)||(31374764-31374820)
chr7 (1-65)||(35866688-35866752)
chr7 (65-151)||(7697778-7697865)
chr7 (5-64)||(16565090-16565149)
chr7 (5-64)||(16600513-16600572)
chr7 (74-152)||(31011278-31011357)
chr7 (1-64)||(33833942-33834005)
chr7 (1-64)||(43366399-43366462)
chr7 (1-64)||(48113989-48114052)
chr7 (1-43)||(1661240-1661282)
chr7 (1-43)||(7135292-7135334)
chr7 (65-119)||(37376246-37376300)
chr7 (65-127)||(43202886-43202948)
chr7 (71-128)||(36874793-36874850)
chr7 (65-126)||(47484244-47484305)
chr7 (1-46)||(49040576-49040621)
chr7 (5-65)||(16564885-16564945)
chr7 (5-65)||(16600717-16600777)
chr7 (93-144)||(20335097-20335149)
chr7 (74-154)||(26208806-26208885)
chr7 (65-117)||(27456804-27456856)
[»] chr6 (30 HSPs)
chr6 (65-154)||(9686525-9686615)
chr6 (1-64)||(15101160-15101223)
chr6 (1-67)||(16877059-16877125)
chr6 (64-150)||(7169605-7169693)
chr6 (1-64)||(16590176-16590239)
chr6 (1-64)||(16605141-16605204)
chr6 (1-64)||(18494323-18494386)
chr6 (81-151)||(29049028-29049099)
chr6 (1-64)||(11313431-11313494)
chr6 (65-127)||(11417521-11417583)
chr6 (2-46)||(5269323-5269367)
chr6 (63-154)||(8064968-8065060)
chr6 (1-57)||(16876879-16876935)
chr6 (64-154)||(16970298-16970389)
chr6 (65-155)||(19134619-19134710)
chr6 (1-64)||(24558575-24558638)
chr6 (1-64)||(24558780-24558843)
chr6 (65-154)||(22414282-22414372)
chr6 (65-127)||(30753041-30753103)
chr6 (81-126)||(6267491-6267536)
chr6 (4-64)||(6623477-6623537)
chr6 (66-150)||(891857-891943)
chr6 (81-155)||(4577579-4577654)
chr6 (65-120)||(13531823-13531878)
chr6 (1-43)||(26339891-26339933)
chr6 (80-117)||(24641285-24641322)
chr6 (3-43)||(19054506-19054546)
chr6 (1-65)||(25998808-25998872)
chr6 (1-65)||(26098333-26098397)
chr6 (1-65)||(28149784-28149848)
[»] chr3 (64 HSPs)
chr3 (71-152)||(4280780-4280861)
chr3 (1-65)||(22339732-22339796)
chr3 (81-154)||(45914727-45914801)
chr3 (4-64)||(54591517-54591577)
chr3 (1-64)||(4191171-4191234)
chr3 (1-64)||(9264342-9264405)
chr3 (1-64)||(33798848-33798911)
chr3 (1-64)||(50692315-50692378)
chr3 (1-64)||(54495523-54495586)
chr3 (65-127)||(42362758-42362820)
chr3 (65-154)||(55467148-55467238)
chr3 (1-65)||(22407697-22407761)
chr3 (65-121)||(26758706-26758762)
chr3 (1-65)||(39078820-39078884)
chr3 (71-154)||(51661883-51661967)
chr3 (1-64)||(5440569-5440632)
chr3 (65-155)||(8355810-8355901)
chr3 (72-154)||(22255809-22255892)
chr3 (1-64)||(50692518-50692581)
chr3 (65-155)||(52632608-52632699)
chr3 (65-127)||(2565840-2565902)
chr3 (65-154)||(8557288-8557378)
chr3 (65-127)||(25918792-25918854)
chr3 (65-154)||(46252956-46253046)
chr3 (1-62)||(49477528-49477589)
chr3 (1-46)||(50203906-50203951)
chr3 (74-142)||(45629668-45629736)
chr3 (1-64)||(4029693-4029756)
chr3 (1-64)||(9264135-9264198)
chr3 (1-64)||(9264549-9264612)
chr3 (3-46)||(21832250-21832293)
chr3 (1-64)||(21832740-21832803)
chr3 (5-56)||(26366731-26366782)
chr3 (1-64)||(37058820-37058883)
chr3 (1-64)||(39956516-39956579)
chr3 (1-60)||(39956723-39956782)
chr3 (1-64)||(42258902-42258965)
chr3 (1-64)||(44461280-44461343)
chr3 (65-128)||(48169149-48169212)
chr3 (1-58)||(34992575-34992632)
chr3 (1-58)||(34992867-34992924)
chr3 (16-65)||(48308521-48308570)
chr3 (1-66)||(51338490-51338555)
chr3 (1-37)||(5440631-5440667)
chr3 (16-64)||(35358729-35358777)
chr3 (65-152)||(38651553-38651641)
chr3 (1-64)||(51642684-51642748)
chr3 (1-65)||(53640221-53640285)
chr3 (5-64)||(10758821-10758880)
chr3 (64-154)||(17144254-17144345)
chr3 (1-64)||(22407490-22407553)
chr3 (1-48)||(29763745-29763792)
chr3 (1-64)||(37223567-37223630)
chr3 (1-64)||(40926695-40926758)
chr3 (65-120)||(44651434-44651489)
chr3 (1-64)||(53640014-53640077)
chr3 (74-155)||(34185407-34185489)
chr3 (1-43)||(54369052-54369094)
chr3 (19-64)||(35358520-35358565)
chr3 (74-153)||(5640237-5640317)
chr3 (65-152)||(10481127-10481215)
chr3 (1-57)||(21833523-21833579)
chr3 (1-57)||(39269499-39269555)
chr3 (1-57)||(40927029-40927085)
[»] chr5 (61 HSPs)
chr5 (3-64)||(11632423-11632484)
chr5 (65-154)||(36568188-36568278)
chr5 (65-154)||(41455355-41455445)
chr5 (65-152)||(28224377-28224465)
chr5 (1-64)||(48153-48216)
chr5 (1-64)||(28358084-28358147)
chr5 (1-64)||(34457295-34457358)
chr5 (2-65)||(43490513-43490576)
chr5 (14-66)||(15286843-15286895)
chr5 (65-152)||(23418440-23418528)
chr5 (1-64)||(2908611-2908674)
chr5 (1-64)||(37656781-37656844)
chr5 (1-64)||(38376723-38376786)
chr5 (1-64)||(43490305-43490368)
chr5 (65-154)||(42920086-42920176)
chr5 (65-153)||(691122-691211)
chr5 (1-58)||(34457094-34457151)
chr5 (67-154)||(33901511-33901599)
chr5 (1-64)||(2908818-2908881)
chr5 (1-64)||(3762898-3762961)
chr5 (5-64)||(5127966-5128025)
chr5 (1-56)||(30592428-30592483)
chr5 (64-154)||(33793107-33793198)
chr5 (1-56)||(35527037-35527092)
chr5 (1-64)||(37781893-37781956)
chr5 (65-127)||(2423285-2423347)
chr5 (65-154)||(5175152-5175241)
chr5 (1-43)||(15510553-15510595)
chr5 (65-127)||(23623484-23623546)
chr5 (65-127)||(25495574-25495635)
chr5 (65-127)||(34087835-34087897)
chr5 (81-154)||(42920555-42920629)
chr5 (66-127)||(6633787-6633848)
chr5 (87-155)||(15216553-15216622)
chr5 (66-154)||(18432572-18432661)
chr5 (1-57)||(30870934-30870990)
chr5 (65-120)||(6595409-6595464)
chr5 (1-64)||(13413576-13413639)
chr5 (1-64)||(18107825-18107888)
chr5 (5-64)||(18914214-18914273)
chr5 (5-64)||(18914421-18914480)
chr5 (2-57)||(22732787-22732842)
chr5 (1-64)||(24125054-24125117)
chr5 (1-64)||(36307972-36308034)
chr5 (5-64)||(39268010-39268069)
chr5 (65-127)||(2796370-2796432)
chr5 (65-127)||(2802531-2802593)
chr5 (5-43)||(15510708-15510746)
chr5 (1-43)||(22196602-22196644)
chr5 (65-147)||(22553839-22553920)
chr5 (82-128)||(22747135-22747181)
chr5 (1-43)||(38131777-38131819)
chr5 (1-43)||(39668466-39668508)
chr5 (74-127)||(19402724-19402777)
chr5 (82-127)||(26690285-26690330)
chr5 (82-127)||(26960017-26960062)
chr5 (5-62)||(32501205-32501262)
chr5 (75-127)||(2589481-2589533)
chr5 (74-126)||(6719054-6719106)
chr5 (1-57)||(40169090-40169146)
chr5 (63-146)||(40331004-40331088)
[»] chr2 (44 HSPs)
chr2 (1-64)||(34775349-34775412)
chr2 (1-65)||(6986465-6986529)
chr2 (65-154)||(12884855-12884946)
chr2 (1-64)||(12432097-12432160)
chr2 (1-64)||(19859917-19859980)
chr2 (1-64)||(19860029-19860092)
chr2 (1-64)||(20999038-20999101)
chr2 (1-64)||(27545165-27545228)
chr2 (65-154)||(5862176-5862266)
chr2 (65-154)||(12041112-12041202)
chr2 (2-64)||(29695389-29695451)
chr2 (65-127)||(41166636-41166698)
chr2 (63-152)||(29172157-29172246)
chr2 (1-64)||(883650-883713)
chr2 (1-64)||(3435535-3435598)
chr2 (1-64)||(12419830-12419893)
chr2 (1-64)||(12431890-12431953)
chr2 (1-64)||(16006969-16007032)
chr2 (1-64)||(25621334-25621397)
chr2 (2-64)||(17727396-17727458)
chr2 (65-149)||(11695939-11696024)
chr2 (65-116)||(11678461-11678512)
chr2 (1-64)||(18607302-18607365)
chr2 (1-64)||(21734408-21734471)
chr2 (1-64)||(33986024-33986087)
chr2 (81-154)||(27301013-27301087)
chr2 (74-155)||(36500136-36500218)
chr2 (4-57)||(883849-883902)
chr2 (3-44)||(13839310-13839351)
chr2 (3-48)||(43688472-43688517)
chr2 (65-152)||(11377175-11377263)
chr2 (1-64)||(884049-884112)
chr2 (1-64)||(7257657-7257720)
chr2 (67-118)||(28790926-28790977)
chr2 (5-64)||(29101742-29101801)
chr2 (1-64)||(29684003-29684066)
chr2 (81-127)||(15320139-15320185)
chr2 (1-43)||(18901913-18901955)
chr2 (1-35)||(32975272-32975306)
chr2 (14-64)||(33985831-33985881)
chr2 (1-46)||(936822-936867)
chr2 (65-126)||(13194384-13194445)
chr2 (4-64)||(10570927-10570987)
chr2 (65-117)||(44085971-44086023)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-63)||(2996-3058)
[»] scaffold0204 (2 HSPs)
scaffold0204 (65-154)||(26342-26432)
scaffold0204 (65-154)||(15001-15090)
[»] scaffold0434 (2 HSPs)
scaffold0434 (1-64)||(13505-13568)
scaffold0434 (1-43)||(13319-13361)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-60)||(21312-21371)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-60)||(76848-76907)
[»] scaffold0210 (2 HSPs)
scaffold0210 (74-152)||(18913-18991)
scaffold0210 (74-152)||(26805-26883)
[»] scaffold0688 (1 HSPs)
scaffold0688 (65-112)||(1660-1707)
[»] scaffold1138 (1 HSPs)
scaffold1138 (7-59)||(1928-1980)


