View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10603_8 (Length: 421)
Name: NF10603_8
Description: NF10603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10603_8 |
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Alignment Details
Target: chr3 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Complemental strand, 45107247 - 45106839
Alignment:
| Q |
1 |
acaagcacaatgaaggtagaatatggattttggagatcatcatattcaggatcaacacttgagacttctctgtttgttttatttacgggttattttttaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
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| T |
45107247 |
acaagcacaatgaaggtagaatatggattttggagatcatcatattcaggatcaacacttgagacttctttgtttgttttatttactggttattttttaa |
45107148 |
T |
|
| Q |
101 |
aaatggtagcatgctttctatcttcactcattttcaacatgcctttaaaggatggtatctcccttgccctacttttgaactgcaaaggtgttgtggaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45107147 |
aaatggtagcatgctttctatcttcactcattttcaacatgcctttaaaggatggtatctcccttgccctacttttgaactgcaaaggtgttgtggaagt |
45107048 |
T |
|
| Q |
201 |
aaacatgtactctaccgcattggatagaaatgtaagtactaaaatctctccccttcatcacacacattttctagggaaaaaattgaattaaccgtagaaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45107047 |
aaacatgtactctaccgcattggatagaaatgtatgtactaaaatctctccccttcatcacacacattttctagggaaaaaattgaattaaccgtagaaa |
45106948 |
T |
|
| Q |
301 |
ttgagtatgcttttatttttaattttctgttcttgatcaaatatacttttgaatgcaggatatccgtccgaaaatatattgtgtggttatattcataatc |
400 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45106947 |
ttgagtatgcttttattttaaattttctgttcttgatcaaatatacttatgaatgcaggatatccgtccgaaaatatattgtgtggttatattcataatc |
45106848 |
T |
|
| Q |
401 |
atggtttca |
409 |
Q |
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| T |
45106847 |
atggtttca |
45106839 |
T |
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