View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10602_low_76 (Length: 241)
Name: NF10602_low_76
Description: NF10602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10602_low_76 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 23175480 - 23175256
Alignment:
| Q |
1 |
tattagtaataagagaataaaaaggggttcatgaagaaaacagatatatgcatgtatcattctgctaagcctcacatgaaaaacacatatagccttttgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23175480 |
tattagtaataagagaataaaaaggggttcatgaagaaaacacatatatgtatgtatcattctgctaagcctcacatgaaaaacacatatagccttttgg |
23175381 |
T |
|
| Q |
101 |
tttagaagcaagatgcatataagccattgcttgaaacccttgtcatgcacaggaagaatatggcttatttctgaaaactacacaattattacaagatttc |
200 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23175380 |
tttagaagcaagatgcatataagccattgcttgaaacccttgtcatgcataggaagaatatggcttatttctgaaaactacacaattattacaagatttc |
23175281 |
T |
|
| Q |
201 |
ccctaaaaaataatagctggtagtg |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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|
| T |
23175280 |
ccctaaaaaataatagctggtagtg |
23175256 |
T |
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