Alignment Details
Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 26344659 - 26344569
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||||    
T  26344659 gtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccatgcggttgagtaaaaaattgatccgaatacatccgaaccaaatgc 26344569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 27507113 - 27507023
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||| | ||||||||||||||||||||    
T  27507113 gtttggttcagttggtaaaatcaaaaccgcaaaccgaaccaaagcatgcggttgagtaaaaaaatgatccgaatacatccgaaccaaatgc 27507023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 6248550 - 6248612
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  6248550 gtttggttcggttggtaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgggtaaaaaa 6248612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 25559614 - 25559532
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgca 155  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||  ||||||||| | |||| ||||||||||||||||    
T  25559614 ggttggtaaaatcaaaaccacaaaccgaaccaaaccatacggttgagtaaaaaaatgatccgaatatatccgaaccaaatgca 25559532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 36781796 - 36781726
Alignment:
Q  82 aaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||   ||||||||| ||||||||    
T  36781796 aaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaattgatctgaatacatccaaaccaaat 36781726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 29273277 - 29273338
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    ||||||||| |||||||||||||||||||||||||||||| || |||| ||||| |||||||    
T  29273277 ctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatag 29273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 23474722 - 23474634
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatg 153  Q
    ||||| || |||||| ||||| ||||||||||| |||||||||||||| ||||| || |||||||||   ||||||||||||| |||||    
T  23474722 gtttggtttggttggtaaaataaaaaccgcaaatcgaaccaaaccatgaggttgggtaaaaaatgatctgaatacatccgaactaaatg 23474634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 12974051 - 12974114
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaat 128  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||  ||||||| ||||||    
T  12974051 gtttggttcggttggtaaaatcaaaacagcaaaccgaaccaaaccatgttgttgagtaaaaaat 12974114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39649133 - 39649196
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  39649133 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43361601 - 43361656
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttt 56  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||    
T  43361601 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 43361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43361806 - 43361861
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttt 56  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||    
T  43361806 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 43361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 50471586 - 50471656
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||  |||||||||    
T  50471586 aaaatcaaaaccgcaaaccgaaccaaaccatgcagttgagt-agaaatgatccgaatacatttgaaccaaat 50471656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9381358 - 9381316
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  9381358 cctctttatatattcttctcaagagtcttgtctatccgatgtg 9381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11590475 - 11590433
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  11590475 cctctttataaactcttctcaagagtcttgtctatccgatgtg 11590433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 12314620 - 12314570
Alignment:
Q  14 tcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  12314620 tcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 12314570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 16063288 - 16063350
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| || |||||| |||||||||||||||||| |||||||| ||||||||||||| |||||    
T  16063288 gtttggttgggttggtaaaatcaaaaccgcaaactgaaccaaatcatgcggttgagtaaaaaa 16063350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 50951617 - 50951528
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatgca 155  Q
    |||||||| |||| | ||||| |||||||| |||||||||||||||||||||||| | |||||| |||| ||| ||| | |||||||||||    
T  50951617 gtttgatttggttagtaaaataaaaaccgccaaccgaaccaaaccatgcggttgaat-aaaaataattcgaatgcattcaaaccaaatgca 50951528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13959457 - 13959412
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  13959457 cctctttataaactcttctcaagagtcttatctatccgatgtgaga 13959412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 35375645 - 35375734
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatg 153  Q
    ||||| || |||||| ||||| ||||||||||||| ||| |||||||||||||||||  |||||||||   ||||||| |||||||||||    
T  35375645 gtttggttaggttggtaaaataaaaaccgcaaaccaaacaaaaccatgcggttgagtaaaaaaatgatctgaatacattcgaaccaaatg 35375734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52846898 - 52846963
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagt 66  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||||    
T  52846898 cctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaatagt 52846963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 3937230 - 3937322
Alignment:
Q  64 agtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgca 155  Q
    |||||| || |||||  |||||||||||||||||||||||||||||||| ||||| ||  |||||| || | ||||||||| ||||| |||||    
T  3937230 agtttggtttggttgctaaaatcaaaaccgcaaaccgaaccaaaccatgtggttgggtaaaaaaattatccaaatacatccaaaccagatgca 3937322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 36203043 - 36202959
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa-atgattctaatacatccgaaccaaatgc 154  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||||||||||||| ||||  |||  | ||||||||| ||||||||||    
T  36203043 ttcggttggtaaaatgaaagccgcaaaccaaaccaaaccatgcggttgagtaaaaatgtgaaccgaatacatccaaaccaaatgc 36202959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 9380940 - 9380889
Alignment:
Q  16 ttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagtt 67  Q
    |||||||||||||||||||||||||||| || |||| ||||| |||||||||    
T  9380940 ttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatagtt 9380889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15392080 - 15392017
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  15392080 cctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 15392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21538983 - 21539046
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||||||||||||||||||||| | |||||||| || ||  ||||||||| ||||||    
T  21538983 cctctttataaattcttctcaagagtcttatttatccgatatgggacatggatttttcccaata 21539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 11072964 - 11072882
Alignment:
Q  73 cggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||||| ||||| |||||| |||||| | ||||||||||||||||||  | |||||||| | | ||||||||||||||||||    
T  11072964 cggttggtaaaatgaaaacctcaaaccaagccaaaccatgcggttgagcaagaaaatgatccgattacatccgaaccaaatgc 11072882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 26063814 - 26063752
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||| |||||||||||  ||||||||||||||||||| |||| ||| |||||    
T  26063814 gtttggttcggttggtaaaatcaaaactccaaaccgaaccaaaccatgtggtttagtaaaaaa 26063752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48558370 - 48558436
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagtt 67  Q
    |||||||||| | |||||||||||||||| |||||||||| || || |||| ||||| |||||||||    
T  48558370 cctctttatatactcttctcaagagtcttatctatccgatatgggacttgggtttttcccaatagtt 48558436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 52380333 - 52380251
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaac 147  Q
    ||||| ||||||||| |||||||||| |||||||||| |||||||||    |||||| |||||||||   |||||||||||||    
T  52380333 gtttggttcggttggtaaaatcaaaatcgcaaaccgatccaaaccatataattgagtaaaaaatgatctgaatacatccgaac 52380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 24630440 - 24630485
Alignment:
Q  82 aaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||    
T  24630440 aaataaaaaccgcaaactgaaccaaaccatgcggttgagtaaaaaa 24630485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 16537430 - 16537350
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaa-aatgattctaatacatccgaaccaaatg 153  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||||||||  ||| |||||| | ||||||||| ||| |||||    
T  16537430 ggttggtaaaataaaaaccgcaaaccaaaccaaatcatgcggttgaggaaaataatgatccgaatacatcctaactaaatg 16537350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25799175 - 25799107
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagtttg 69  Q
    |||||||||||| ||||||||||||| || |||||| |||||| ||  ||| ||||| |||||||||||    
T  25799175 cctctttataaactcttctcaagagttttatctatctgatgtgggacatgggtttttcccaatagtttg 25799107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 32909965 - 32909881
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttg-agtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||| |||| ||||| |||||| |||||| |||||||||||||||||| |   |||||||||  || ||||||||||||||||||    
T  32909965 ttcgattggtaaaatgaaaaccacaaaccaaaccaaaccatgcggttgaacaaaaaaatgatcttattacatccgaaccaaatgc 32909881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 44056215 - 44056271
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt 121  Q
    ||||| ||| ||||| ||||| ||||||||||||  |||||||||||||||||||||    
T  44056215 gtttggttcagttggtaaaatgaaaaccgcaaacataaccaaaccatgcggttgagt 44056271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 2997312 - 2997359
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgagatttg 50  Q
    |||||||| | |||||||||||||||| ||||||||||||| ||||||    
T  2997312 tctttatatactcttctcaagagtcttatctatccgatgtgggatttg 2997359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 9381141 - 9381106
Alignment:
Q  14 tcttctcaagagtcttgtctatccgatgtgagattt 49  Q
    |||||||||||||||||||||||||||||| |||||    
T  9381141 tcttctcaagagtcttgtctatccgatgtgggattt 9381106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11581810 - 11581747
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| ||| |  ||||||||||| ||||||||||||| ||||||  ||||||||||||    
T  11581810 cctctttatatattttcatcaagagtcttatctatccgatgtgggatttgagttttttccaata 11581747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20429023 - 20429086
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| | || ||||||||||| | ||||||||||| || |||||| ||||||||||    
T  20429023 cctctttataaactattatcaagagtcttatgtatccgatgtgggacttggatgttttccaata 20429086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 25507348 - 25507415
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgatt 132  Q
    ||||| || |||||| ||||| ||||||||||||| |||||||   ||||||||||| ||||||||||    
T  25507348 gtttggtttggttggtaaaataaaaaccgcaaaccaaaccaaattgtgcggttgagtaaaaaatgatt 25507415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39648927 - 39648989
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||| ||||||| || |||| ||||| ||||||    
T  39648927 cctctttataaactcttctcaagagtcttatctat-cgatgtgggacttgggtttttcccaata 39648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 40094773 - 40094730
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggtt 117  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||    
T  40094773 ggttggtaaaatgaaaaccgcaaaccgaaccaaatcatgcggtt 40094730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 45949136 - 45949073
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaat 128  Q
    ||||| ||||||||| ||||| ||||||||||| | ||||| ||||||| ||||||| ||||||    
T  45949136 gtttggttcggttggtaaaataaaaaccgcaaatcaaaccataccatgcagttgagtcaaaaat 45949073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2697380 - 2697422
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  2697380 cctctttataaactcttctcaagagtcctatctatccgatgtg 2697422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4022174 - 4022216
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  4022174 cctctttataaactcttctcaagagtcctatctatccgatgtg 4022216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 9961834 - 9961760
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||| ||||| | ||||||| ||||||||||||| ||||| |||| | ||||||||| ||||||||||    
T  9961834 aaaatgaaaacagcaaatcaaaccaaatcatgcggttgagtaaaaaagtgatccgaatacatccaaaccaaatgc 9961760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15391874 - 15391832
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||| | |||||||||||||||| |||||||||||||    
T  15391874 cctctttatatactcttctcaagagtcttatctatccgatgtg 15391832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 17652209 - 17652299
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| |||||| |||| | ||| ||||||||||||||||  ||||| |||| | ||||||||| || |||||||    
T  17652209 gtttggttcggttggtaaaatgaaaaccccaaatcaaacaaaaccatgcggttgaggaaaaaagtgatccgaatacatccaaatcaaatgc 17652299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 24382209 - 24382263
Alignment:
Q  10 aaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||||||||| ||||||||||||| || ||||  |||| ||||||    
T  24382209 aaattcttctcaagagtcttatctatccgatgtgggacttgggattttcccaata 24382263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40521542 - 40521584
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||| |||| |||||||||||||    
T  40521542 cctctttataaactcttctcaagaatcttatctatccgatgtg 40521584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43423334 - 43423292
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||||| || |||||||||||||    
T  43423334 cctctttataaactcttctcaagagtgttatctatccgatgtg 43423292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 10847097 - 10847044
Alignment:
Q  101 aaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||||| ||||||||||||| |||| | |||| ||||||||| ||||||||||    
T  10847097 aaccaaatcatgcggttgagtaaaaagttattcgaatacatccaaaccaaatgc 10847044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15391803 - 15391746
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttttt 58  Q
    |||||||||| | | |||||||||||||| ||||||||||||| || |||| ||||||    
T  15391803 cctctttatatacttttctcaagagtcttatctatccgatgtgggacttggttttttt 15391746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38871204 - 38871269
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagt 66  Q
    |||||||||||| | || ||||||||||| |||||| |||||| || |||| ||||| ||||||||    
T  38871204 cctctttataaacttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaatagt 38871269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 47086332 - 47086389
Alignment:
Q  7 tataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||| |||| ||||||||||| |||||| |||||| ||  ||||||||||||||||    
T  47086332 tataaactcttatcaagagtcttatctatctgatgtgggacatggattttttccaata 47086389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 382553 - 382585
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgc 113  Q
    ||||| |||||||||||||||||||||||||||    
T  382553 aaaataaaaaccgcaaaccgaaccaaaccatgc 382585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 6693693 - 6693621
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaat 152  Q
    ||||| |||||| |||||| |||||||||||||| |||||| ||||| ||||   ||||||||||||| ||||    
T  6693693 aaaattaaaaccacaaacctaaccaaaccatgcgattgagtaaaaaattgatctgaatacatccgaacaaaat 6693621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 29265970 - 29265910
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||| | |||||||||||||||| || |||||||||| || |||| ||||| ||||||    
T  29265970 ctttatatactcttctcaagagtcttatccatccgatgtgggacttgggtttttcccaata 29265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 33770214 - 33770302
Alignment:
Q  66 tttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa-atgattctaatacatccgaaccaaatg 153  Q
    |||| ||||||||  ||||| |||| ||||||| ||||| || ||||| ||||| | |||| ||||||| |||||||||||| ||||||    
