View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10603_4 (Length: 502)
Name: NF10603_4
Description: NF10603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10603_4 |
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Alignment Details
Target: chr4 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 26 - 474
Target Start/End: Complemental strand, 47645114 - 47644665
Alignment:
| Q |
26 |
tcagacaaaccaagaaaagcacatggaatgatatgtggattcgtgatttatttggtagtagtgttgtttcctataaattattgatattgtcgtgtttgtg |
125 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
47645114 |
tcagacaaaccaagaaaagcacatggaatgatatgtggattcgtgatttatttggtagtaatgttgtttcctataaattattgatattgtcgtgtttgtg |
47645015 |
T |
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| Q |
126 |
cccgtgaacttgaagtcactgtctcattggatgtcaatgtctacgttttgcaggtgaatggattgaggaatatatggttgaaatcgacatgagaggatgt |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47645014 |
cccgtgaacttgaagtcactgtctcattggatgtcaatgtctacgttttgcaggtgaatggattgaggaatatatggttgaaatcgacatgagaggatgt |
47644915 |
T |
|
| Q |
226 |
cgagccatnnnnnnnnnnnnnnnnggattgttgtttgtttggctattaattatttgtaaaaccatttgtttttaattgagatcaatgttgcatgtatgtt |
325 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47644914 |
cgagccattctctctcttctctctggattgttgtttgtttggctattaattatttgtaaaaccatttgtttttaattgagatcaatgttgcatgtatgtt |
47644815 |
T |
|
| Q |
326 |
taatcttaggcaagtaaagttgcagcaaacatgcttctatgtaaccttttaaaattattcatttcatttgtgttttggtgaatattgaactgattcgagc |
425 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47644814 |
taatcttaggcaagtaaagttgcagcaaacatgcttctatgtaaccttttaaaattattcatttcatttgtgttttggtgaatattgaactgattcgagc |
47644715 |
T |
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| Q |
426 |
ttctagtattatat-tattatttgtttcaatcggggatcatacacctgct |
474 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
47644714 |
ttctagtattatatatattatttgtttcaatcggggatcatacacctgct |
47644665 |
T |
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