T  33770214 tttggttcggttgctaaaataaaaatcgcaaacagaaccgaatcatgcagttgaataaaaatatgattcgaatacatccgaatcaaatg 33770302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 8485166 - 8485251
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaa-aaatgattctaatacatccgaaccaaatgca 155  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||| |||||||||||| ||||||||    
T  8485166 ttcggttggtaaaatcaaaaccgcaaaccggaccaaaccatgcggttgagtaaataaatgattcgaatacatccgaatcaaatgca 8485251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 48653505 - 48653415
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| |||| ||| ||||||||||| | |||||||||||||||||||| |||||||  ||||||||||| ||||||||||||||||||||    
T  48653505 gtttggttcgattgacaaaatcaaaatcacaaaccgaaccaaaccatgcagttgagtaaaaaaatgattcaaatacatccgaaccaaatgc 48653415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 23449586 - 23449495
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgca 155  Q
    ||||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||||||| | ||||||||| || ||||||||    
T  23449586 gtttggttcggttggtaaaatcaaaactgcaaactgaaccaaaccatgcggttgagtaaaaaaatgatccgaatacatccaaatcaaatgca 23449495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 41325877 - 41325968
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaa-aaatgattctaatacatccgaaccaaatgca 155  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || || |||| | |||||||||||| ||||||||    
T  41325877 gtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccatgcagttgagtaaataattgatccaaatacatccgaatcaaatgca 41325968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49380929 - 49380992
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  49380929 cctctttataaactcttctcaagagtcttatctatccgatgtgagacttggatttttcccaata 49380992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 1564658 - 1564568
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaa-aatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| | | ||| ||| || | ||||||||||||||||||||    
T  1564658 gtttggttcagttggtaaaatcaaaaccgcaaaccgaaccaaaccatgcggttaactaaaagaattatcccaatacatccgaaccaaatgc 1564568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 45983813 - 45983902
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatg 153  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||  | ||||| |||| | |||||||||||||||||    
T  45983813 gtttgattcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgagcaagaaaataattcgattacatccgaaccaaatg 45983902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 4642934 - 4643024
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt--gaaaaatgattctaatacatccgaaccaaatg 153  Q
    ||||| |||| |||| |||||||||||  ||||| ||||||||||||||||||||||   ||||||||||  |||||||||||||||||||    
T  4642934 gtttggttcgattggtaaaatcaaaactacaaactgaaccaaaccatgcggttgagtaaaaaaaatgatttgaatacatccgaaccaaatg 4643024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12016732 - 12016795
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  12016732 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12016795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12016940 - 12017003
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  12016940 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 29233226 - 29233313
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgag-tgaaaaatgattctaatacatccgaaccaaa 151  Q
    ||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||  ||||| |||| | ||||||||| |||||||    
T  29233226 gtttggttcggttggtaaaattaaaaccacaaaccgaaccaaaccatgcggttgagaagaaaattgatccgaatacatccaaaccaaa 29233313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 3999236 - 3999326
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    |||| |||| ||||| ||||| |||||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||  ||||||||||    
T  3999236 gtttaattcagttggtaaaataaaaaccgcaaaccgaaccaaaccatgtggttgagtaagaaagtgattcaaatacatcttaaccaaatgc 3999326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 20986881 - 20986971
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||| | |||||||||| | |||||| |||||||| |||||||||||| ||||| |||| | ||||||||||||||||||||    
T  20986881 gtttggttcggttagtaaaatcaaaatcccaaaccaaaccaaacaatgcggttgagtaaaaaattgatccgaatacatccgaaccaaatgc 20986971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 21069540 - 21069629
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||| | ||||||||| ||| ||||||    
T  21069540 gtttggttcggttggtaaaatcaaaac-gcaaaccgaacaaaaccatgcggttgagtaaaaaattgatccgaatacatccaaactaaatgc 21069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 27743816 - 27743902
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaa 150  Q
    ||||| ||| ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||| |||||  |||| |||||||||||    
T  27743816 gtttggttcagttggtaaaattaaaaccgcaaaccaaaccaacccatgcggttgagtgaaaaattgatttgaataaatccgaaccaa 27743902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 48338820 - 48338910
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||  ||||| |||| | ||||||||| ||| ||||||    
T  48338820 gtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaactaaatgc 48338910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 15986173 - 15986092
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||| | ||||| |||| | |||||||||||| |||||||    
T  15986173 ggtttgcaaaatcgaaaccgcaaactgaaccaaaccatgcggttgaataaaaaattgatccgaatacatccgaatcaaatgc 15986092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 46471913 - 46471986
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatg 153  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||| |||| | |||||||||||||||||||    
T  46471913 aaaatgaaaaccgcaaaccaaaccaaatcatgcggttgagtaaaaaagtgatccgaatacatccgaaccaaatg 46471986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 54273535 - 54273444
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt--gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||  ||||| ||||||||||||| |||| || |||||||||||||   ||||||||| | ||||||||||||||||||||    
T  54273535 gtttggttcggttgctaaaataaaaaccgcaaaccaaaccgaatcatgcggttgagtaaaaaaaatgatccgaatacatccgaaccaaatgc 54273444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25753654 - 25753717
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||| ||||||||||||||||||||||||| || |||| ||||| ||||||    
T  25753654 cctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 25753717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43943728 - 43943665
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  43943728 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43943665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54210432 - 54210369
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  54210432 cctctttatatactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 54210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 15724315 - 15724405
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| ||||  ||||||| ||||||||||||||||||||  | |||||||| | | ||||||||||||||||||    
T  15724315 gtttggttcggttggtaaaataaaaattgcaaaccaaaccaaaccatgcggttgagcaagaaaatgatacgattacatccgaaccaaatgc 15724405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 21498585 - 21498523
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||| | |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  21498585 ctctttatatactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 21498523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 28148246 - 28148336
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||| | ||||||||||||||||||||||| ||| |||||||||| ||  |||||||||   ||||||||||||| ||||||    
T  28148246 gtttggttcggttagtaaaatcaaaaccgcaaaccgaacaaaatcatgcggttgcgtaaaaaaatgatctgaatacatccgaactaaatgc 28148336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4645907 - 4645858
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttg 50  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  4645907 cctctttatatactcttctcaagagtcttatctatccgatgtgagatttg 4645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5488422 - 5488358
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| |||||||||||||||| | ||||||||||| || |||| ||||| |||||||    
T  5488422 cctctttataaactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaatag 5488358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5065908 - 5065845
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| ||| || ||||||||||| |||||||||||||||| |||  ||||||||||||    
T  5065908 cctctttatatatttttttcaagagtcttatctatccgatgtgagacttgagttttttccaata 5065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23018525 - 23018478
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatt 48  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||    
T  23018525 cctctttataaactcttctcaagagtcatatctatccgatgtgagatt 23018478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28497263 - 28497326
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  28497263 cctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 28497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 48293015 - 48292941
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||||||| |||||||||||| |||||||  ||||| |||| | ||||||||| ||||||||||    
T  48293015 aaaatgaaaaccgcaaaccaaaccaaaccatgtggttgaggaaaaaagtgatccgaatacatccaaaccaaatgc 48292941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 23119901 - 23119852
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgag 120  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  23119901 ttcggttggtaaaatgaaaatcgcaaaccgaaccaaatcatgcggttgag 23119852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23350854 - 23350789
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagt 66  Q
    |||||||||| | |||| ||||||||||| | ||||||||||| ||||||| ||||| ||||||||    
T  23350854 cctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaatagt 23350789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 41260591 - 41260652
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa 126  Q
    ||||||||||||||| ||||| |||||| ||||  ||||| |||||||||||||||| ||||    
T  41260591 gtttgattcggttggtaaaataaaaaccacaaattgaaccgaaccatgcggttgagtaaaaa 41260652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1923040 - 1923103
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||| |||||| ||  ||| ||||| ||||||    
T  1923040 cctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaata 1923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 23625516 - 23625425
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgca 155  Q
    ||||| || |||||| ||||||||||||||||||| |||||||| || ||||||| |  ||||||||| | | |||||| ||||| ||||||    
T  23625516 gtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaactatacggttgaataaaaaaatgatccgagtacatctgaaccgaatgca 23625425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27634375 - 27634438
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || || | ||||| ||||||    
T  27634375 cctctttatatactcttctcaagagtcttatctatccgatgtgggactttggtttttcccaata 27634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29113504 - 29113441
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||| |||||| ||  ||| ||||| ||||||    
T  29113504 cctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaata 29113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39110772 - 39110709
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| | | ||||||||||| |||| |||||||||||||||| |||  ||||||||||||    
T  39110772 cctctttacatactcttctcaagattcttatctatccgatgtgagacttgagttttttccaata 39110709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39110962 - 39110899
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||  ||||| ||||||    
T  39110962 cctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 45464642 - 45464733
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgca 155  Q
    ||||| ||||||||  ||||||||||||| |||  ||||||||||||| | |||||| ||||| |||| | |||| ||| ||||||||||||    
T  45464642 gtttggttcggttgataaaatcaaaaccgtaaattgaaccaaaccatgtgattgagtaaaaaagtgatccaaatatatctgaaccaaatgca 45464733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 990602 - 990560
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||||| || |||||||||||||    
T  990602 cctctttataaactcttctcaagagtgttatctatccgatgtg 990560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 25686071 - 25686025
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||||    
T  25686071 aaaataaaaaccgcaaaccaaaccaaaccatgtggttgagtaaaaaa 25686025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 48685225 - 48685271
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccat 111  Q
    ||||||||||||||| ||||| ||||||||||| | |||||||||||    
T  48685225 gtttgattcggttggtaaaataaaaaccgcaaatcaaaccaaaccat 48685271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49544387 - 49544345
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||| |||| |||||||||||||    
T  49544387 cctctttataaactcttctcaagaatcttatctatccgatgtg 49544345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 51469536 - 51469494
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  51469536 cctctttataaactcttctcaagagtcctatctatccgatgtg 51469494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 8560026 - 8560083
Alignment:
Q  7 tataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||| |||| ||||||||||| ||||||||||||| || ||||| |||| ||||||    
T  8560026 tataaactcttatcaagagtcttatctatccgatgtgggacttggacttttcccaata 8560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49380715 - 49380674
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgt 42  Q
    |||||||||||| |||||||||||||||| ||||||| ||||    
T  49380715 cctctttataaactcttctcaagagtcttatctatccaatgt 49380674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 50307328 - 50307275
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    ||||||||| |||| ||||||||||| ||||||||||||| || |||| |||||    
T  50307328 ctttataaactcttgtcaagagtcttatctatccgatgtgggacttgggttttt 50307275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52810674 - 52810715
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgt 42  Q
    |||||||||||| ||||||||||| |||| ||||||||||||    
T  52810674 cctctttataaactcttctcaagaatcttatctatccgatgt 52810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 32222900 - 32222860
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt 121  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  32222900 aaaatgaaaaccgcaaaccaaaccaaaccatacggttgagt 32222860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 35014776 - 35014816
Alignment:
Q  87 aaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||||||||| ||| ||||||||||||||||||| |||||    
T  35014776 aaaaccgcaaatcgacccaaaccatgcggttgagtaaaaaa 35014816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 36106065 - 36106009
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||||||| |||||  |||||||||| | || |||||||||||||||||| |||||    
T  36106065 ttcggttggtaaaatggaaaccgcaaagcaaagcaaaccatgcggttgagtaaaaaa 36106009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52827281 - 52827337
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||||| |||| ||||||||| | ||||||| |||||||| |||| |||||    
T  52827281 cctctttataaactcttatcaagagtcctatctatccaatgtgagacttgggttttt 52827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 53559357 - 53559417
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||| | ||||||||||||| || ||||||||||||| || |||| ||||| ||||||    
T  53559357 ctttatatactcttctcaagagttttatctatccgatgtgggacttggttttttcccaata 53559417  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 11219447 - 11219537
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||  ||||||||| | ||||||||||||||||||||    
T  11219447 gtttggttcggttggtaaaatcaaaaccgcaaaccgaaccaaaccatgtgattgagtaaaaaaatgatccgaatacatccgaaccaaatgc 11219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 4785701 - 4785792
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgca 155  Q
    |||||||| |||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| |||| | |||||||| ||||||||||||    
T  4785701 gtttgatttggtttgtaaaatcaaaactgcaaaccgaaccaaaccatgcggttgagtaaaaaattgatccaaatacatctgaaccaaatgca 4785792  T

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Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10989290 - 10989353
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  10989290 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaata 10989353  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15011078 - 15011141
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  15011078 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaata 15011141  T

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Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 12659871 - 12659781
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| |||||  ||||||||||| |||||||||||||||||||||| | |||| ||| | ||||||||||||||||||||    
T  12659871 gtttggttcggttggtaaaatagaaaccgcaaactgaaccaaaccatgcggttgagtaagaaaacgatccgaatacatccgaaccaaatgc 12659781  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5720916 - 5720980
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||||||||| |||||||    
T  5720916 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaatag 5720980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15010870 - 15010929
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttcc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||    
T  15010870 cctctttataaattcttctcaagagtcttgtctatccgatgtgggacttggggtttttcc 15010929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 13325790 - 13325836
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13325790 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaaa 13325836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42228826 - 42228764
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaat 63  Q
    |||||||||||| |||||||||||||||||||||||||||||| || || ||||||| |||||    
T  42228826 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttagatttttcccaat 42228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 20760711 - 20760772
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  20760711 tctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 20760772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 24681682 - 24681598
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||| |||||||| |||||||||||||||||||||| ||||||||  ||||| |||| | ||||||||| ||||||||||    
T  24681682 ttcggctggtaaaatcaagaccgcaaaccgaaccaaaccatacggttgagcaaaaaattgatccgaatacatccaaaccaaatgc 24681598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40902442 - 40902506
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| ||||||||||||||||||||||||||||||  | |||| ||||| |||||||    
T  40902442 cctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaatag 40902506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10989083 - 10989146
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| ||||||||||||||||||||| | |||||| || |||| ||||||||||||    
T  10989083 cctctttataaactcttctcaagagtcttgtctacctgatgtgggacttgggttttttccaata 10989146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 12193064 - 12192981
Alignment:
Q  72 tcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||||| |||||||||||||||||||||||||||||||  | || |||  ||||| ||||| ||||||||||||||| ||||    
T  12193064 tcggttggtaaaatcaaaaccgcaaaccgaaccaaaccattagttttagtaaaaaaacgattcgaatacatccgaaccatatgc 12192981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 12437492 - 12437409
Alignment:
Q  72 tcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||||| |||||||||||||||||||||||||||||||  | || |||  ||||| ||||| ||||||||||||||| ||||    
T  12437492 tcggttggtaaaatcaaaaccgcaaaccgaaccaaaccattagttttagtaaaaaaacgattcgaatacatccgaaccatatgc 12437409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16454684 - 16454747
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||| ||||||||| |||||||||||||||| |||| ||||||||||||    
T  16454684 cctctttatatactcttcttaagagtcttatctatccgatgtgagacttggtttttttccaata 16454747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 22810789 - 22810699
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt--gaaaaatgattctaatacatccgaaccaaatg 153  Q
    ||||| ||||||| | ||||||||||  ||||||| ||||||||||||||||| |||   ||||||||||| ||||||||| |||||||||    
T  22810789 gtttggttcggtttgtaaaatcaaaattgcaaacctaaccaaaccatgcggtttagtaaaaaaaatgattcaaatacatccaaaccaaatg 22810699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 26774936 - 26774846
Alignment:
Q  66 tttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgca 155  Q
    |||| ||||||||| ||||| ||||| |||||| |||||||||||||||||||||| | |||| |||   ||||||||||| |||||||||    
T  26774936 tttggttcggttggtaaaataaaaactgcaaactgaaccaaaccatgcggttgagtaagaaaacgatatgaatacatccgatccaaatgca 26774846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 31477814 - 31477724
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| ||||||||||||| |||||||||||| |||||||  | |||||||| | | |||| |||||||||||||    
T  31477814 gtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgagcaagaaaatgatccgattacacccgaaccaaatgc 31477724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43599366 - 43599302
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||  ||||| |||||||    
T  43599366 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaatag 43599302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8559636 - 8559573
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  8559636 cctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 8559573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4195999 - 4196041
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  4195999 cctcttgataaactcttctcaagagtcttgtctatccgatgtg 4196041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 27675025 - 27675082
Alignment:
Q  94 caaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    |||||| ||||||||||||||||||||| ||||||||| | | ||||||||||||||||    
T  27675025 caaaccaaaccaaaccatgcggttgagt-aaaaatgatccgattacatccgaaccaaat 27675082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35561721 - 35561660
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaa 62  Q
    |||||||||||| ||||||||||| |||| ||||||||||||| || |||| ||||| ||||    
T  35561721 cctctttataaactcttctcaagaatcttatctatccgatgtgggacttgggtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 28072724 - 28072649
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatga-ttct-aatacatccgaaccaaatgca 155  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| |||||| | |||| ||||| |||||||||||||||    
T  28072724 aaaataaaaaccgcaaaccaaaccaaaacatgcggttgagt-aaaaataagttctaaatacttccgaaccaaatgca 28072649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36039843 - 36039899
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||||| |||  ||||||||||  ||||||||||||||||||||| |||||    
T  36039843 cctctttataaactctcatcaagagtctcatctatccgatgtgagatttgggttttt 36039899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 11017430 - 11017505
Alignment:
Q  76 ttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaa 150  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||| |  | | ||||||||||||||||    
T  11017430 ttggtaaaatcaaaaccgcaaaccaaaccaaatcatgcggtttagtaaaaaaattgtccgaatacatccgaaccaa 11017505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 3895433 - 3895372
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||| ||||||||||| ||||||||||| |||||||||||| |||  ||| ||||||||||||    
T  3895433 ctctatataaattcttatcaagagtcttatctatccgatgt-agacatgggttttttccaata 3895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 8036066 - 8036156
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| ||||| | ||||| |||||||||||| |||||||| | |||||||| | | ||||||| ||| ||||||    
T  8036066 gtttggttcggttggtaaaatgaaaactgtaaaccaaaccaaaccatgtggttgagtaagaaaatgatccgattacatccaaactaaatgc 8036156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 8559740 - 8559790
Alignment:
Q  14 tcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  8559740 tcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 8559790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 45122365 - 45122303
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||| | |||||||||||||||| |||||| |||||| || |||| ||||| ||||||    
T  45122365 ctctttatatactcttctcaagagtcttatctatcagatgtgggacttgggtttttcccaata 45122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3183960 - 3184001
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgt 42  Q
    |||||||||||| |||||||||||||| | ||||||||||||    
T  3183960 cctctttataaactcttctcaagagtcctatctatccgatgt 3184001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 3538071 - 3538030
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtga 44  Q
    |||||||||| |||||||||||||| | ||||||||||||||    
T  3538071 tctttataaactcttctcaagagtcatatctatccgatgtga 3538030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 33435932 - 33435875
Alignment:
Q  7 tataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||| |||| ||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  33435932 tataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 33435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 9596269 - 9596313
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    ||||||||||| ||||||||||| |||| |||||||||| |||||    
T  9596269 ctctttataaactcttctcaagaatcttatctatccgatatgaga 9596313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18313820 - 18313776
Alignment:
Q  20 caagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| ||||||||||||| || |||||||||| ||||||    
T  18313820 caagagtcttatctatccgatgtgggacttggatttttcccaata 18313776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 22299012 - 22299090
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtg-aaaaatgattctaatacatc 142  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  22299012 gtttggttcggttggtaaaatcaaaaccgcaaaccgaaccaaatcatgctgttgagtgaaaaaatgattctaatacatc 22299090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 31287378 - 31287295
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaac 147  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||   |||||||||||||    
T  31287378 gtttggttcggttggtaaaattaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaaaatgatctgaatacatccgaac 31287295  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 1812965 - 1813046
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaa-aatgattctaatacatccgaaccaaatgc 154  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||| ||| |||||| | |||| |||||||||||||||    
T  1812965 ggttggtaaaatcaaaaccgcaaactgaaccaaactatgcggttgagtaaaataatgatccgaatatatccgaaccaaatgc 1813046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 34751476 - 34751561
Alignment:
Q  74 ggttggcaaaatcaaaaccgca-----aaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||| |||||||||||||||     |||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||    
T  34751476 ggttggtaaaatcaaaaccgcagaccgaaccgaaccaaaccatgcagttgagttaaaaatgatttgaatacatccgaaccaaatgc 34751561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 40849340 - 40849429
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatg 153  Q
    ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||| |||| | ||||||||| || ||||||    
T  40849340 gtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacatccaaatcaaatg 40849429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 524469 - 524381
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaat 152  Q
    ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||  ||||| |||| | ||||||||| ||||||||    
T  524469 gtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaaccaaat 524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6782881 - 6782818
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||| ||||||    
T  6782881 cctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 6782818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6783093 - 6783030
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||| ||||||    
T  6783093 cctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 6783030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 10338129 - 10338044
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgag---tgaaaaatgattctaatacatccgaaccaaatg 153  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||||||     ||||||||| | |||||||||||||||||||    
T  10338129 ttcggttggtaaaatcaaaaccacaaatcgaaccaaaccatgcggttgagcaaaaaaaaatgatccgaatacatccgaaccaaatg 10338044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39808646 - 39808709
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  39808646 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 39808709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 11834062 - 11833982
Alignment:
Q  76 ttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa-atgattctaatacatccgaaccaaatgca 155  Q
    |||| |||||||||||| |||||||||||||| ||||| ||||||| |||| |||||   |||||||||||||||||||||    
T  11834062 ttggtaaaatcaaaaccacaaaccgaaccaaatcatgcagttgagtaaaaacatgatatgaatacatccgaaccaaatgca 11833982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 27100209 - 27100147
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| || |||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  27100209 gtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaaccatacggttgagtaaaaaa 27100147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 27178094 - 27178156
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| || |||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  27178094 gtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaaccatacggttgagtaaaaaa 27178156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 8568150 - 8568061
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||| ||| |||||  |||||||||||| | | ||||||| ||||||||  ||||||||| | ||||||||||||||||||||    
T  8568150 gtttggttcggctggtaaaatttaaaccgcaaaccaagcaaaaccattcggttgagaaaaaaatgatccgaatacatccgaaccaaatgc 8568061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 30855572 - 30855665
Alignment:
Q  63 tagtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgca 155  Q
    ||||||| || |||||| ||||| ||||||||||||| |||||||||||| |||||| | | |||||||||  | |||||||||||||| ||||    
T  30855572 tagtttggtttggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgaataagaaaatgatttgattacatccgaaccaagtgca 30855665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 26956314 - 26956401
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaat 152  Q
    ||||||||||||||| ||||| |||| | |||||||| |||||||| |||||||||| ||||| |||||| ||||||||  ||||||||    
T  26956314 gtttgattcggttggtaaaat-aaaaacacaaaccgatccaaaccacgcggttgagtaaaaaagtgattcgaatacatctaaaccaaat 26956401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 29628695 - 29628783
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaat 152  Q
    ||||| ||||||||| ||||| |||| |||||||| ||||||||||||||||| ||  ||||| |||| | ||||||||| ||||||||    
T  29628695 gtttggttcggttggtaaaatgaaaatcgcaaaccaaaccaaaccatgcggttaaggaaaaaagtgatccgaatacatccaaaccaaat 29628783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39808513 - 39808553
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatg 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  39808513 cctctttataaactcttctcaagagtcttgtctatccgatg 39808553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9378848 - 9378785
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||| ||||||| || |||| ||||| ||||||    
T  9378848 cctctttataaactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaata 9378785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9379055 - 9378992
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||||||||||  | |||| ||||| ||||||    
T  9379055 cctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29252631 - 29252568
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||| ||| || |||| ||||| ||||||    
T  29252631 cctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaata 29252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47856040 - 47856095
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttt 56  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||||||| ||||    
T  47856040 cctctttataaactcttatcaagagtcttatctatccgatgtgggatttgggtttt 47856095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 11399603 - 11399689
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaa 150  Q
    ||||| ||||||| | ||||| ||||||||||||| || |||||||||||||||| | ||||| |||| | ||||||||| ||||||    
T  11399603 gtttggttcggttagtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgactaaaaaagtgatccgaatacatccaaaccaa 11399689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 6214298 - 6214347
Alignment:
Q  15 cttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  6214298 cttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 6214347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 8681937 - 8681876
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| |||| ||||||||||| |||||| |||||| || ||||||||||| |||||    
T  8681937 tctttataaactcttatcaagagtcttatctatctgatgtgggacttggatttttttcaata 8681876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 23396662 - 23396601
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| | |||||||||||||||| |||||||| |||| || |||||||||| ||||||    
T  23396662 tctttatatactcttctcaagagtcttatctatccgttgtgggacttggatttttcccaata 23396601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 29211220 - 29211139
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    |||||| ||||  ||||| ||||||| ||||||||||||||||||||| ||||| |||| | |||| |||| ||||||||||    
T  29211220 ggttggtaaaagtaaaactgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatatatccaaaccaaatgc 29211139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 830925 - 830881
Alignment:
Q  110 atgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||||||||||||||||||| ||||||||||| || |||||||    
T  830925 atgcggttgagtgaaaaatgatcctaatacatccaaatcaaatgc 830881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 1196105 - 1196061
Alignment:
Q  110 atgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||||||||||||||||||| ||||||||||| || |||||||    
T  1196105 atgcggttgagtgaaaaatgatcctaatacatccaaatcaaatgc 1196061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2179710 - 2179646
Alignment:
Q  1 cctctttataaattctt-ctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||| |||||||||||| ||||||||||||| || ||| |||||| ||||||    
T  2179710 cctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaata 2179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 4258056 - 4258112
Alignment:
Q  8 ataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||| |||| ||||||||||| |||||||||||||||| |||| ||||| ||||||    
T  4258056 ataaactcttatcaagagtcttatctatccgatgtgagacttgggtttttcccaata 4258112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31374820 - 31374764
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||||| ||||||||| |||||| ||||||||||||  || ||||||||||    
T  31374820 cctctttataaactcttctcaatagtcttatctatccgatgtaggacttggattttt 31374764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35866688 - 35866752
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||| || |||| ||||| |||||||    
T  35866688 cctctatataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaatag 35866752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 7697778 - 7697865
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaa 151  Q
    ||||| ||||||||| ||||||||||||||||| |  | |||||||||| |||||||  ||||||||| | |||| ||||||| ||||    
T  7697778 gtttggttcggttggtaaaatcaaaaccgcaaatcagatcaaaccatgcagttgagtaaaaaaatgatccgaataaatccgaatcaaa 7697865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 16565149 - 16565090
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| |||| ||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  16565149 tttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 16600513 - 16600572
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| |||| ||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  16600513 tttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 31011357 - 31011278
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaat 152  Q
    |||||| ||||| |||||| ||||||| ||||||||| |||||||||| | |||| |||   ||||||||||||||||||    
T  31011357 ggttggtaaaataaaaacctcaaaccgcaccaaaccacgcggttgagtaagaaaacgatctgaatacatccgaaccaaat 31011278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33834005 - 33833942
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||| ||  ||| ||||||||||||    
T  33834005 cctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaata 33833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43366462 - 43366399
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||  |||||||||| ||| || ||||||| ||||||||||||| ||||||    
T  43366462 cctctttataaactctcatcaagagtctcgtcaattcgatgtgggatttggatttttcccaata 43366399  T

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Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48114052 - 48113989
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| || |||| || || ||||||    
T  48114052 cctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggttattcccaata 48113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1661240 - 1661282
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||||| || |||||||||||||    
T  1661240 cctctttataaactcttctcaagagttttatctatccgatgtg 1661282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7135292 - 7135334
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  7135292 cctctttataaactcttctcaagagtcctatctatccgatgtg 7135334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 37376246 - 37376300
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttga 119  Q
    ||||| ||||||||| ||||| ||||||||||||| || |||||||||| |||||    
T  37376246 gtttggttcggttggtaaaatgaaaaccgcaaaccaaatcaaaccatgcagttga 37376300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 43202886 - 43202948
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| || |||||| ||||| |||||| |||||| |||||||||||||| |||||| |||||    
T  43202886 gtttggtttggttggtaaaataaaaaccacaaaccaaaccaaaccatgcgattgagtaaaaaa 43202948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 36874850 - 36874793
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaat 128  Q
    ||||||||||||||| ||||||||||||| ||| |||| ||||  |||||| ||||||    
T  36874850 ttcggttggcaaaataaaaaccgcaaaccaaactaaactatgcaattgagttaaaaat 36874793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 47484244 - 47484305
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa 126  Q
    ||||||||| ||||| ||||| |||||||||||  ||||||||||||  |||||||| ||||    
T  47484244 gtttgattcagttggtaaaataaaaaccgcaaaaagaaccaaaccatttggttgagtaaaaa 47484305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49040621 - 49040576
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||||||    
T  49040621 cctctatataaactcttatcaagagtcttatctatccgatgtgaga 49040576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 16564945 - 16564885
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||| |||| | ||||||||| ||||||||||||| || |||| ||||| |||||||    
T  16564945 tttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaatag 16564885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 16600717 - 16600777
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||| |||| | ||||||||| ||||||||||||| || |||| ||||| |||||||    
T  16600717 tttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaatag 16600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 20335097 - 20335149
Alignment:
Q  93 gcaaaccgaaccaaaccatgcggttgagtg-aaaaatgattctaatacatccg 144  Q
    ||||||||||||||||||| |||||||||| |||| |||||  ||||||||||    
T  20335097 gcaaaccgaaccaaaccatacggttgagtgtaaaattgatttgaatacatccg 20335149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 26208885 - 26208806
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||| ||||| ||| || ||||| |||||||||||||||||||||| |||| | || | ||||||| | ||||||||||    
T  26208885 ggttggtaaaataaaatccacaaactgaaccaaaccatgcggttgagt-aaaatttatccgaatacattcaaaccaaatgc 26208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 27456804 - 27456856
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggtt 117  Q
    ||||| ||||||||| ||||| ||||||||||||| || ||||| ||||||||    
T  27456804 gtttggttcggttgggaaaatgaaaaccgcaaaccaaagcaaactatgcggtt 27456856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 9686525 - 9686615
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||||||  ||||||||||| |||||||||||| |||||||    
T  9686525 gtttggttcggttggtaaaatcaaaaccgcaatccgaatcaaaccatgcggttgagtaaaaaaatgattcgaatacatccgaatcaaatgc 9686615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15101160 - 15101223
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  15101160 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 15101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16877059 - 16877125
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagtt 67  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| |||||||||    
T  16877059 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatagtt 16877125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 7169693 - 7169605
Alignment:
Q  64 agtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaacc-atgcggttgagt-gaaaaatgattctaatacatccgaaccaa 150  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||| |  ||||||||| | ||||||||||||||||    
T  7169693 agtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccaatgcggttgattaaaaaaatgatccgaatacatccgaaccaa 7169605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16590239 - 16590176
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||||||| |||||||||||||||||||||||| || |||| ||||| ||||||    
T  16590239 cctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16605141 - 16605204
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||||||| |||||||||||||||||||||||| || |||| ||||| ||||||    
T  16605141 cctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18494323 - 18494386
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  18494323 cctctttataaattattctcaagagtcttgtctatctgatgtgggatttgggtttttcccaata 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 29049028 - 29049099
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaa 151  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||| | |||||||||||| ||||    
T  29049028 aaaatcaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaaatgatccaaatacatccgaatcaaa 29049099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11313431 - 11313494
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||    
T  11313431 cctctttatatactcttctcaagagtcttatctatccgatgtgggatttgggtttttcccaata 11313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 11417521 - 11417583
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||||||||| |||| ||||||||||||||||||| ||||||| |||||||||| || |||||    
T  11417521 gtttgattcgattggtaaaatcaaaaccgcaaaccaaaccaaatcatgcggttgggtaaaaaa 11417583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 5269323 - 5269367
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  5269323 ctctttataaactcttctcaagagtcttatctatccgatgtgaga 5269367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 8064968 - 8065060
Alignment:
Q  63 tagtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||||| ||||||| | ||||| |||||| ||||||||||||| |||||  ||||||| ||||| |||| ||||||||||  ||||||||||    
T  8064968 tagtttggttcggtttgtaaaataaaaaccacaaaccgaaccaacccatgttgttgagtaaaaaagtgatcctaatacatcaaaaccaaatgc 8065060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16876879 - 16876935
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||||| | |||||||||||||||||||||| ||||| || ||||||||||    
T  16876879 cctctttataaactattctcaagagtcttgtctatcctatgtgggacttggattttt 16876935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 16970389 - 16970298
Alignment:
Q  64 agtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaa-aaatgattctaatacatccgaaccaaatgc 154  Q
    |||||| ||||||||| ||| |||||| ||||||||| |||||||||||  ||||||| || || |||| | ||||||||||||| ||||||    
T  16970389 agtttggttcggttggtaaagtcaaaatcgcaaaccggaccaaaccatgtagttgagtaaacaattgatccaaatacatccgaactaaatgc 16970298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 19134710 - 19134619
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgca 155  Q
    ||||| ||||||||| ||||| ||||| ||||||| ||||||||||| ||||||||  ||||| | || ||| ||||||| |||||||||||    
T  19134710 gtttggttcggttggtaaaatgaaaactgcaaaccaaaccaaaccatacggttgagaaaaaaagtaatcctagtacatccaaaccaaatgca 19134619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24558638 - 24558575
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| |||||| |||||| || |||||||||| ||||||    
T  24558638 cctctttatatactcttctcaagagtcttatctatctgatgtgggacttggatttttcccaata 24558575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24558843 - 24558780
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||||  | | ||||||||||||    
T  24558843 cctctttataaactcttctaaagagtcttatctatccgatgtgagacataggttttttccaata 24558780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 22414282 - 22414372
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa-atgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||| | ||||| |||||| |||| ||||||||||||||| ||||||| ||||  | || | ||||||||||||||||||||    
T  22414282 gtttggttcggttcgtaaaatgaaaaccacaaatcgaaccaaaccatgcagttgagtaaaaagtttatccaaatacatccgaaccaaatgc 22414372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 30753041 - 30753103
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||| ||||| |||||||||||| ||||||||| |||| ||||||| |||||    
T  30753041 gtttggttcggttggtaaaataaaaaccgcaaactgaaccaaactatgcagttgagtaaaaaa 30753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 6267491 - 6267536
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa 126  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  6267491 aaaataaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaa 6267536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 6623477 - 6623537
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  6623477 ctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 6623537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 891943 - 891857
Alignment:
Q  66 tttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt--gaaaaatgattctaatacatccgaaccaa 150  Q
    |||| ||||||| | ||||| |||| |||||||| ||||||||||||||||| |||   |||||||||  |||||||||| ||||||    
T  891943 tttggttcggttcgtaaaatgaaaagcgcaaaccaaaccaaaccatgcggtttagtaaaaaaaatgatcttaatacatccaaaccaa 891857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 4577579 - 4577654
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgca 155  Q
    ||||| ||||| ||||||||||||||||| ||||||| ||| ||||| |||| | ||| ||||| |||||||||||    
T  4577579 aaaataaaaactgcaaaccgaaccaaaccttgcggttaagtaaaaaagtgatccgaattcatccaaaccaaatgca 4577654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 13531878 - 13531823
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgag 120  Q
    ||||| || |||||| ||||| |||| |||||||| ||||||||||||||||||||    
T  13531878 gtttggtttggttggtaaaatgaaaatcgcaaaccaaaccaaaccatgcggttgag 13531823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26339891 - 26339933
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||| |||| |||||||||||||    
T  26339891 cctctttataaactcttctcaagattcttatctatccgatgtg 26339933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 24641322 - 24641285
Alignment:
Q  80 caaaatcaaaaccgcaaaccgaaccaaaccatgcggtt 117  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  24641322 caaaatcaaaactgcaaaccgaactaaaccatgcggtt 24641285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 19054546 - 19054506
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||| ||||||||||||| || |||||||||||||    
T  19054546 tctttataaactcttctcaagagtgttatctatccgatgtg 19054506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25998872 - 25998808
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| | || ||| ||||||| ||||||||||||| || |||| ||||| |||||||    
T  25998872 cctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaatag 25998808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 26098397 - 26098333
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| | || ||| ||||||| ||||||||||||| || |||| ||||| |||||||    
T  26098397 cctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaatag 26098333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28149848 - 28149784
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| |||| |||||||| || ||||||||||||| ||  ||| ||||| |||||||    
T  28149848 cctctttataaactcttatcaagagttttatctatccgatgtgggacatgggtttttcccaatag 28149784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 4280780 - 4280861
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||   ||||||||| ||||||||    
T  4280780 ttcggttggtaaaataaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaaatgatctgaatacatccaaaccaaat 4280861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22339796 - 22339732
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  22339796 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaatag 22339732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 45914801 - 45914727
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaa-aatgattctaatacatccgaaccaaatgc 154  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| | |||| | ||||||||||||||||||||    
T  45914801 aaaatcaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaatattgatccgaatacatccgaaccaaatgc 45914727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 54591517 - 54591577
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||| |||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  54591517 ctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 54591577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4191171 - 4191234
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  4191171 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 4191234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9264342 - 9264405
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  9264342 cctctttatatactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 9264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33798848 - 33798911
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  33798848 cctctttatatactcttcttaagagtcttgtctatccgatgtgggatttgggttttttccaata 33798911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 50692378 - 50692315
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  50692378 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54495586 - 54495523
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||||||||| ||||||    
T  54495586 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 54495523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 42362820 - 42362758
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  42362820 gtttgattcagttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaa 42362758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 55467238 - 55467148
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||| | ||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||   ||||||||| ||||||||||    
T  55467238 gtttggttcggttagtaaaatcaaaactgcaaaccgaaccaaaccatacggttgagtaaaaaattgatctgaatacatccaaaccaaatgc 55467148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22407697 - 22407761
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||| | ||||||| |||||||||||||||||||||| || |||||||||| |||||||    
T  22407697 cctctttatatactcttctcgagagtcttgtctatccgatgtgggacttggatttttcccaatag 22407761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 26758706 - 26758762
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt 121  Q
    ||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26758706 gtttggtttggttggtaaaatcaaaaccgcaaaccgaaccaaatcatgcggttgagt 26758762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39078820 - 39078884
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| ||||||||||||||||||||||||||| || || |||| ||||| |||||||    
T  39078820 cctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaatag 39078884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 51661967 - 51661883
Alignment:
Q  71 ttcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||||| | ||||| |||| | |||||||||||| |||||||    
T  51661967 ttcggttggtaaaacaaaaaccgcaaaccaaaccaaaccatgcggttgaataaaaaagtgatccgaatacatccgaatcaaatgc 51661883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5440632 - 5440569
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| ||||||||||||||||||||||||||||||  | |||| ||||| ||||||    
T  5440632 cctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 5440569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 8355810 - 8355901
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattct-aatacatccgaaccaaatgca 155  Q
    ||||||||||||||  ||||||||||| ||||||||||| |||||||| |||||||| |||||  | ||| ||||||| | |||||||||||    
T  8355810 gtttgattcggttgataaaatcaaaactgcaaaccgaactaaaccatgtggttgagtaaaaaaataatctaaatacattcaaaccaaatgca 8355901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 22255892 - 22255809
Alignment:
Q  72 tcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||||  |||||||||||||||||||||||||||| ||||| ||||||  ||||||||||| |||||||  |||| ||||||    
T  22255892 tcggttgataaaatcaaaaccgcaaaccgaaccaaactatgcgattgagtaaaaaaatgattcaaatacatttgaactaaatgc 22255809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 50692581 - 50692518
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||| ||||||||||||||||||||||||| || |||| ||||| ||||||    
T  50692581 cctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 52632608 - 52632699
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgca 155  Q
    ||||| || |||||| ||||| ||||||||||||| ||||||||||||| ||||||| ||||| ||||   ||||||||| |||||||||||    
T  52632608 gtttggtttggttggtaaaataaaaaccgcaaaccaaaccaaaccatgcagttgagtaaaaaagtgatatgaatacatccaaaccaaatgca 52632699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 2565902 - 2565840
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||| | ||||||| |||||    
T  2565902 gtttgttttggttggtaaaatcaaaaccgcaaaccgaaccaaaccatccagttgagtaaaaaa 2565840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 8557378 - 8557288
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| || |||||| ||||| |||| | |||||| ||||||||||||||||||||  | |||||||| ||| ||||||||||||||||||    
T  8557378 gtttggtttggttggtaaaatgaaaatcacaaaccaaaccaaaccatgcggttgagcaagaaaatgatcctattacatccgaaccaaatgc 8557288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 25918854 - 25918792
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  25918854 gtttggttcagttggtaaaatcaaaaccgcaaaccgaacaaaaccatgcagttgagtaaaaaa 25918792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 46253046 - 46252956
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||| | ||||| ||||||||||||||||||||||||| ||||||| | ||||| ||||   |||||||||||| |||||||    
T  46253046 gtttgcttcggttagtaaaattaaaaccgcaaaccgaaccaaaccatacggttgaataaaaaattgatctgaatacatccgaatcaaatgc 46252956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49477589 - 49477528
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaa 62  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||    
T  49477589 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 50203906 - 50203951
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  50203906 cctctttataaactcttctcaagagtcttatctatccgatgtgaga 50203951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 45629668 - 45629736
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatc 142  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||| |||| | ||||||||    
T  45629668 ggttggtaaaataaaaactgcaaatcgaaccaaaccatgcggttgagtaaaaattgatccgaatacatc 45629736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4029693 - 4029756
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || ||| ||| || ||||||    
T  4029693 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgcattattcccaata 4029756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9264135 - 9264198
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  9264135 cctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 9264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9264549 - 9264612
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  9264549 cctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 9264612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 21832250 - 21832293
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  21832250 tctttataaacttttctcaagagtcttgtctatccgatgtgaga 21832293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21832740 - 21832803
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||| ||||||| |||||||||||||||||||||||||||||| || |||   |||||||||||    
T  21832740 cctccttataaactcttctcaagagtcttgtctatccgatgtgggacttgagatttttccaata 21832803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 26366782 - 26366731
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttt 56  Q
    |||||||| |||||||||||||||||||||||||||||| || |||| ||||    
T  26366782 tttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 26366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37058820 - 37058883
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | ||||||||||||||||||||||| |||||| || |||| ||||| ||||||    
T  37058820 cctctttatatactcttctcaagagtcttgtctatctgatgtgggacttgggtttttcccaata 37058883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39956516 - 39956579
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||| |||| ||||||||||| |||||| || |||||||||| ||||||    
T  39956516 cctctttataaactcttcttaagattcttgtctatctgatgtgggacttggatttttcccaata 39956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39956723 - 39956782
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttcc 60  Q
    |||||||||||| ||||||||||||||||||||||| |||||| || |||  ||||||||    
T  39956723 cctctttataaactcttctcaagagtcttgtctatctgatgtgggacttgagttttttcc 39956782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42258965 - 42258902
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | ||||||||||| |||| ||||||||||||| || |||||||||| ||||||    
T  42258965 cctctttatatactcttctcaagaatcttatctatccgatgtgggacttggatttttcccaata 42258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44461343 - 44461280
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||||||||| |||| ||| || |||||||||| |||||||||  ||||||||||||    
T  44461343 cctctttataaattcttatcaatagttttatctatccgatatgagatttgagttttttccaata 44461280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 48169149 - 48169212
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaat 128  Q
    ||||| || |||||| ||||| |||||||||||||||||||||||||| |||| ||| ||||||    
T  48169149 gtttggtttggttggtaaaatgaaaaccgcaaaccgaaccaaaccatgtggttaagtaaaaaat 48169212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34992632 - 34992575
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttttt 58  Q
    |||||||||||| |||||||||||||||| |||||| |||||| || |||| ||||||    
T  34992632 cctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggtttttt 34992575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34992924 - 34992867
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttttt 58  Q
    |||||||||||| |||||||||||||||| |||||| |||||| || |||| ||||||    
T  34992924 cctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggtttttt 34992867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 48308521 - 48308570
Alignment:
Q  16 ttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||||||||||| ||||||| || |||||||||| |||||||    
T  48308521 ttctcaagagtcttgtctattcgatgtgggacttggatttttcccaatag 48308570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51338490 - 51338555
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagt 66  Q
    |||||||||| | |||||||||||||||| |||||| |||||| || |||| ||||| ||||||||    
T  51338490 cctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaatagt 51338555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5440667 - 5440631
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatcc 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5440667 cctctttataaactcttctcaagagtcttgtctatcc 5440631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 35358729 - 35358777
Alignment:
Q  16 ttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  35358729 ttctcaagagtcttatctatccaatgtgagacttgaattttttccaata 35358777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 38651641 - 38651553
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaat 152  Q
    ||||| ||| ||||| ||||| ||||||||||||| || |||||||||||||||||  | ||||||||   | ||||||||||||||||    
T  38651641 gtttggttcagttggtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgagcaagaaaatgatcggattacatccgaaccaaat 38651553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51642684 - 51642748
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgaga-tttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || ||||| ||||| ||||||    
T  51642684 cctctttatatactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaata 51642748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53640221 - 53640285
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||| | |||||||||||||||| |||||| |||||| || |||| ||||| |||||||    
T  53640221 cctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaatag 53640285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 10758821 - 10758880
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||| | |||||||||||||||| ||||||||||||| || |||  ||||||||||||    
T  10758821 tttatataatcttctcaagagtcttatctatccgatgtgggacttgagttttttccaata 10758880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 17144345 - 17144254
Alignment:
Q  64 agtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    |||||| || |||||  ||||| ||||||||||||| |||||||||||  |||||||| |||||  ||| | |||||||||||| |||||||    
T  17144345 agtttggtttggttgataaaataaaaaccgcaaaccaaaccaaaccatatggttgagtaaaaaagggatccgaatacatccgaatcaaatgc 17144254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22407490 - 22407553
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | ||||||| ||||| |||||||||||||||| || || ||||||| ||||||    
T  22407490 cctctttatatactcttctcgagagttttgtctatccgatgtgggacttagatttttcccaata 22407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29763745 - 29763792
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatt 48  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||||    
T  29763745 cctctttataaactcttatcaagagtcttatctatccgatgtgggatt 29763792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37223630 - 37223567
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||| ||||||| ||||||||||||| || || | ||||| ||||||    
T  37223630 cctctttataaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaata 37223567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40926758 - 40926695
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||| ||  | ||||||||||||||    
T  40926758 cctctatataaactcttatcaagagtcttatctatccgatgtgggacattgattttttccaata 40926695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 44651434 - 44651489
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgag 120  Q
    ||||| ||||||||| ||||| |||||| |||| | ||||||||||||||||||||    
T  44651434 gtttggttcggttggtaaaatgaaaaccacaaatcaaaccaaaccatgcggttgag 44651489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53640014 - 53640077
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||| ||||||||||| |||||||||| || || |||||||||| ||||||    
T  53640014 cctctttatatactcttgtcaagagtcttatctatccgatatgggacttggatttttcccaata 53640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 34185489 - 34185407
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgca 155  Q
    |||||| ||||| ||||  ||||||| |||| ||||||||||||||||  |||||||||   ||| |||||||||||||||||    
T  34185489 ggttggtaaaataaaaagtgcaaaccaaaccgaaccatgcggttgagtcaaaaaatgatctgaatgcatccgaaccaaatgca 34185407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54369094 - 54369052
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  54369094 cctctttataaactcttctcaagagtcctatctatccgatgtg 54369052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 35358520 - 35358565
Alignment:
Q  19 tcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  35358520 tcaagagtcttatctatctgatgtgagacttggatttttcccaata 35358565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 5640317 - 5640237
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatg 153  Q
    |||||| ||||| |||| | |||||| ||| ||||||||||||||||| | |||||||||  | |||||||||| ||||||    
T  5640317 ggttggtaaaatgaaaatcacaaaccaaactaaaccatgcggttgagtaagaaaatgatttgattacatccgaatcaaatg 5640237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 10481215 - 10481127
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaat 152  Q
    ||||| ||||||||  ||||| ||||||||||| | || |||||||| ||||||||| | ||| |||| | ||||||||| ||||||||    
T  10481215 gtttggttcggttgataaaataaaaaccgcaaatcaaatcaaaccatacggttgagtaataaagtgatccaaatacatccaaaccaaat 10481127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21833579 - 21833523
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||||| ||||||| |||||||||| ||||| ||||| || |||| |||||    
T  21833579 cctctttataaactcttctccagagtcttgtttatccaatgtgggacttgggttttt 21833523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39269555 - 39269499
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||| ||  |||||||||    
T  39269555 cctctatataaactcttatcaagagtcttatctatccgatgtgggacatggattttt 39269499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40927085 - 40927029
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    ||||| |||||| |||| ||||||||||| ||||||||||||| ||  |||||||||    
T  40927085 cctctatataaactcttatcaagagtcttatctatccgatgtgggacatggattttt 40927029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 11632484 - 11632423
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  11632484 tctttataaactcttctcaagagtcttgtctatccgatgtgggacttggattttttccaata 11632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 36568188 - 36568278
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||| ||||   |||||||| |||||||||||    
T  36568188 gtttggttcggttggtaaaatcaaaaccgcaaactgaaccaaaccatgtggttgagttaaaaattgatctgaatacatctgaaccaaatgc 36568278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 41455355 - 41455445
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||||| ||||||||| |||||||||||||| |||||||| ||||| ||||   ||||||||||||||||||||    
T  41455355 gtttggttcggttggtaaaatcataaccgcaaatcgaaccaaaccatgtggttgagtaaaaaattgatcagaatacatccgaaccaaatgc 41455445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 28224465 - 28224377
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaat 152  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||| |||| |||||||  ||||||||| | |||||||| |||||||||    
T  28224465 gtttggttcggttggtaaaatcaaaaccgcaaaccaaaccaaactatgcagttgagtaaaaaaatgatccgaatacatctgaaccaaat 28224377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48153 - 48216
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  48153 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 48216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28358084 - 28358147
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  28358084 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 28358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34457358 - 34457295
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  34457358 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 34457295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 43490513 - 43490576
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| |||||||    
T  43490513 ctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatag 43490576  T

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Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 15286895 - 15286843
Alignment:
Q  14 tcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatagt 66  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  15286895 tcttctcaagagtcttatctatccgatgtgagacttggatttttcccaatagt 15286843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 23418440 - 23418528
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaat 152  Q
    ||||| |||||| || ||||| |||||| ||||||||||||||||| |||||||||| | |||||||| | |||| |||||||||||||    
T  23418440 gtttggttcggtcggtaaaataaaaacctcaaaccgaaccaaaccacgcggttgagtaataaaatgatccgaatatatccgaaccaaat 23418528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2908611 - 2908674
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| | |||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  2908611 cctctttataaactattctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 2908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37656781 - 37656844
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| |||||||||||||||| |||  ||||||||||||    
T  37656781 cctctttatatactcttctcaagagtcttatctatccgatgtgagacttgagttttttccaata 37656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38376786 - 38376723
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  38376786 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43490305 - 43490368
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  43490305 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 42920176 - 42920086
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    |||||||||| || | ||||| ||||||||||| | |||||||||||||| |||||| ||||| |||||| ||||||| | ||||||||||    
T  42920176 gtttgattcgattcgtaaaataaaaaccgcaaatcaaaccaaaccatgcgcttgagtcaaaaagtgattcaaatacattcaaaccaaatgc 42920086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 691211 - 691122
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtga-aaaatgattctaatacatccgaaccaaatg 153  Q
    ||||| ||||||||| ||||| ||||||||||| | ||||||||||||||||||||  | |||||||| | | |||||||||| ||||||    
T  691211 gtttggttcggttggtaaaatgaaaaccgcaaatcaaaccaaaccatgcggttgagcaagaaaatgatccaattacatccgaatcaaatg 691122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34457151 - 34457094
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttttt 58  Q
    |||||||||||| ||||||||||||||||||||||||||| || || |||| ||||||    
T  34457151 cctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttt 34457094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 33901599 - 33901511
Alignment:
Q  67 ttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttg-agtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||| |||||| ||||| |||||||||||  ||| ||||||| ||||||| | | |||||| |||| ||||||||||||||||||||    
T  33901599 ttgattaggttggtaaaataaaaaccgcaaattgaatcaaaccacgcggttgaattaaaaaataattcgaatacatccgaaccaaatgc 33901511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2908818 - 2908881
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| | ||||||| ||||||||||||| |||||| || |||||||||| ||||||    
T  2908818 cctctttataaactattctcaaaagtcttgtctatctgatgtgggacttggatttttcccaata 2908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3762961 - 3762898
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||  ||| ||||| ||||||    
T  3762961 cctctttataaactcttctcaagagtcttatctatccgatgtgggacatgggtttttcccaata 3762898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 5127966 - 5128025
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| |||||||||||| ||||||||||||||||   | |||||||||||||||||    
T  5127966 tttataaactcttctcaagagccttgtctatccgatgtagaacttggattttttccaata 5128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30592483 - 30592428
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttt 56  Q
    |||||||||| | | |||||||||||||| |||||||||||||||| |||||||||    
T  30592483 cctctttatatacttttctcaagagtcttatctatccgatgtgagacttggatttt 30592428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 33793107 - 33793198
Alignment:
Q  64 agtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||||| || |||||  ||||||||||||||||||| || |||||||  |||||||||  |||||||||   ||||||||||||||||||||    
T  33793107 agtttggtttggttgataaaatcaaaaccgcaaaccaaatcaaaccacacggttgagtaaaaaaatgatctgaatacatccgaaccaaatgc 33793198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35527037 - 35527092
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggatttt 56  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||    
T  35527037 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37781893 - 37781956
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| |||||||||||||||| |||  ||||| ||||||    
T  37781893 cctctttatatactcttctcaagagtcttatctatccgatgtgagacttgagtttttcccaata 37781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 2423285 - 2423347
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||| ||||| ||||||||||| | |||||||||||| ||||||| ||||||    
T  2423285 gtttggttcggttggtaaaatgaaaaccgcaaatcaaaccaaaccatgtggttgagggaaaaa 2423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 5175241 - 5175152
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| || |||||| |||||||||||  |||||| |||||||||| | |||||||| ||||| |||| | ||||||||||||||||||||    
T  5175241 gtttggtttggttggtaaaatcaaaaca-caaaccaaaccaaaccacgtggttgagtaaaaaaatgatccaaatacatccgaaccaaatgc 5175152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15510553 - 15510595
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  15510553 cctctttataaactcttctcaagagtcgtgtctatccgatgtg 15510595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 23623484 - 23623546
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||| |  |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  23623484 gtttggttcggtttgtcaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaa 23623546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 25495574 - 25495635
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||| ||||| |||||||||||  |||||||||||||||||||||| |||||    
T  25495574 gtttggttcggttggtaaaattaaaaccgcaaat-gaaccaaaccatgcggttgagtaaaaaa 25495635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 34087835 - 34087897
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| || |||||| ||||||||||| |||||||||||||||||| |||||| ||| |||||    
T  34087835 gtttggtttggttggtaaaatcaaaactgcaaaccgaaccaaaccacgcggttaagtaaaaaa 34087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 42920629 - 42920555
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||||||| |||||||||||||| |||||| ||||| |||||| ||||||| | || |||||||    
T  42920629 aaaataaaaaccgcaaaccaaaccaaaccatgcgcttgagtcaaaaagtgattcaaatacattcaaatcaaatgc 42920555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 6633787 - 6633848
Alignment:
Q  66 tttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||| ||||||| | ||||| ||||||||||||| ||||||||||||  |||||||||||||    
T  6633787 tttggttcggttcgtaaaatgaaaaccgcaaaccaaaccaaaccatgtagttgagtgaaaaa 6633848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 15216622 - 15216553
Alignment:
Q  87 aaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgca 155  Q
    |||||||||||||||||| |||||   |||||||| ||||| |||| | |||||||||||||||||||||    
T  15216622 aaaaccgcaaaccgaaccgaaccacatggttgagtaaaaaaatgatccgaatacatccgaaccaaatgca 15216553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 18432572 - 18432661
Alignment:
Q  66 tttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    |||| ||||||||  ||||| ||||||||||||| |||||||| |||||||||| |  |||||| |||| ||||||||| || |||||||    
T  18432572 tttggttcggttgataaaataaaaaccgcaaaccaaaccaaactatgcggttgaatacaaaaataattcaaatacatccaaatcaaatgc 18432661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30870934 - 30870990
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||||| ||||||||||| |||| |||||||||||||  |||||| |||||    
T  30870934 cctctttataaactcttctcaagaatcttatctatccgatgtggaatttgggttttt 30870990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 6595409 - 6595464
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgag 120  Q
    ||||| || |||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  6595409 gtttggtttggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcagttgag 6595464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13413639 - 13413576
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| |||||  |||||| || |||| ||||| ||||||    
T  13413639 cctctttataaactcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaata 13413576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18107888 - 18107825
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||||||||| ||||||||||| || || ||||||| || |||| ||||| ||||||    
T  18107888 cctctttataaattcttatcaagagtcttatcgattcgatgtgggaattgggtttttcccaata 18107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 18914214 - 18914273
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| | ||||||||||||||| |||||||||||| || |||| ||||| ||||||    
T  18914214 tttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaata 18914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 18914421 - 18914480
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| | ||||||||||||||| |||||||||||| || |||| ||||| ||||||    
T  18914421 tttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaata 18914480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 22732787 - 22732842
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    ||||||||||| |||  ||| ||||||  |||||||||||||||||||||||||||    
T  22732787 ctctttataaactctcatcaggagtctcatctatccgatgtgagatttggattttt 22732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24125117 - 24125054
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||||| ||||||||||  || |||| ||||| ||||||    
T  24125117 cctctttatatactcttctcaagagtcttgtttatccgatgtaggacttgggtttttcccaata 24125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36307972 - 36308034
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||| ||||||||||| |||||||||||||  | ||| |||||||||||||    
T  36307972 cctctttataaactctt-tcaagagtcttatctatccgatgtggaacttgaattttttccaata 36308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 39268069 - 39268010
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| |||| ||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  39268069 tttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39268010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 2796432 - 2796370
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||||||| |||||| ||||| |||||| ||||| ||| |||||||||||||| ||| |||||    
T  2796432 gtttgatttggttggtaaaataaaaaccacaaactgaaacaaaccatgcggttaagtaaaaaa 2796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 2802593 - 2802531
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||||||| |||||| ||||| |||||| ||||| ||| |||||||||||||| ||| |||||    
T  2802593 gtttgatttggttggtaaaataaaaaccacaaactgaaacaaaccatgcggttaagtaaaaaa 2802531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 15510708 - 15510746
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  15510708 tttataaactcttctcaagagtcatgtctatccgatgtg 15510746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22196602 - 22196644
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  22196602 cctctttataaactcttctcaagagtcatatctatccgatgtg 22196644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 22553839 - 22553920
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaac 147  Q
    ||||| || |||||| ||||| |||| |||||||||||| |||| ||| |||||||| ||||| ||| | |||||||||||||    
T  22553839 gtttggtttggttggtaaaat-aaaatcgcaaaccgaacaaaactatggggttgagtaaaaaacgatccaaatacatccgaac 22553920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 22747181 - 22747135
Alignment:
Q  82 aaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaat 128  Q
    |||| |||||||||||||||| |||||||||||||||| | ||||||    
T  22747181 aaataaaaaccgcaaaccgaatcaaaccatgcggttgaataaaaaat 22747135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38131819 - 38131777
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  38131819 cctctttataaactcttctcaagagtcctatctatccgatgtg 38131777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39668466 - 39668508
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  39668466 cctctttataaattcttctcaagaatcatatctatccgatgtg 39668508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 19402724 - 19402777
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||||| ||||| ||||||||||||  ||||||||| ||||||||||| |||||    
T  19402724 ggttggtaaaataaaaaccgcaaacataaccaaaccgtgcggttgagtaaaaaa 19402777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 26690285 - 26690330
Alignment:
Q  82 aaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||| ||||| |||||| |||||||||||||||||||||| |||||    
T  26690285 aaataaaaactgcaaactgaaccaaaccatgcggttgagtaaaaaa 26690330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 26960017 - 26960062
Alignment:
Q  82 aaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    |||| ||||| |||||| |||||||||||||||||||||| |||||    
T  26960017 aaataaaaactgcaaactgaaccaaaccatgcggttgagtaaaaaa 26960062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 32501262 - 32501205
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaa 62  Q
    |||| ||| |||| ||||||||||| ||||||||||||| || |||||||||| ||||    
T  32501262 tttacaaactcttatcaagagtcttatctatccgatgtgggacttggatttttcccaa 32501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 2589481 - 2589533
Alignment:
Q  75 gttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||| ||||| | |||||||||||||||||||||| |||| |||||    
T  2589481 gttggtaaaataaaaactggaaaccgaaccaaaccatgcggtagagtaaaaaa 2589533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 6719054 - 6719106
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa 126  Q
    |||||| ||||| |||| ||||||||||||||||||||| || ||||| ||||    
T  6719054 ggttggtaaaataaaaaacgcaaaccgaaccaaaccatgtggctgagtaaaaa 6719106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40169090 - 40169146
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    |||||||||| | |||||||||||||||| |||||| |||||| || |||| |||||    
T  40169090 cctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggttttt 40169146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 40331088 - 40331004
Alignment:
Q  63 tagtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaa 146  Q
    ||||||||||| ||||| ||||| |||||| |||||||||  |||| || | |||||||  ||||||||| | ||||||||||||    
T  40331088 tagtttgattctgttggtaaaataaaaaccacaaaccgaattaaactatacagttgagtaaaaaaatgatccaaatacatccgaa 40331004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34775412 - 34775349
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  34775412 cctctttataaattcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 34775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6986465 - 6986529
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaatag 65  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||||||||| |||||||    
T  6986465 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaatag 6986529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 12884855 - 12884946
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt--gaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||| ||||| |||||||||||| ||||||||||||||||||||| ||||||   ||||||||| | |||||||| |||||||||||    
T  12884855 gtttggttcagttggtaaaatcaaaaccccaaaccgaaccaaaccatgcgattgagtaaaaaaaatgatccgaatacatctgaaccaaatgc 12884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12432160 - 12432097
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| ||||||||||| |||| ||||||||||||| || |||||||||||||||||    
T  12432160 cctctttataaactcttctcaagattcttatctatccgatgtgggacttggattttttccaata 12432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19859980 - 19859917
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  19859980 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 19859917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19860092 - 19860029
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  19860092 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 19860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20999038 - 20999101
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  20999038 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 20999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27545165 - 27545228
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||  ||||||||||||||||    
T  27545165 cctctttataaactcttctcaagagtcttatctatccgatgtgggacatggattttttccaata 27545228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 5862266 - 5862176
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||| ||||| || |   ||||||||||||||||||||    
T  5862266 gtttggtttggttggtaaaatcaaaaccacaaaccgaaccaaaacatgcggttgagtaaaaaagtgctctgaatacatccgaaccaaatgc 5862176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 12041202 - 12041112
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| || |||||| ||||| ||||||||||||| |||||||| |||||||||||| ||||| |||| | ||||||||| ||||||||||    
T  12041202 gtttggtttggttggtaaaatgaaaaccgcaaaccaaaccaaactatgcggttgagtaaaaaagtgatccgaatacatccaaaccaaatgc 12041112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 29695389 - 29695451
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||| ||||||    
T  29695389 ctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 29695451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 41166636 - 41166698
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||    
T  41166636 gtttggttcggttggtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgagtgaaaaa 41166698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 29172157 - 29172246
Alignment:
Q  63 tagtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    ||||||| ||| ||||| |||||||||||  |||||| || |||||||||||||||||| |||||||| |  |||||||||||| |||||    
T  29172157 tagtttggttcagttggtaaaatcaaaacttcaaaccaaatcaaaccatgcggttgagtaaaaaatgactagaatacatccgaatcaaat 29172246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 883650 - 883713
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  883650 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3435535 - 3435598
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| || ||| |||||||||||||    
T  3435535 cctctgtataaactcttctcaagagtcttatctatccgatgtgggacttgaattttttccaata 3435598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12419893 - 12419830
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  12419893 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 12419830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12431953 - 12431890
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  12431953 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 12431890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16007032 - 16006969
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||||||||||||||||| || |||| ||||| ||||||    
T  16007032 cctctttatatactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16006969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25621334 - 25621397
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| |||||||||||||||| |||| ||||| ||||||    
T  25621334 cctctttatatactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 25621397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 17727458 - 17727396
Alignment:
Q  2 ctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  17727458 ctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 17727396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 11695939 - 11696024
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaacca 149  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||| |||  ||| ||||| |||| | ||||||| |||||||    
T  11695939 gtttggtttggttggtaaaatcaaaaccgcaaaccgaaccaaaccatgtggtcaagtaaaaaattgatacgaatacattcgaacca 11696024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 11678461 - 11678512
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggt 116  Q
    ||||| || |||||| ||||||||||||||||||| ||||||||||||||||    
T  11678461 gtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaaccatgcggt 11678512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18607302 - 18607365
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||| |||||||||||||||||||||||||| |||  ||||| ||||||    
T  18607302 cctctttatatactcttcttaagagtcttgtctatccgatgtgagacttgtgtttttcccaata 18607365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21734471 - 21734408
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| ||| ||| ||||| ||||||    
T  21734471 cctctttatatactcttctcaagagtcttatctatccgatgtgggatgtgggtttttcccaata 21734408  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33986024 - 33986087
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  33986024 cctctttatatactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaata 33986087  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 27301087 - 27301013
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||||||| ||||||||||||||||||||  ||||| |||| | ||||||||| || |||||||    
T  27301087 aaaatgaaaaccgcaaaccaaaccaaaccatgcggttgaggaaaaaagtgatccgaatacatccaaatcaaatgc 27301013  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 36500218 - 36500136
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagt-gaaaaatgattctaatacatccgaaccaaatgca 155  Q
    |||||| ||||| ||||||| ||||| |||||||| ||||||||||||  ||||||||| | ||||||||| ||| |||||||    
T  36500218 ggttggtaaaataaaaaccgaaaaccaaaccaaactatgcggttgagtaaaaaaatgatccgaatacatccaaacaaaatgca 36500136  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 883902 - 883849
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttt 57  Q
    ||||||||| ||||||||||||||||||||||||||| || || |||| |||||    
T  883902 ctttataaactcttctcaagagtcttgtctatccgatatgggacttgggttttt 883849  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 13839310 - 13839351
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtga 44  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  13839310 tctttagaaactcttctcaagagtcttgtctatccgatgtga 13839351  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 43688472 - 43688517
Alignment:
Q  3 tctttataaattcttctcaagagtcttgtctatccgatgtgagatt 48  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||    
T  43688472 tctttataaactcttctcaagagtcctatctatccgatgtgagatt 43688517  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 11377263 - 11377175
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaat 152  Q
    |||||||||| |||| ||||| |||| || |||| ||| ||||| || ||||||||| ||||| |||| | ||||||||||||||||||    
T  11377263 gtttgattcgattggtaaaataaaaatcgtaaactgaatcaaactatacggttgagtaaaaaagtgatccgaatacatccgaaccaaat 11377175  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 884112 - 884049
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | |||||||||||||||  ||||||||||||| || |||| ||||| ||||||    
T  884112 cctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaata 884049  T

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Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7257657 - 7257720
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| | |||||||||||||| |||||||||| || || || ||||||| ||||||    
T  7257657 cctctttataaactattctcaagagtcttatctatccgatatgggacttagatttttcccaata 7257720  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 28790926 - 28790977
Alignment:
Q  67 ttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttg 118  Q
    |||||| |||||| ||||| ||||||||||||||||||||| ||| ||||||    
T  28790926 ttgatttggttggtaaaataaaaaccgcaaaccgaaccaaatcatacggttg 28790977  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 29101801 - 29101742
Alignment:
Q  5 tttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||| |||||||||| ||||||||||||||||||| || |||  |||||| |||||    
T  29101801 tttataaactcttctcaagtgtcttgtctatccgatgtgggacttgagtttttttcaata 29101742  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29684066 - 29684003
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||| | ||||||||||||||||||||||| |||| | || |||| ||||| ||||||    
T  29684066 cctctttatatactcttctcaagagtcttgtctatctgatgcgggacttgggtttttcccaata 29684003  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 15320185 - 15320139
Alignment:
Q  81 aaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa 127  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||||    
T  15320185 aaaataaaaaccgcaaaccaaaccaaaccatgtggttgagtaaaaaa 15320139  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18901913 - 18901955
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| |||| ||||||||||| |||||||||||||    
T  18901913 cctctttataaactcttttcaagagtcttatctatccgatgtg 18901955  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 32975306 - 32975272
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctat 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  32975306 cctctttataaattcttctcaagagtcttatctat 32975272  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 33985831 - 33985881
Alignment:
Q  14 tcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  33985831 tcttctcaagagtcttatctatccgatgtgggacttgggtttttgccaata 33985881  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 936867 - 936822
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgaga 46  Q
    |||||||||||| ||||||||||| || | ||||||||||||||||    
T  936867 cctctttataaactcttctcaagattcctatctatccgatgtgaga 936822  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 13194384 - 13194445
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaa 126  Q
    ||||||||||||  | ||||| ||||||||||| | |||||||||||| |||||||| ||||    
T  13194384 gtttgattcggtccgtaaaataaaaaccgcaaatcaaaccaaaccatgtggttgagtaaaaa 13194445  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 10570987 - 10570927
Alignment:
Q  4 ctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    ||||||| | |||||||||||||||| |||||| |||||| || |||| ||||| ||||||    
T  10570987 ctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 10570927  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 44085971 - 44086023
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggtt 117  Q
    ||||| |||||||||  |||| |||||| |||||| |||||||||||||||||    
T  44085971 gtttggttcggttggtgaaatgaaaaccacaaaccaaaccaaaccatgcggtt 44086023  T

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Target: scaffold0989 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2996 - 3058
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaat 63  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| ||||| |||||    
T  2996 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 3058  T

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Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 26342 - 26432
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaa-tgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||  ||||| |||| | ||||||||| ||| ||||||    
T  26342 gtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaactaaatgc 26432  T

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Target: scaffold0204; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 15001 - 15090
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaatgc 154  Q
    ||||| ||||||||| ||||| ||||||||| ||| |||||||| |||||||||||| |||| ||||   ||||||||| ||||||||||    
T  15001 gtttggttcggttggtaaaatgaaaaccgcagaccaaaccaaactatgcggttgagtaaaaagtgatctgaatacatccaaaccaaatgc 15090  T

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Target: scaffold0434 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13568 - 13505
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttccaata 64  Q
    |||||||||||| ||||||||||||||||||||||||||| || || |||| ||||| ||||||    
T  13568 cctctttataaactcttctcaagagtcttgtctatccgatttgggacttgggtttttcccaata 13505  T

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Target: scaffold0434; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13361 - 13319
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtg 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  13361 cctctttataaactcttctcaagagtcttgtctatccgatgtg 13319  T

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Target: scaffold0054 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21312 - 21371
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttcc 60  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||| | ||||||    
T  21312 cctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtattttcc 21371  T

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Target: scaffold0029 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 76907 - 76848
Alignment:
Q  1 cctctttataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttcc 60  Q
    |||||||||||| |||||||||||||||| ||||||||||||| || |||| ||||||||    
T  76907 cctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggttttttcc 76848  T

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Target: scaffold0210 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 18991 - 18913
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    |||||| ||||||||| ||||||||| ||||||||||||  ||||||| ||||| ||| | ||||||||| ||||||||    
T  18991 ggttggtaaaatcaaagccgcaaaccaaaccaaaccatgtagttgagtaaaaaacgatccaaatacatccaaaccaaat 18913  T

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Target: scaffold0210; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 26883 - 26805
Alignment:
Q  74 ggttggcaaaatcaaaaccgcaaaccgaaccaaaccatgcggttgagtgaaaaatgattctaatacatccgaaccaaat 152  Q
    |||||| ||||||||| ||||||||| ||||||||||||  ||||||| ||||| ||| | ||||||||| ||||||||    
T  26883 ggttggtaaaatcaaagccgcaaaccaaaccaaaccatgtagttgagtaaaaaacgatccaaatacatccaaaccaaat 26805  T

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Target: scaffold0688 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 1660 - 1707
Alignment:
Q  65 gtttgattcggttggcaaaatcaaaaccgcaaaccgaaccaaaccatg 112  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  1660 gtttgattcggttggtaaaataaaaaccgcaaaccaaaccaaaccatg 1707  T

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Target: scaffold1138 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 1928 - 1980
Alignment:
Q  7 tataaattcttctcaagagtcttgtctatccgatgtgagatttggattttttc 59  Q
    |||||| |||| ||||||||||| |||||||||||||||| |||| |||||||    
T  1928 tataaactcttatcaagagtcttatctatccgatgtgagacttgggttttttc 1980  T

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